E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L064381
BDB064381
BDBM50631622
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)N1CCC(c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)CC1)c1nnc(C)n1-2
C37H36ClN7O4S
710.260000
WXSOTMXNHJTFKS-XLTVJXRZSA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50631622
Local ready
Direct docking supported
E3L064382
BDB064382
GSPT1 degrader-3
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCN1CCC(c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)CC1)c1nnc(C)n1-2
C39H41ClN8O4S
753.329000
DQGNINFYAAEZKL-FSRLHOSWSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM50631623; PubChem:CID170453132
Local ready
Direct docking supported
E3L064383
BDB064383
BDBM50631624
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCN1CCC(c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)CC1)c1nnc(C)n1-2
C40H43ClN8O4S
767.356000
ZCOPIRBPZIGHDU-CYZZXXEPSA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50631624
Local ready
Direct docking supported
E3L064384
BDB064384
BDBM50631625
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCCN1CCC(c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)CC1)c1nnc(C)n1-2
C41H45ClN8O4S
781.383000
FOTJPEPDXXOTQF-JEFWXSHNSA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50631625
Local ready
Direct docking supported
E3L064385
BDB064385
BDBM50631626
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCCCN1CCC(c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)CC1)c1nnc(C)n1-2
C42H47ClN8O4S
795.410000
OJBZGRZGVKAUHH-CDRRMRQFSA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50631626
Local ready
Direct docking supported
E3L064386
BDB064386
BDBM50631627
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCCCCN1CCC(c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)CC1)c1nnc(C)n1-2
C43H49ClN8O4S
809.437000
OKISKGIPUPRZPL-SFCXHYMASA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50631627
Local ready
Direct docking supported
E3L064387
BDB064387
BDBM50631628
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)Nc1ccc(Cc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)cc1)c1nnc(C)n1-2
C39H34ClN7O4S
732.266000
NAJLKAMZDMZECA-FSRLHOSWSA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50631628
Local ready
Direct docking supported
E3L064388
BDB064388
BDBM50631629
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCNc1ccc(Cc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)cc1)c1nnc(C)n1-2
C41H39ClN8O4S
775.335000
SGHSUUSYNYZHKK-JEFWXSHNSA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50631629
Local ready
Direct docking supported
E3L064389
BDB064389
BDBM50631630
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCNc1ccc(Cc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)cc1)c1nnc(C)n1-2
C42H41ClN8O4S
789.362000
BNZBBHXKCFPTND-CDRRMRQFSA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50631630
Local ready
Direct docking supported
E3L064390
BDB064390
BDBM50631631
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCCNc1ccc(Cc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)cc1)c1nnc(C)n1-2
C43H43ClN8O4S
803.389000
MFAVXSAHTAKLRF-SFCXHYMASA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50631631
Local ready
Direct docking supported
E3L064391
BDB064391
BDBM50631632
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCCCNc1ccc(Cc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)cc1)c1nnc(C)n1-2
C44H45ClN8O4S
817.416000
GUKINEBETXGZNQ-TYIYNAFKSA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50631632
Local ready
Direct docking supported
E3L064392
BDB064392
BDBM50631633
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCCCCNc1ccc(Cc3ccc4c(c3)C(=O)N(C3CCC(=O)NC3=O)C4)cc1)c1nnc(C)n1-2
C45H47ClN8O4S
831.443000
JCFHQNJZGSNYNS-NWDJCJOJSA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50631633
Local ready
Direct docking supported
E3L064393
BDB064393
BDBM50631634
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCN1CCC3(CCC(c4ccc5c(c4)CN(C4CCC(=O)NC4=O)C5=O)CC3)CC1)c1nnc(C)n1-2
C44H49ClN8O4S
821.448000
ZKMPZGMDXOECHS-SFCXHYMASA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50631634
Local ready
Direct docking supported
E3L064394
BDB064394
BDBM50631635
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCN1CC3(CCC(c4ccc5c(c4)CN(C4CCC(=O)NC4=O)C5=O)CC3)C1)c1nnc(C)n1-2
C42H45ClN8O4S
793.394000
JFSVSFBLGUFRRC-JEFWXSHNSA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50631635
Local ready
Direct docking supported
E3L064395
BDB064395
BDBM50631636
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCN1CC(N3CCC(c4ccc5c(c4)CN(C4CCC(=O)NC4=O)C5=O)CC3)C1)c1nnc(C)n1-2
C42H46ClN9O4S
808.409000
LHUVKOFLIPGEIS-CDRRMRQFSA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50631636
Local ready
Direct docking supported
E3L064396
BDB064396
N-(2,6-dioxopiperidin-3-yl)-2-phenylacetamide
O=C1CCC(NC(=O)Cc2ccccc2)C(=O)N1
C13H14N2O3
246.266000
OQGRFQCUGLKSAV-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM50631797; PubChem:CID157096
Local ready
Direct docking supported
E3L064397
BDB064397
Pyroglutamylbenzylamide
O=C1CC[C@@H](C(=O)NCc2ccccc2)N1
C12H14N2O2
218.256000
MDCKMKIRZIXFCH-JTQLQIEISA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM50631798; PubChem:CID137348
Local ready
Direct docking supported
E3L064398
BDB064398
N-benzyl-5-oxo-D-prolinamide
O=C1CC[C@H](C(=O)NCc2ccccc2)N1
C12H14N2O2
218.256000
MDCKMKIRZIXFCH-SNVBAGLBSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM50631799; PubChem:CID7034154
Local ready
Direct docking supported
E3L064399
BDB064399
BDBM50631800
CN1C(=O)CCC(N2Cc3ccc(S(=O)(=O)F)cc3C2=O)C1=O
C14H13FN2O5S
340.332000
AMHYHMMSUWYWOK-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM50631800; PubChem:CID172451463
Local ready
Direct docking supported
E3L064400
BDB064400
BDBM50631802
O=C1CCC(NC(=O)Cc2cccc(S(=O)(=O)F)c2)C(=O)N1
C13H13FN2O5S
328.321000
LWEWTHYJTCCIIF-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM50631802; PubChem:CID172440969
Local ready
Direct docking supported