E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L064961
BDB064961
BDBM50642863
Cc1nnc(Cn2cc(C(F)(F)F)cc(-c3cccc([C@]4(c5nncn5C)C[C@@H](C)C4)c3)c2=O)o1
C24H23F3N6O2
484.482000
KHBYLZJKYMHXJH-GPCKLQJOSA-N P22681, Q13191 E3 ubiquitin-protein ligase CBL-B, E3 ubiquitin-protein ligase CBL
BindingDB
BindingDB:BDBM50642863
Local ready
Direct docking supported
E3L064962
BDB064962
BDBM50642864
C[C@H](c1cnn(C)c1)n1cc(C(F)(F)F)cc(-c2cccc([C@]3(c4nncn4C)C[C@@H](C)C3)c2)c1=O
C26H27F3N6O
496.537000
QRNMXYQPWPALPI-BFIDETRKSA-N P22681, Q13191 E3 ubiquitin-protein ligase CBL, E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM50642864
Local ready
Direct docking supported
E3L064963
BDB064963
BDBM50642865
C[C@@H](c1cnn(C)c1)n1cc(C(F)(F)F)cc(-c2cccc([C@]3(c4nncn4C)C[C@@H](C)C3)c2)c1=O
C26H27F3N6O
496.537000
QRNMXYQPWPALPI-XOWTYJCDSA-N P22681, Q13191 E3 ubiquitin-protein ligase CBL-B, E3 ubiquitin-protein ligase CBL
BindingDB
BindingDB:BDBM50642865
Local ready
Direct docking supported
E3L064964
BDB064964
PPAR|A/|A agonist 3
CC1(CC/C=N/Nc2nc3ccccc3s2)CCc2cc(OCc3ccc(F)cc3)ccc2O1
C27H26FN3O2S
475.589000
XZZBEVKWMQCPFH-MUFRIFMGSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50643353; PubChem:CID170453213
Local ready
Direct docking supported
E3L064965
BDB064965
BDBM50643354
CC1(CC/C=N/Nc2ncc(Cl)cc2C(F)(F)F)CCc2cc(OCc3ccc(F)cc3)ccc2O1
C26H24ClF4N3O2
521.942000
LYLKITZXILLNFB-RVDKCFQWSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50643354; PubChem:CID177382463
Local ready
Direct docking supported
E3L064966
BDB064966
BDBM50643355
C/C(=C\CCC1(C)CCc2cc(OCc3ccc(F)cc3)ccc2O1)CC/C=N/Nc1ncc(Cl)cc1C(F)(F)F
C31H32ClF4N3O2
590.061000
PIFZJFWIWKNCNB-ISOALGDESA-N Q07869 Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50643355; PubChem:CID170453216
Local ready
Direct docking supported
E3L064967
BDB064967
BDBM50643520
Nc1nc2cc(CC[C@H]3C[C@@H](Nc4ncnc5c4C(=O)CCN5)[C@H](O)[C@@H]3O)ccc2cc1Br
C23H25BrN6O3
513.396000
ZKGZTDISFHHJHP-DFXFOWLGSA-N O96028, Q9BZ95 Histone-lysine N-methyltransferase NSD2, Histone-lysine N-methyltransferase NSD3
BindingDB, PubChem
BindingDB:BDBM50643520; PubChem:CID177382574
Local ready
Direct docking supported
E3L064968
BDB064968
Prmt5-IN-33
Nc1nc2cc(CC[C@H]3C[C@@H](Nc4ncncc4C(=O)c4ccsc4)[C@H](O)[C@@H]3O)ccc2cc1Br
C25H24BrN5O3S
554.470000
ULTOCOVWRCTJDQ-RLTFZFDCSA-N O96028, Q9BZ95 Histone-lysine N-methyltransferase NSD3, Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM50643526; PubChem:CID170836126
Local ready
Direct docking supported
E3L064969
BDB064969
BDBM50643720
CC(=O)N1CCc2c(c(N3CCCc4cc(-c5cnn(C)c5)c(C(F)F)cc43)nn2C2CCN(C(=O)CN3Cc4cc5c(cc4C3)C(=O)N(C3CCC(=O)NC3=O)C5=O)CC2)C1
C44H46F2N10O6
848.912000
ADRVUGPWBAQVJT-UHFFFAOYSA-N Q09472, Q92793, Q96SW2 CREB-binding protein, Histone acetyltransferase p300, Protein cereblon
BindingDB
BindingDB:BDBM50643720
Local ready
Direct docking supported
E3L064970
BDB064970
BDBM50643721
CC(=O)N1CCc2c(c(N3CCCc4cc(-c5cnn(C)c5)c(C(F)F)cc43)nn2C2CCC(CCN3Cc4cc5c(cc4C3)C(=O)N(C3CCC(=O)NC3=O)C5=O)CC2)C1
C45H49F2N9O5
833.941000
UXNPHJKPDROTTJ-UHFFFAOYSA-N Q09472, Q92793, Q96SW2 Protein cereblon, Histone acetyltransferase p300, CREB-binding protein
BindingDB
BindingDB:BDBM50643721
Local ready
Direct docking supported
E3L064971
BDB064971
BDBM50643722
CC(=O)N1CCc2c(c(N3CCCc4cc(-c5cnn(C)c5)c(C(F)F)cc43)nn2[C@H]2CC[C@H](CN3Cc4cc5c(cc4C3)C(=O)N(C3CCC(=O)NC3=O)C5=O)CC2)C1
C44H47F2N9O5
819.914000
NORRDWRSNUOCBV-XCIZWWPASA-N Q09472, Q92793, Q96SW2 Protein cereblon, Histone acetyltransferase p300, CREB-binding protein
BindingDB
BindingDB:BDBM50643722
Local ready
Direct docking supported
E3L064972
BDB064972
BDBM50643723
CC(=O)N1CCc2c(c(N3CCCc4cc(-c5cnn(C)c5)c(C(F)F)cc43)nn2[C@H]2CC[C@@H](CN3Cc4cc5c(cc4C3)C(=O)N(C3CCC(=O)NC3=O)C5=O)CC2)C1
C44H47F2N9O5
819.914000
NORRDWRSNUOCBV-SHXPYSBDSA-N Q09472, Q92793, Q96SW2 CREB-binding protein, Protein cereblon, Histone acetyltransferase p300
BindingDB
BindingDB:BDBM50643723
Local ready
Direct docking supported
E3L064973
BDB064973
BDBM50643724
CC(=O)N1CCc2c(c(N3CCCc4cc(-c5cnn(C)c5)c(C(F)F)cc43)nn2C[C@H]2CC[C@H](CN3Cc4cc5c(cc4C3)C(=O)N(C3CCC(=O)NC3=O)C5=O)CC2)C1
C45H49F2N9O5
833.941000
JHZJBMRRFXYWAC-MEFIJNBOSA-N Q09472, Q92793, Q96SW2 CREB-binding protein, Protein cereblon, Histone acetyltransferase p300
BindingDB
BindingDB:BDBM50643724
Local ready
Direct docking supported
E3L064974
BDB064974
BDBM50643725
CC(=O)N1CCc2c(c(N3CCCc4cc(-c5cnn(C)c5)c(C(F)F)cc43)nn2CC2CCC(N3Cc4cc5c(cc4C3)C(=O)N(C3CCC(=O)NC3=O)C5=O)CC2)C1
C44H47F2N9O5
819.914000
NYSBJQXVHZZLDQ-UHFFFAOYSA-N Q09472, Q92793, Q96SW2 Protein cereblon, Histone acetyltransferase p300, CREB-binding protein
BindingDB
BindingDB:BDBM50643725
Local ready
Direct docking supported
E3L064975
BDB064975
BDBM50643726
CC(=O)N1CCc2c(c(N3CCCc4cc(-c5cnn(C)c5)c(C(F)F)cc43)nn2C2CCC(N3Cc4cc5c(cc4C3)C(=O)N(C3CCC(=O)NC3=O)C5=O)CC2)C1
C43H45F2N9O5
805.887000
XMMPMEMOIBXWRN-UHFFFAOYSA-N Q09472, Q92793, Q96SW2 CREB-binding protein, Histone acetyltransferase p300, Protein cereblon
BindingDB
BindingDB:BDBM50643726
Local ready
Direct docking supported
E3L064976
BDB064976
BDBM50644206
O=C(CNc1cccc2c1C(=O)N(C1CCC(=O)NC1=O)C2=O)NCCCCN1CCN(c2ccc(-c3cnc(NCc4ccco4)n4cnnc34)cc2)CC1
C39H41N11O6
759.828000
XWEAJJXKEDCFNU-UHFFFAOYSA-N O75530 Polycomb protein EED
BindingDB
BindingDB:BDBM50644206
Local ready
Direct docking supported
E3L064977
BDB064977
BDBM50644207
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](NC(=O)CCCCCCNC(=O)CCCCN2CCN(c3ccc(-c4cnc(NCc5ccco5)n5cnnc45)cc3)CC2)C(C)(C)C)cc1
C54H70N12O6S
1015.299000
USALWZWDTMQMFR-XXZNOAOZSA-N O75530 Polycomb protein EED
BindingDB
BindingDB:BDBM50644207
Local ready
Direct docking supported
E3L064978
BDB064978
BDBM50644529
CCCCN(C)CCN(CC)C(=O)CNCc1cc(C(=O)O)ccn1
C18H30N4O3
350.463000
ZVDVVBQKFXBYJN-UHFFFAOYSA-N P29375, P41229 Lysine-specific demethylase 5C, Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50644529; PubChem:CID177383169
Local ready
Direct docking supported
E3L064979
BDB064979
myristoyl-Asp-Gly-Tyr(PO3H2)-Met-Pro-OH
CCCCCCCCCCCCCC(=O)N[C@@H](CC(=O)O)C(=O)NCC(=O)N[C@@H](Cc1ccc(OP(=O)(O)O)cc1)C(=O)N[C@@H](CCSC)C(=O)N1CCC[C@H]1C(=O)O
C39H62N5O13PS
871.988000
MBHBSIOGJJYERC-YDPTYEFTSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM50644668; PubChem:CID177383256
Local ready
Direct docking supported
E3L064980
BDB064980
BDBM50644669
Cn1cnnc1[C@]1(c2cccc(-n3cc4c(C(F)(F)F)cc(CN5CCC6(CC6)C5)cn4c3=O)c2)C[C@H](C)C1
C29H31F3N6O
536.602000
RWFOTIRQBYEIRV-GCSLNTQSSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM50644669
Local ready
Direct docking supported