E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L065201
BDB065201
BDBM50648057
Cc1c(C(=O)NS(=O)(=O)N(C)C)cc(-c2ccc(Cl)c(Oc3cnccn3)c2)c2cc[nH]c12
C22H20ClN5O4S
485.953000
ZCEDSBRRQLSVCI-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50648057; PubChem:CID169501681
Local ready
Direct docking supported
E3L065202
BDB065202
BDBM50648226
CC(C)C[C@H](NC(=O)[C@H](CC(=O)O)NC(=O)[C@H](CCCNC(=N)N)NC(=O)CNC(=O)[C@@H]1CCCN1C(=O)[C@@H]1CCCN1C(=O)[C@H](C)NC(=O)CNC(=O)[C@@H]1CCCN1)C(=O)N[C@@H](C)C(=O)N[C@@H](CO)C(=O)N[C@H](C(=O)N1CCC[C@H]1C(=O)O)C(C)C
C54H88N16O17
1233.393000
UAYVWEHHNYALGR-MBYUFZISSA-N Q53G59 Kelch-like protein 12
BindingDB, PubChem
BindingDB:BDBM50648226; PubChem:CID177379136
Local ready
Direct docking supported
E3L065203
BDB065203
BDBM50648246
CC(=O)N[C@H](C(=O)N[C@@H](CO)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@]1(C)CCCCCC/C=C\CCC[C@@](C)(C(=O)NCOCCC(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](C)C(=O)N2CC(O)CC2C(=O)N[C@@H](Cc2ccc(O)cc2)C(=O)NC(CCC(C)C)C(=O)N2CCC[C@H]2C(N)=O)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](C)NC(=O)[C@H](Cc2cc3ccccc3[nH]2)NC(=O)[C@H](Cc2ccc(O)cc2)NC(=O)[C@H](CCC(=O)O)NC1=O)[C@@H](C)O
C114H166N20O27
2248.695000
GQZQBHCXCMFVMI-TWLIWWBMSA-N O15151, Q00987 E3 ubiquitin-protein ligase Mdm2, Protein Mdm4
BindingDB
BindingDB:BDBM50648246
Local ready
Direct docking supported
E3L065204
BDB065204
2-Methyl-2-[4-(Naphthalen-1-Yl)phenoxy]propanoic Acid
CC(C)(Oc1ccc(-c2cccc3ccccc23)cc1)C(=O)O
C20H18O3
306.361000
JTWKEZBNKHBDAW-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50648247; PubChem:CID327338
Local ready
Direct docking supported
E3L065205
BDB065205
(2R)-2-(4-naphthalen-1-ylphenoxy)propanoic acid
C[C@@H](Oc1ccc(-c2cccc3ccccc23)cc1)C(=O)O
C19H16O3
292.334000
FCMNFGHUNVXXEJ-CYBMUJFWSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50648248; PubChem:CID177379150
Local ready
Direct docking supported
E3L065206
BDB065206
(2S)-2-(4-naphthalen-1-ylphenoxy)propanoic acid
C[C@H](Oc1ccc(-c2cccc3ccccc23)cc1)C(=O)O
C19H16O3
292.334000
FCMNFGHUNVXXEJ-ZDUSSCGKSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50648249; PubChem:CID177379151
Local ready
Direct docking supported
E3L065207
BDB065207
2-Methyl-2-(4-naphthalen-1-ylphenoxy)butanoic acid
CCC(C)(Oc1ccc(-c2cccc3ccccc23)cc1)C(=O)O
C21H20O3
320.388000
XGKIRSQMAWQLFY-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50648250; PubChem:CID177379152
Local ready
Direct docking supported
E3L065208
BDB065208
(2R)-2-methyl-2-(4-naphthalen-1-ylphenoxy)butanoic acid
CC[C@@](C)(Oc1ccc(-c2cccc3ccccc23)cc1)C(=O)O
C21H20O3
320.388000
XGKIRSQMAWQLFY-OAQYLSRUSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50648251; PubChem:CID177379153
Local ready
Direct docking supported
E3L065209
BDB065209
(2S)-2-methyl-2-(4-naphthalen-1-ylphenoxy)butanoic acid
CC[C@](C)(Oc1ccc(-c2cccc3ccccc23)cc1)C(=O)O
C21H20O3
320.388000
XGKIRSQMAWQLFY-NRFANRHFSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50648252; PubChem:CID177379154
Local ready
Direct docking supported
E3L065210
BDB065210
2-(4-Naphthalen-1-ylphenoxy)butanoic acid
CCC(Oc1ccc(-c2cccc3ccccc23)cc1)C(=O)O
C20H18O3
306.361000
ZIKRVSNAQYDXRL-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50648253; PubChem:CID177379155
Local ready
Direct docking supported
E3L065211
BDB065211
(2R)-2-(4-naphthalen-1-ylphenoxy)butanoic acid
CC[C@@H](Oc1ccc(-c2cccc3ccccc23)cc1)C(=O)O
C20H18O3
306.361000
ZIKRVSNAQYDXRL-LJQANCHMSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50648254; PubChem:CID177379156
Local ready
Direct docking supported
E3L065212
BDB065212
(2S)-2-(4-naphthalen-1-ylphenoxy)butanoic acid
CC[C@H](Oc1ccc(-c2cccc3ccccc23)cc1)C(=O)O
C20H18O3
306.361000
ZIKRVSNAQYDXRL-IBGZPJMESA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50648255; PubChem:CID177379157
Local ready
Direct docking supported
E3L065213
BDB065213
3-Methyl-2-(4-naphthalen-1-ylphenoxy)butanoic acid
CC(C)C(Oc1ccc(-c2cccc3ccccc23)cc1)C(=O)O
C21H20O3
320.388000
VYALNXIWBYSZNJ-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50648256; PubChem:CID177379158
Local ready
Direct docking supported
E3L065214
BDB065214
(2S)-3-methyl-2-(4-naphthalen-1-ylphenoxy)butanoic acid
CC(C)[C@H](Oc1ccc(-c2cccc3ccccc23)cc1)C(=O)O
C21H20O3
320.388000
VYALNXIWBYSZNJ-FQEVSTJZSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50648257; PubChem:CID177379159
Local ready
Direct docking supported
E3L065215
BDB065215
2-(4-Naphthalen-1-ylphenoxy)-2-phenylpropanoic acid
CC(Oc1ccc(-c2cccc3ccccc23)cc1)(C(=O)O)c1ccccc1
C25H20O3
368.432000
RACIWMNCWUXKGH-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50648258; PubChem:CID177379160
Local ready
Direct docking supported
E3L065216
BDB065216
BDBM50648259
O=C(O)[C@H](Cc1ccccc1)Oc1ccc(-c2cccc3ccccc23)cc1
C25H20O3
368.432000
UDWUKDKWHIAYOW-DEOSSOPVSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50648259; PubChem:CID172053276
Local ready
Direct docking supported
E3L065217
BDB065217
BDBM50648615
COc1ccc(NC(=O)COc2cc(O)c3c(=O)cc(-c4ccccc4)oc3c2)cc1OC
C25H21NO7
447.443000
KMEHSINIYSBYFT-UHFFFAOYSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50648615; PubChem:CID177379412
Local ready
Direct docking supported
E3L065218
BDB065218
BDBM50648616
O=C(COc1cc(O)c2c(=O)cc(-c3ccccc3)oc2c1)NCc1ccc(C(F)(F)F)cc1
C25H18F3NO5
469.415000
LJLGNPSPXNZOCN-UHFFFAOYSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50648616; PubChem:CID172419458
Local ready
Direct docking supported
E3L065219
BDB065219
BDBM50648946
Nc1ncnc2c1ncn2[C@@H]1O[C@H](CSCCNCc2cccc(Br)c2)[C@@H](O)[C@H]1O
C19H23BrN6O3S
495.403000
JGFTVBMOETWOQF-NVQRDWNXSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM50648946; PubChem:CID172908648
Local ready
Direct docking supported
E3L065220
BDB065220
BDBM50649044
CNC(=O)c1ccc(N2CCN(Cc3ccc4c(c3)[nH]c(=O)n3cccc43)CC2)c(C)n1
C24H26N6O2
430.512000
GCYAKZZBZIDGIO-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50649044; PubChem:CID171572901
Local ready
Direct docking supported