E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L065684
LIG000254
9i
COc1ccc(C(=O)/C=C/C(=O)N2CCN(c3ccc(-n4nnc5c(=O)[nH]c6ccc(-c7ccc(OC)nc7)cc6c54)cc3C(F)(F)F)CC2)cc1
C37H30F3N7O5
709.685000
DBIQHRMAWALVBI-WYMLVPIESA-N - -
MolGlueDB
MolGlueDB:MGDB656
Local ready
Direct docking supported
E3L065685
LIG000255
QXG-0632
O=C1CCC(N2Cc3cc(-c4cnc5ccccc5c4)ccc3C2=O)C(=O)N1
C22H17N3O3
371.396000
DBTUFNLLQDVGDB-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1168
Local ready
Direct docking supported
E3L065687
LIG000257
cmp31
NC(=O)c1ccc(N2CCN(Cc3ccc(COc4cccc5c4CN(C4CCC(=O)NC4=O)C5=O)cc3)CC2)nc1
C31H32N6O5
568.634000
DBZRRVVDMHIECD-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB775
Local ready
Direct docking supported
E3L065688
LIG000258
17a
CN1C(=O)CCC(CSc2ccccc2)C1=O
C13H15NO2S
249.335000
DCALUXGQDNMVKL-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB533
Local ready
Direct docking supported
E3L065689
LIG000259
VHL-SF2
Cc1cc([C@H](C(=O)N2C[C@H](S(=O)(=O)F)C[C@@H]2C(=O)N[C@@H](CC(=O)OC(C)(C)C)c2ccc(-c3scnc3C)cc2)C(C)C)on1
C31H39FN4O7S2
662.806000
DCGHVFWQHHOLKF-JPYYHWIRSA-N P40337 -
e3_ligand
e3_ligand:127
Local ready
Direct docking supported
E3L065690
LIG000260
GBD-8
Nc1ncnc2c1c(-c1ccc(Oc3ccccc3)cc1)nn2[C@H]1CCCN(C(=O)CCCCCCCCNc2ccc3c(c2)C(=O)N(C2CCC(=O)NC2=O)C3=O)C1
C44H47N9O6
797.917000
DCJYQURCBHSFEP-KIYCQYGCSA-N - -
MolGlueDB
MolGlueDB:MGDB837
Local ready
Direct docking supported
E3L065691
LIG000261
GBD-9
Nc1ncnc2c1c(-c1ccc(Oc3ccccc3)cc1)nn2C1CCCN(C(=O)CCCCCCCCNc2ccc3c(c2)C(=O)N(C2CCC(=O)NC2=O)C3=O)C1
C44H47N9O6
797.917000
DCJYQURCBHSFEP-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB843
Local ready
Direct docking supported
E3L065692
LIG000262
DS59
Cc1nn(C)c(CNc2nc(NCc3ccc(-c4ccccn4)cc3)c3ncn(C(C)C)c3n2)c1S(N)(=O)=O
C26H30N10O2S
546.661000
DCNMIIRVWOSZDG-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1603
Local ready
Direct docking supported
E3L065693
LIG000263
Lib-C-6J
CN1C(=O)CCC(N2Cc3cc(-c4ccc(OCC(=O)N/N=C/c5c(C(F)(F)F)ccc(Cl)c5Cl)cc4)ccc3C2=O)C1=O
C30H23Cl2F3N4O5
647.437000
DCORTUZKSPUXBP-FIFHTESVSA-N - -
MolGlueDB
MolGlueDB:MGDB539
Local ready
Direct docking supported
E3L065694
LIG000264
40
O=C(NCc1ccc(-c2ccccn2)cc1)c1n[nH]cc1NC(=O)c1c(Cl)cccc1Cl
C23H17Cl2N5O2
466.328000
DCPUWHPUJFAXLO-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB881
Local ready
Direct docking supported
E3L065695
LIG000265
dALK-3
COc1ccc(C(=O)/C=C/C(=O)N2CCN(C3CCN(c4ccc(Nc5ncc(Cl)c(Nc6ccccc6P(C)(C)=O)n5)c(OC)c4)CC3)CC2)cc1
C39H45ClN7O5P
758.260000
DCTDXSOVOPNNQC-FOCLMDBBSA-N - -
MolGlueDB
MolGlueDB:MGDB1430
Local ready
Direct docking supported
E3L065696
LIG000266
DS64
CC[C@H](CO)Nc1nc(NCc2nc3ccc(F)c(F)c3[nH]2)c2ncn(C(C)C)c2n1
C20H24F2N8O
430.463000
DCTODZNTFHJKGP-LLVKDONJSA-N - -
MolGlueDB
MolGlueDB:MGDB1617
Local ready
Direct docking supported
E3L065697
LIG000267
9k
Cc1c(Cl)cc(NC(=O)CCc2ccc3c(c2)C(=O)N(C2CCC(=O)NC2=O)C3)cc1N1CCOCC1
C27H29ClN4O5
525.005000
DCWWHXBDVHWFFQ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB297
Local ready
Direct docking supported
E3L065698
LIG000268
6
CC(C)(C)[C@H](NC(=O)c1cnn2c1OCCC2)C(=O)N1C[C@H](O)C[C@H]1C(=O)NCc1ccc(-c2ccccc2)cc1
C31H37N5O5
559.667000
DEAOEVVJHVQDDF-DMTNHVFBSA-N - -
MolGlueDB
MolGlueDB:MGDB1451
Local ready
Direct docking supported
E3L065699
LIG000269
ZXH-1-155
O=C1CCC(N2Cc3c(NC4=NC(Nc5ccc6c(c5)OCCO6)NC=C4)cccc3C2=O)C(=O)N1
C25H24N6O5
488.504000
DEBSFTNSWYYRPE-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1154
Local ready
Direct docking supported
E3L065700
LIG000270
24
O=C1CCC(N2Cc3cc(NCc4ccc5ccc6cccc7ccc4c5c67)ccc3C2=O)C(=O)N1
C30H23N3O3
473.532000
DEHJLQBKFLXFQR-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1216
Local ready
Direct docking supported
E3L065701
LIG000271
Selinexor
O=C(/C=C\n1cnc(-c2cc(C(F)(F)F)cc(C(F)(F)F)c2)n1)NNc1cnccn1
C17H11F6N7O
443.311000
DEVSOMFAQLZNKR-RJRFIUFISA-N - -
MolGlueDB
MolGlueDB:MGDB852
Local ready
Direct docking supported
E3L065702
LIG000272
EN884
C=CC(=O)N1CCC(Cc2ccccn2)CC1
C14H18N2O
230.311000
DFQDQRLZIBXXOA-UHFFFAOYSA-N P63208 -
e3_ligand
e3_ligand:108
Local ready
Direct docking supported
E3L065703
LIG000273
LIG000273
O=C1CCC(N2C(=O)c3cc4c(cc3C2=O)CNC4)C(=O)N1
C15H13N3O4
299.286000
DFRCTMCXNOBCLU-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, e3_ligand
BindingDB:BDBM50618118; e3_ligand:75
Local ready
Direct docking supported
E3L065704
LIG000274
21
O=C1CCC(N2Cc3cc(NC4=NN=C5C=CC=CC54)ccc3C2=O)C(=O)N1
C20H17N5O3
375.388000
DFWFWUACKACIKL-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1080
Local ready
Direct docking supported