E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L065726
LIG000296
ZXH-2-050
O=C1CCC(N2Cc3c(Nc4ccnc(Nc5ccc6c(c5)CCN6)n4)cccc3C2=O)C(=O)N1
C25H23N7O3
469.505000
DNRXXLVPEWRIEU-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1145
Local ready
Direct docking supported
E3L065727
LIG000297
40
O=C1CCN(c2ccc(OCc3ccc(CN4CCOCC4)cc3)cc2)C(=O)N1
C22H25N3O4
395.459000
DOENTLHKBSYPJG-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB764
Local ready
Direct docking supported
E3L065728
LIG000298
3
Cc1ccc(NC(=O)NCc2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)cc1Cl
C22H21ClN4O4
440.887000
DOEVCIHTTTYVCC-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB348
Local ready
Direct docking supported
E3L065738
LIG000308
LL-K12-12
CCn1cnc2c(NCc3nc4cc(Cl)c(Cl)cc4[nH]3)nc(N3CCN(C(=O)c4ccccn4)CC3)nc21
C25H24Cl2N10O
551.442000
DOKAPKZMYDLVOE-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB470
Local ready
Direct docking supported
E3L065739
LIG000309
LIG000309
C[C@@H](O)[C@H](N)C(=O)N[C@H]1CC(=O)NC1=O
C8H13N3O4
215.209000
DOTRNXZZJCEVDD-IWGUZYHVSA-N Q96SW2 -
e3_ligand
e3_ligand:122
Local ready
Direct docking supported
E3L065740
LIG000310
22q
O=C1CCC(n2nnc3ccc(CNC(=O)Nc4cccc(-c5ccccc5)c4)cc3c2=O)C(=O)N1
C26H22N6O4
482.500000
DOVCJYPISITJGR-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1197
Local ready
Direct docking supported
E3L065741
LIG000311
CCW 16
COc1ccc(Oc2ccc(N(Cc3ccccc3)C(=O)CCl)cc2)cc1
C22H20ClNO3
381.859000
DPADEQNOMBTITM-UHFFFAOYSA-N P78317 E3 ubiquitin-protein ligase RNF4
BindingDB, e3_ligand
BindingDB:BDBM50404381; e3_ligand:61
Local ready
Direct docking supported
E3L065742
LIG000312
46
COc1cnc2cc(C(=O)Nc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)ccc2c1
C24H20N4O5
444.447000
DPCNQUQEWFWFHL-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB745
Local ready
Direct docking supported
E3L065743
LIG000313
DS18
CC(C)n1cnc2c(NCc3nc4cc(Cl)c(Cl)cc4[nH]3)nc(N3CCOCC3)nc21
C20H22Cl2N8O
461.357000
DPCUNIIUTMKIKJ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB161
Local ready
Direct docking supported
E3L065744
LIG000314
GSK2250665A
CCc1ccc2nc(Nc3cc(Cc4ccccc4)nc(N[C@H]4CC[C@H](O)CC4)n3)sc2c1
C26H29N5OS
459.619000
DPRNXTSMYVCYLJ-XUTJKUGGSA-N - -
MolGlueDB
MolGlueDB:MGDB1625
Local ready
Direct docking supported
E3L065745
LIG000315
JQ1-FcQ
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCCCCCCC(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@H]1CCC(=O)NC1=O)c1nnc(C)n1-2
C42H49ClN8O5S
813.425000
DPTJZVQTTIPIPR-ZDCRTTOTSA-N - -
MolGlueDB
MolGlueDB:MGDB1296
Local ready
Direct docking supported
E3L065746
LIG000316
22g
COc1ccc(NC(=O)NCc2ccc3nnn(C4CCC(=O)NC4=O)c(=O)c3c2)cc1Cl
C21H19ClN6O5
470.873000
DQBZLCLGWULMMR-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB617
Local ready
Direct docking supported
E3L065747
LIG000317
cmpd 12
COc1cccc(S(=O)(=O)Nc2nccc(Nc3cccc4c3C(=O)N(C3CCC(=O)NC3=O)C4=O)n2)c1
C24H20N6O7S
536.526000
DQMAPMLXEPOVPI-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB713
Local ready
Direct docking supported
E3L065748
LIG000318
14s
Nc1ccc(SCC2CCC(=O)NC2=O)cc1
C12H14N2O2S
250.323000
DRRNCOUWDHEAEU-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50625137; MolGlueDB:MGDB807
Local ready
Direct docking supported
E3L065749
LIG000319
Compound 8
Nc1c(-c2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)nc2ccccn12
C20H17N5O3
375.388000
DSESRVIUYQBZFJ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB778
Local ready
Direct docking supported
E3L065750
LIG000320
Lib-D-12L
Cc1nc2ccccn2c1/C=N/NC(=O)COc1ccccc1-c1cccc2c1CN(C1CCC(=O)N(C)C1=O)C2=O
C31H28N6O5
564.602000
DSOWKLVGSISKSC-KPGMTVGESA-N - -
MolGlueDB
MolGlueDB:MGDB232
Local ready
Direct docking supported
E3L065751
LIG000321
26
O=C1CCC(N2C(=O)c3cccc(NCC4CC5(CCN(C[C@H]6CC[C@H](n7cc8cc(NC(=O)c9cccc(C(F)(F)F)n9)c(C(F)F)cc8n7)CC6)CC5)C4)c3C2=O)C(=O)N1
C44H45F5N8O5
860.885000
DSZVFSMDHQLFKQ-ZBTZYFEDSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50639850; MolGlueDB:MGDB982
Local ready
Direct docking supported
E3L065752
LIG000322
HQ011
Cc1cnc(NC(=O)Cc2csc(N)n2)s1
C9H10N4OS2
254.340000
DTBCZPRZASRIPY-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB393
Local ready
Direct docking supported
E3L065753
LIG000323
51
O=C1CCC(N2Cc3cc(NC(=O)c4cccc(Oc5ccccc5)c4)ccc3C2=O)C(=O)N1
C26H21N3O5
455.470000
DTGOZYNEQILPSF-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1192
Local ready
Direct docking supported
E3L065754
LIG000324
ZXH-1-138
COc1ccccc1Nc1nccc(NCC(=O)Nc2cccc3c2CN(C2CCC(=O)NC2=O)C3=O)n1
C26H25N7O5
515.530000
DTVIIAPUEAVPGV-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM585787; MolGlueDB:MGDB717
Local ready
Direct docking supported