E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L066167
LIG000737
cmp21
O=C1CCC(N2Cc3c(OCc4ccc(CN5CCN(c6ccccc6)CC5)cc4)cccc3C2=O)C(=O)N1
C31H32N4O4
524.621000
JPKXBLGZLCXVCV-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1113
Local ready
Direct docking supported
E3L066168
LIG000738
20a
O=C1CCC(CS(=O)(=O)c2ccccc2)C(=O)N1
C12H13NO4S
267.306000
JPOLQZHTTNLNIA-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50625141; MolGlueDB:MGDB932
Local ready
Direct docking supported
E3L066169
LIG000739
C6
CCOC(=O)C1CCCN(C(=O)c2nn(-c3ccc(C)c(C)c3)c(=O)n(Cc3cccc(OC)c3)c2=O)C1
C28H32N4O6
520.586000
JPTXNBFEVPYCHH-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1436
Local ready
Direct docking supported
E3L066170
LIG000740
48
CC(C)(C)OC(=O)N1CC2(C1)CN(c1cc3c(cc1F)C(=O)N(C1CCC(=O)NC1=O)C3=O)C2
C23H25FN4O6
472.473000
JPZUMDBHKYFTAY-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB104
Local ready
Direct docking supported
E3L066171
LIG000741
4
COc1ccc(N)c2c1C(=O)N(C1CCC(=O)NC1=O)C2=O
C14H13N3O5
303.274000
JQKAGYPIPZUGHW-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1280
Local ready
Direct docking supported
E3L066172
LIG000742
21
Nc1cccc2c1cnn2C1CCC(=O)NC1=O
C12H12N4O2
244.254000
JQUNMWPNAPLWEB-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB827
Local ready
Direct docking supported
E3L066173
LIG000743
TR-893
COc1cc2nc(N3CC=C(c4ccc(C#N)cc4)CC3)[nH]c(=O)c2cc1OC
C22H20N4O3
388.427000
JSEHWXSZCKKXFO-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB623
Local ready
Direct docking supported
E3L066174
LIG000744
cmp16
O=C1CCC(N2Cc3c(OCc4ccc(CN5CCN(c6ccccc6F)CC5)cc4)cccc3C2=O)C(=O)N1
C31H31FN4O4
542.611000
JSLQVZMJYVNDOU-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1108
Local ready
Direct docking supported
E3L066175
LIG000745
27
COc1cc2nn([C@H]3CC[C@H](CN4CC5(CC(CCNc6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)C5)C4)CC3)cc2cc1NC(=O)c1cccc(C(F)(F)F)n1
C43H45F3N8O6
826.877000
JSUPGKUFXBNOPG-SCXZZJSSSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50639851; MolGlueDB:MGDB743
Local ready
Direct docking supported
E3L066176
LIG000746
(R,S)-3d
CC(C)(C)NC(=O)[C@H]1c2ccccc2C(=O)N1[C@H]1CCC(=O)NC1=O
C18H21N3O4
343.383000
JTEPTTKRAXKZIM-GXTWGEPZSA-N - -
MolGlueDB
MolGlueDB:MGDB97
Local ready
Direct docking supported
E3L066177
LIG000747
(S,S)-3d
CC(C)(C)NC(=O)[C@@H]1c2ccccc2C(=O)N1[C@H]1CCC(=O)NC1=O
C18H21N3O4
343.383000
JTEPTTKRAXKZIM-JSGCOSHPSA-N - -
MolGlueDB
MolGlueDB:MGDB94
Local ready
Direct docking supported
E3L066178
LIG000748
22e
O=C1CCC(n2nnc3ccc(CNC(=O)Nc4ccccc4)cc3c2=O)C(=O)N1
C20H18N6O4
406.402000
JTHFJRKOXZSRRF-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB594
Local ready
Direct docking supported
E3L066179
LIG000749
42
Cc1ccc(NC(=O)NCc2ccccc2C(=O)NC2CCC(=O)NC2=O)cc1Cl
C21H21ClN4O4
428.876000
JTJHLVXCCRSPRO-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB354
Local ready
Direct docking supported
E3L066180
LIG000750
cmp69
O=C1CCC(N2Cc3c(OCc4ccc(C(=O)N5CCN(c6ccc(F)cc6)CC5)cc4)cccc3C2=O)C(=O)N1
C31H29FN4O5
556.594000
JTKYSCGXJUZDKJ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1102
Local ready
Direct docking supported
E3L066181
LIG000751
WX4
CC[C@H](CO)Nc1nc(NCc2cnc(-c3ccccn3)cc2C2OCCO2)c2ncn(C(C)C)c2n1
C26H32N8O3
504.595000
JTQIVHHWKGMCSQ-GOSISDBHSA-N - -
MolGlueDB
MolGlueDB:MGDB1574
Local ready
Direct docking supported
E3L066182
LIG000752
6O
Cn1c(=O)n(C2CCC(=O)NC2=O)c2ccc(Br)cc21
C13H12BrN3O3
338.161000
JTRNEHBIODAOTJ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB541
Local ready
Direct docking supported
E3L066183
LIG000753
ZXH-1-127
O=C1CCC(N2Cc3c(NC(=O)CNc4ccnc(-c5cc6ccccc6o5)n4)cccc3C2=O)C(=O)N1
C27H22N6O5
510.510000
JUCGWWSMSDVSHT-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM585785; MolGlueDB:MGDB1131
Local ready
Direct docking supported
E3L066184
LIG000754
LIG000754
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CCC[C@H]1C(=O)N[C@@H]1CCCc2ccccc21)C(C)(C)C
C25H38N4O3
442.604000
JUJIMRZGUBTJRV-NASSWSRMSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, e3_ligand
BindingDB:BDBM13166; e3_ligand:70
Related BindingDB:BDBM13180; Related BindingDB:BDBM13167
Local ready
Direct docking supported
E3L066185
LIG000755
13
COc1ccc(COc2cscc2-c2cn(C3CCC(=O)NC3=O)nn2)cc1
C19H18N4O4S
398.444000
JVECXQTZSKVUAT-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1306
Local ready
Direct docking supported
E3L066186
LIG000756
27
Nc1ccc(C2CCC(=O)NC2=O)cc1
C11H12N2O2
204.229000
JVJPHIBFEJRVNE-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB802
Local ready
Direct docking supported