E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L066126
LIG000696
(R,S)-2a
CC(=O)N([C@H]1CCC(=O)NC1=O)[C@@H](C(=O)NC(C)(C)C)c1ccc(C)cc1
C20H27N3O4
373.453000
JDWPBOIXGWSFER-DOTOQJQBSA-N - -
MolGlueDB
MolGlueDB:MGDB52
Local ready
Direct docking supported
E3L066127
LIG000697
(S,S)-2a
CC(=O)N([C@H](C(=O)NC(C)(C)C)c1ccc(C)cc1)[C@H]1CCC(=O)NC1=O
C20H27N3O4
373.453000
JDWPBOIXGWSFER-RDJZCZTQSA-N - -
MolGlueDB
MolGlueDB:MGDB50
Local ready
Direct docking supported
E3L066128
LIG000698
JP-2-244
CNc1nc(Nc2ccc(C(=O)N3CCN(C(=O)/C=C/C(=O)c4ccc(OC)cc4)CC3)cc2OC)ncc1Cl
C28H29ClN6O5
565.030000
JEAMPRFLKUGMIJ-ZHACJKMWSA-N - -
MolGlueDB
MolGlueDB:MGDB598
Local ready
Direct docking supported
E3L066129
LIG000699
8
CC(O)(C#Cc1cccc2c1CN(C1CCC(=O)NC1=O)C2=O)C1CCNCC1
C22H25N3O4
395.459000
JEIRJKDDARIGQA-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1375
Local ready
Direct docking supported
E3L066130
LIG000700
TMX4128
Cc1sc2c(c1C)C(c1ccc(C#CC=O)cc1)=N[C@@H](CC(=O)OC(C)(C)C)c1nnc(C)n1-2
C26H26N4O3S
474.586000
JEJGRWMOILENAT-FQEVSTJZSA-N - -
MolGlueDB
MolGlueDB:MGDB267
Local ready
Direct docking supported
E3L066131
LIG000701
(R,S)-2b
CC(=O)N([C@H]1CCC(=O)NC1=O)[C@@H](C(=O)NC1CCCCC1)c1ccc(C)cc1
C22H29N3O4
399.491000
JEPJFAOKUIJZTO-AZUAARDMSA-N - -
MolGlueDB
MolGlueDB:MGDB53
Local ready
Direct docking supported
E3L066132
LIG000702
(S,S)-2b
CC(=O)N([C@H](C(=O)NC1CCCCC1)c1ccc(C)cc1)[C@H]1CCC(=O)NC1=O
C22H29N3O4
399.491000
JEPJFAOKUIJZTO-ICSRJNTNSA-N - -
MolGlueDB
MolGlueDB:MGDB51
Local ready
Direct docking supported
E3L066133
LIG000703
34
COc1cc2c(OC)cccc2cc1CNc1ccc2c(c1)CN(C1CCC(=O)NC1=O)C2=O
C26H25N3O5
459.502000
JEZIYLSEQXNWRA-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB738
Local ready
Direct docking supported
E3L066134
LIG000704
LC-04-075
O=C1CCC(N2Cc3cc(-c4ccn5nccc5n4)ccc3C2=O)C(=O)N1
C19H15N5O3
361.361000
JFGCAFRJJYPKRT-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1173
Local ready
Direct docking supported
E3L066135
LIG000705
DS55
Cn1cc(-n2cnc3c(NCc4nc5ccccc5[nH]4)nc(N4CCOCC4)nc32)cn1
C21H22N10O
430.476000
JFGZKHLBVCENSW-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1609
Local ready
Direct docking supported
E3L066136
LIG000706
5
O=C1CCC(N2Cc3cc(NCc4cccc(OCc5ccccc5)c4)ccc3C2=O)C(=O)N1
C27H25N3O4
455.514000
JGBMVFWFWUPLDL-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1215
Local ready
Direct docking supported
E3L066137
LIG000707
Compound 3
CCC(C)(CCNS(=O)(=O)Nc1ccc2c(c1)CN(C1CCC(=O)NC1=O)C2=O)c1ccccc1OC
C26H32N4O6S
528.631000
JGOOHVLCQOYYOY-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB430
Local ready
Direct docking supported
E3L066138
LIG000708
dBET-6
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCCCCCCNC(=O)COc1cccc3c1C(=O)N(C1CCC(=O)NC1=O)C3=O)c1nnc(C)n1-2
C42H45ClN8O7S
841.391000
JGQPZPLJOBHHBK-UFXYQILXSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, MolGlueDB
BindingDB:BDBM511598; MolGlueDB:MGDB262
Related BindingDB:BDBM511597
Local ready
Direct docking supported
E3L066139
LIG000709
36
[2H]C([2H])([2H])Oc1ccc2cc(C(=O)Nc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)ccc2c1
C25H21N3O5
446.477305
JGWFFKIYBDZDFI-FIBGUPNXSA-N - -
MolGlueDB
MolGlueDB:MGDB1
Local ready
Direct docking supported
E3L066140
LIG000710
DEG-35
COc1ccc2cc(C(=O)Nc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)ccc2c1
C25H21N3O5
443.459000
JGWFFKIYBDZDFI-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB698
Local ready
Direct docking supported
E3L066142
LIG000712
14v
CC(=O)Nc1ccc(SCC2CCC(=O)NC2=O)cc1
C14H16N2O3S
292.360000
JHMBNUXUWSOKCO-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50625140; MolGlueDB:MGDB72
Local ready
Direct docking supported
E3L066143
LIG000713
LIG000713
Cc1ncsc1-c1ccc([C@H](C)NC(=O)[C@@H]2C[C@@H](O)CN2C(=O)CC(C)(C)C)cc1
C23H31N3O3S
429.586000
JHNIFIROGIMEAK-KYNGSXCRSA-N P40337 -
e3_ligand
e3_ligand:146
Local ready
Direct docking supported
E3L066144
LIG000714
MGD-28
CN1Cc2c(NCc3ccc(CN4CCN(c5ccc(C#N)c(F)c5)CC4)cc3)cccc2C(=O)N1C1CCC(=O)NC1=O
C33H34FN7O3
595.679000
JICHBFQDRLGJTM-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB563
Local ready
Direct docking supported
E3L066145
LIG000715
LIG000715
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CCC[C@H]1c1nc(C(=O)c2ccc(F)cc2)cs1)C1CCN(C)CC1
C26H34FN5O3S
515.655000
JIOIGDQISXGQSO-SSKFGXFMSA-N - -
e3_ligand
e3_ligand:45
Local ready
Direct docking supported
E3L066146
LIG000716
24a
CC1CCCN(c2ncc(Cl)c(Nc3ccc4c(c3)n(CCC(C)(C)O)c(=O)n4C)n2)C1
C23H31ClN6O2
458.994000
JJRNMFKHVQJGBN-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, MolGlueDB
BindingDB:BDBM50511623; MolGlueDB:MGDB425
Local ready
Direct docking supported