E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L066103
LIG000673
4h
COC(=O)c1nc(NC(=O)Cn2cnc(C)c(C)c2=O)sc1Cc1ccccc1
C20H20N4O4S
412.471000
IYBAILYMHNFNGK-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1478
Local ready
Direct docking supported
E3L066104
LIG000674
33
O=C1CCN(c2ccccc2)C(=O)N1
C10H10N2O2
190.202000
IYBINJWRHRKLTJ-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, e3_ligand, MolGlueDB
BindingDB:BDBM581732; e3_ligand:77; MolGlueDB:MGDB762
Local ready
Direct docking supported
E3L066106
LIG000676
ZXH-1-163
CCN(Cc1ccccc1)C1N=C(Nc2cccc3c2CN(C2CCC(=O)NC2=O)C3=O)C=CN1
C26H28N6O3
472.549000
IYMJRNITWLMQNI-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB458
Local ready
Direct docking supported
E3L066107
LIG000677
DS69
CC[C@H](CO)Nc1nc(NCCCc2cccc(C)n2)c2ncn(C(C)C)c2n1
C21H31N7O
397.527000
IYNJPMYEAQNCBL-MRXNPFEDSA-N - -
MolGlueDB
MolGlueDB:MGDB1582
Local ready
Direct docking supported
E3L066108
LIG000678
cmp12b
O=C(O)CCC(=O)NCc1ccc(COC(=O)NC2CCC(=O)NC2=O)cc1
C18H21N3O7
391.380000
IYOYSSFBNZPDGU-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB888
Local ready
Direct docking supported
E3L066109
LIG000679
LIG000679
CN1C(=O)CCC(N2C(=O)c3ccccc3C2=O)C1=O
C14H12N2O4
272.260000
IYYPLFUVXTVBLD-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, e3_ligand
BindingDB:BDBM733974; e3_ligand:155
Local ready
Direct docking supported
E3L066110
LIG000680
8c
COc1ccc(Br)cc1S(=O)(=O)Nc1cc2c(C)noc2cc1OCC(=O)NCCCCNc1ccc2c(c1)C(=O)N(C1CCC(=O)NC1=O)C2=O
C34H33BrN6O10S
797.641000
IZACCWKGFNCWEU-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB645
Local ready
Direct docking supported
E3L066111
LIG000681
20
Nc1n[nH]c2c(CN3CCCC4(COC4)C3)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc12
C27H29N7O4
515.574000
IZSDNUFXBLBMLW-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1511
Local ready
Direct docking supported
E3L066112
LIG000682
DS31
CC[C@H](CO)Nc1nc(NCCc2ccccc2)c2ncn(C(C)C)c2n1
C20H28N6O
368.485000
IZTUOVOTDRDXOG-MRXNPFEDSA-N - -
MolGlueDB
MolGlueDB:MGDB1565
Local ready
Direct docking supported
E3L066113
LIG000683
AKOS018335184
O=C1CCN(c2ccccc2Cl)C(=O)N1
C10H9ClN2O2
224.647000
JADCAPMFEZPUSD-UHFFFAOYSA-N Q96SW2 -
e3_ligand
e3_ligand:78
Local ready
Direct docking supported
E3L066114
LIG000684
6
CC(=O)N[C@H](C(=O)N1C[C@H](O)C[C@H]1C(=O)N[C@@H](C)c1ccc(-c2scnc2C)cc1)C(C)(C)C
C25H34N4O4S
486.638000
JAHUHEDUDMTTTF-COWZOJLOSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, e3_ligand, MolGlueDB
BindingDB:BDBM50615684; e3_ligand:15; MolGlueDB:MGDB55
Related BindingDB:BDBM50637329
Local ready
Direct docking supported
E3L066115
LIG000685
ML 1-55
COC(=O)Oc1cc(NC(=O)C[C@@H]2N=C(c3ccc(Cl)cc3)c3c(sc(C)c3C)-n3c(C)nnc32)c(C(C)(C)C)cc1C(C)(C)C
C35H40ClN5O4S
662.256000
JBEJPXQZHLEYQJ-SANMLTNESA-N - -
MolGlueDB
MolGlueDB:MGDB611
Local ready
Direct docking supported
E3L066116
LIG000686
9
Nc1ccc(C(=O)NC2CCC(=O)NC2=O)cc1
C12H13N3O3
247.254000
JBOKBLSWHXNCMS-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50630592; MolGlueDB:MGDB801
Local ready
Direct docking supported
E3L066119
LIG000689
R1
Nc1ccc(C(=O)NC2CCC(=O)NC2=O)cc1
C12H13N3O3
247.254000
JBOKBLSWHXNCMS-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1382
Local ready
Direct docking supported
E3L066120
LIG000690
cmp23
CC(C)C1CCN(Cc2ccc(COc3cccc4c3CN(C3CCC(=O)NC3=O)C4=O)cc2)CC1
C29H35N3O4
489.616000
JBPNVVIHWFBAQI-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB156
Local ready
Direct docking supported
E3L066121
LIG000691
C7
N#CCc1cccc2c1C(=O)N(C1CCC(=O)NC1=O)C2=O
C15H11N3O4
297.270000
JCIDIJWPCCCOJE-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB772
Local ready
Direct docking supported
E3L066122
LIG000692
ZXH-1-154
COc1ccc(NC2N=C(Nc3cccc4c3CN(C3CCC(=O)NC3=O)C4=O)C=CN2)cc1
C24H24N6O4
460.494000
JCUUURZVHHAXQB-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB685
Local ready
Direct docking supported
E3L066123
LIG000693
11
CC(C)(c1ccc(OCC2CCN(C(=O)CCCCOc3ccc4c(c3)C(=O)N(C3CCC(=O)NC3=O)C4=O)CC2)cc1)c1ccc(OC[C@H](O)CCl)cc1
C42H48ClN3O9
774.311000
JDEOVSDODMFTIN-XMGIQNEDSA-N - -
MolGlueDB
MolGlueDB:MGDB1542
Local ready
Direct docking supported
E3L066124
LIG000694
19
Nc1n[nH]c2c(CN3CC4COCC4C3)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc12
C26H27N7O4
501.547000
JDLIGRQSRGPCHF-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, MolGlueDB
BindingDB:BDBM755968; MolGlueDB:MGDB1510
Local ready
Direct docking supported
E3L066125
LIG000695
T14
O=C1CCC(N2C(=O)c3ccc(C#CCOCCOCCOCc4ccccc4)cc3C2=O)C(=O)N1
C27H26N2O7
490.512000
JDSMIZOEPCXRLN-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB948
Local ready
Direct docking supported