E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L067029
LIG001599
UOM-005476
O=C(Cc1ccc(NC(=O)c2ccncc2)cc1)Nc1ncc(SCc2cccnc2)s1
C23H19N5O2S2
461.572000
UVUUSOVTSRHTTI-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1494
Local ready
Direct docking supported
E3L067030
LIG001600
ALV-07-038-01
CC(=O)c1c(C)c2cnc(Nc3ccc(N4CCN(CCCCOc5cccc(CN6CCC(c7ccc8c(c7)CN(C7CCC(=O)NC7=O)C8=O)CC6)c5)CC4)cn3)nc2n(C2CCCC2)c1=O
C53H62N10O6
935.143000
UWMJNFLPBWWKOP-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1528
Local ready
Direct docking supported
E3L067031
LIG001601
14m
COc1ccc(CSCC2CCC(=O)NC2=O)cc1
C14H17NO3S
279.361000
UWYCETXDSZQZSS-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50625131; MolGlueDB:MGDB680
Local ready
Direct docking supported
E3L067032
LIG001602
30
CC(C)(c1ccc(OCc2cncnc2)cc1)c1cc(Cl)c(OCC2CCN(C(=O)CCCCNc3ccc4c(c3)C(=O)N(C3CCC(=O)NC3=O)C4=O)CC2)c(C#N)c1
C45H46ClN7O7
832.358000
UXIJPMLSAQRGCE-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1561
Local ready
Direct docking supported
E3L067033
LIG001603
LC-02-119
O=C1CC[C@H](N2Cc3cc(-c4cnn5ccc(NC6CCCCC6)nc45)ccc3C2=O)C(=O)N1
C25H26N6O3
458.522000
UYDLBNIXPOLYLS-FQEVSTJZSA-N - -
MolGlueDB
MolGlueDB:MGDB920
Local ready
Direct docking supported
E3L067034
LIG001604
QXG-6029
O=C1CCC(N2Cc3cc(-c4cc5ccccc5cn4)ccc3C2=O)C(=O)N1
C22H17N3O3
371.396000
UYLCECOIORPNBC-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1169
Local ready
Direct docking supported
E3L067036
LIG001606
24
Cn1nc(C2CCC(=O)NC2=O)c2ccc(N)cc21
C13H14N4O2
258.281000
UYLCMFFNTCBIBW-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, MolGlueDB
BindingDB:BDBM475139; MolGlueDB:MGDB583
Local ready
Direct docking supported
E3L067037
LIG001607
3A
O=C1CCC(N2Cc3ccc(-c4ccccc4)cc3C2=O)C(=O)N1
C19H16N2O3
320.348000
UZGVEFNBUJANDS-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1240
Local ready
Direct docking supported
E3L067038
LIG001608
69
O=C1CCC(N2C(=O)c3cccc(NC(=O)c4cccnc4)c3C2=O)C(=O)N1
C19H14N4O5
378.344000
UZKKKDIDZKECMB-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB976
Local ready
Direct docking supported
E3L067039
LIG001609
BETd-260
CCn1nc(C2CC2)cc1Nc1nc(C(=O)NCCCCCc2cccc3c2CN(C2CCC(=O)NC2=O)C3=O)nc2[nH]c3cc(-c4c(C)noc4C)c(OC)cc3c12
C43H46N10O6
798.905000
UZXANFBIRSYHGO-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB484
Local ready
Direct docking supported
E3L067040
LIG001610
Piperlongumine
COc1cc(/C=C/C(=O)N2CCC=CC2=O)cc(OC)c1OC
C17H19NO5
317.341000
VABYUUZNAVQNPG-BQYQJAHWSA-N Q14145 -
e3_ligand
e3_ligand:93
Local ready
Direct docking supported
E3L067041
LIG001611
FL4
O=C1CCC(N2C(=O)c3cccc(Nc4ccc(OS(=O)(=O)F)cc4)c3C2=O)C(=O)N1
C19H14FN3O7S
447.400000
VAPSRWQVLDMNPO-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1032
Local ready
Direct docking supported
E3L067042
LIG001612
C5
CCOC(=O)C1CCCN(C(=O)c2nn(-c3ccc(C)c(C)c3)c(=O)n(Cc3cccc(C(F)(F)F)c3)c2=O)C1
C28H29F3N4O5
558.557000
VBFRDSALBVVCTO-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1435
Local ready
Direct docking supported
E3L067043
LIG001613
LC-04-042
O=C1CC[C@H](N2Cc3cc(-c4cnc5n4CCN(Cc4ccccc4-c4ccncc4)C5)ccc3C2=O)C(=O)N1
C31H28N6O3
532.604000
VBKRTIAVDNIPSQ-SANMLTNESA-N - -
MolGlueDB
MolGlueDB:MGDB1267
Local ready
Direct docking supported
E3L067044
LIG001614
34d
CC(NC(=O)Nc1cccc(C(C)(C)C)c1)c1ccc2nnn(C3CCC(=O)NC3=O)c(=O)c2c1
C25H28N6O4
476.537000
VBVAZSILFWUVLI-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB183
Local ready
Direct docking supported
E3L067045
LIG001615
9f
Cc1ccc(NC(=O)OCc2ccc3c(c2)C(=O)N(C2CCC(=O)NC2=O)C3)cc1Cl
C22H20ClN3O5
441.871000
VCEJNBKFGYUOAV-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM653912; MolGlueDB:MGDB357
Local ready
Direct docking supported
E3L067046
LIG001616
ML 1-45
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)N1CCN(Cc3ccc(S(=O)(=O)F)cc3)CC1)c1nnc(C)n1-2
C30H30ClFN6O3S2
641.194000
VCODGJPJEJMVDC-VWLOTQADSA-N - -
MolGlueDB
MolGlueDB:MGDB252
Local ready
Direct docking supported
E3L067047
LIG001617
14
CC(C)c1n[nH]c2c(NCc3ccc(-n4cccn4)cc3)nc(SCC(O)CN)nc12
C21H26N8OS
438.561000
VCPPIWOVNDKKKF-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB144
Local ready
Direct docking supported
E3L067048
LIG001618
16
O=C1CCC(N2Cc3cc(NCc4ccc5ccncc5c4)ccc3C2=O)C(=O)N1
C23H20N4O3
400.438000
VCYLWQIKFZDQNX-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1230
Local ready
Direct docking supported
E3L067049
LIG001619
LC-04-041
O=C1CC[C@H](N2Cc3cc(-c4cnc5n4CCN(Cc4ccccc4-c4ccc(F)cc4)C5)ccc3C2=O)C(=O)N1
C32H28FN5O3
549.606000
VDRBYTCCIRUVHX-MHZLTWQESA-N - -
MolGlueDB
MolGlueDB:MGDB1266
Local ready
Direct docking supported