E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L067050
LIG001620
22f
Cc1cccc(NC(=O)NCc2ccc3nnn(C4CCC(=O)NC4=O)c(=O)c3c2)c1
C21H20N6O4
420.429000
VDYYPIFMTAMSGI-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB307
Local ready
Direct docking supported
E3L067051
LIG001621
SJPYT-229
COc1ccc(OC)c(-n2nnc(C(=O)Nc3cc(NCCNc4cccc5c4C(=O)N(C4CCC(=O)NC4=O)C5=O)cc(C(C)(C)C)c3)c2C)c1
C37H40N8O7
708.776000
VEGFQOMNZVNANA-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB688
Local ready
Direct docking supported
E3L067052
LIG001622
cmpd 4
O=C1CCC(N2Cc3cc(C4CCNCC4)ccc3C2=O)C(=O)N1
C18H21N3O3
327.384000
VETYNAAAOVQSDR-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1177
Local ready
Direct docking supported
E3L067053
LIG001623
LYG-301
O=C1CCC(N2Cc3cc(CNC(=O)c4coc5ccccc45)ccc3C2=O)C(=O)N1
C23H19N3O5
417.421000
VFCGWGHLKYNHQE-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1335
Local ready
Direct docking supported
E3L067054
LIG001624
compound 10
Cn1c(=O)n(C2CCC(=O)NC2=O)c2ccccc21
C13H13N3O3
259.265000
VFDZUWPTOYTMAL-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1, Protein cereblon
BindingDB, e3_ligand, MolGlueDB
BindingDB:BDBM557564; e3_ligand:89; MolGlueDB:MGDB545
Local ready
Direct docking supported
E3L067055
LIG001625
alpha-naphthoflavone
O=c1cc(-c2ccccc2)oc2c1ccc1ccccc12
C19H12O2
272.303000
VFMMPHCGEFXGIP-UHFFFAOYSA-N P35869 -
e3_ligand
e3_ligand:43
Local ready
Direct docking supported
E3L067056
LIG001626
CCT369260
C[C@@H]1CN(c2ncc(Cl)c(Nc3ccc4c(c3)n(CCC(C)(C)O)c(=O)n4C)n2)C[C@H](C)C1(F)F
C24H31ClF2N6O2
509.001000
VFNPUAOAEFMXQI-GASCZTMLSA-N P41182 B-cell lymphoma 6 protein
BindingDB, MolGlueDB
BindingDB:BDBM50511632; MolGlueDB:MGDB14
Local ready
Direct docking supported
E3L067057
LIG001627
FL3
O=C1CCC(N2C(=O)c3cccc(Nc4cccc(OS(=O)(=O)F)c4)c3C2=O)C(=O)N1
C19H14FN3O7S
447.400000
VFODQRZZHCBEKR-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1031
Local ready
Direct docking supported
E3L067058
LIG001628
dCeMM2
O=C(CSc1nnc2c(n1)[nH]c1ccccc12)Nc1ccc(Cl)cn1
C16H11ClN6OS
370.825000
VFWVTIHYVUKNGR-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB878
Local ready
Direct docking supported
E3L067060
LIG001630
18
Nc1ccc2c(c1)ncn2C1CCC(=O)NC1=O
C12H12N4O2
244.254000
VFZOAPWJMLHQTB-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB808
Local ready
Direct docking supported
E3L067061
LIG001631
4
NCCCCCCC#Cc1cc(N2C3CCC2CN(c2cc(-c4ccccc4O)nnc2N)C3)ccn1
C29H35N7O
497.647000
VGCMOQLBVXOZEB-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1314
Local ready
Direct docking supported
E3L067062
LIG001632
bestatin
CC(C)C[C@H](NC(=O)[C@@H](O)[C@H](N)Cc1ccccc1)C(=O)O
C16H24N2O4
308.378000
VGGGPCQERPFHOB-RDBSUJKOSA-N Q13490 -
e3_ligand
e3_ligand:38
Local ready
Direct docking supported
E3L067063
LIG001633
4
CCN1CCC[C@@H](Oc2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)C1
C20H25N3O4
371.437000
VGRDATXDONRIRI-LDCVWXEPSA-N - -
MolGlueDB
MolGlueDB:MGDB479
Local ready
Direct docking supported
E3L067064
LIG001634
3
CCN1CCC[C@H](Oc2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)C1
C20H25N3O4
371.437000
VGRDATXDONRIRI-MYJWUSKBSA-N - -
MolGlueDB
MolGlueDB:MGDB480
Local ready
Direct docking supported
E3L067065
LIG001635
31
O=C1CCC(N2C(=O)c3ccc(N4CCCC4)cc3C2=O)C(=O)N1
C17H17N3O4
327.340000
VGSPZZGXZPFXAS-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1007
Local ready
Direct docking supported
E3L067066
LIG001636
4f
COC(=O)c1nc(NC(=O)Cn2cnc(C)c(C)c2=O)sc1CCc1cccc(Cl)c1
C21H21ClN4O4S
460.943000
VHDNTPDGGOIXIT-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1476
Local ready
Direct docking supported
E3L067067
LIG001637
22s
O=C1CCC(n2nnc3ccc(CNC(=O)Nc4ccc5ncsc5c4)cc3c2=O)C(=O)N1
C21H17N7O4S
463.479000
VHZHDDNVTKAFFC-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1242
Local ready
Direct docking supported
E3L067068
LIG001638
LIG001638
O=C1NC(O)CCC1N1C(=O)c2ccccc2C1=O
C13H12N2O4
260.249000
VIJDKBYTZNYJHN-UHFFFAOYSA-N Q96SW2 -
e3_ligand
e3_ligand:141
Local ready
Direct docking supported
E3L067069
LIG001639
18
CCCCNc1ccc(C(=O)NC2CCC(=O)NC2=O)c(OC)c1
C17H23N3O4
333.388000
VIJYNGMYYHQSKH-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB446
Local ready
Direct docking supported
E3L067070
LIG001640
JP-2-247
COc1ccc(C(=O)/C=C/C(=O)N2CCC[C@@H](n3nc(-c4ccc(Oc5ccccc5)cc4)c4c(N)ncnc43)C2)cc1
C33H30N6O4
574.641000
VIQRYBMUDDUCDX-IKPXGLPCSA-N - -
MolGlueDB
MolGlueDB:MGDB649
Local ready
Direct docking supported