E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L067071
LIG001641
1G
CCCCNC(=O)c1cccc(-c2cccc3c2CN(C2CCC(=O)NC2=O)C3=O)c1
C24H25N3O4
419.481000
VJKMNVAQCKRJMO-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB442
Local ready
Direct docking supported
E3L067072
LIG001642
T04
O=C1CCC(N2C(=O)c3ccc(NC(=O)COCCOCCOCc4ccccc4)cc3C2=O)C(=O)N1
C26H27N3O8
509.515000
VJTDVVZONYAPKD-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB964
Local ready
Direct docking supported
E3L067073
LIG001643
CPD-2380
O=C1CCC(N2Cc3ccccc3C2)C(=O)N1
C13H14N2O2
230.267000
VJWHSCYAWWAUKE-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50631801; MolGlueDB:MGDB373
Local ready
Direct docking supported
E3L067074
LIG001644
HQ012
Cc1cccc(Nc2nc(CC(=O)Nc3nc(-c4ccco4)cs3)cs2)n1
C18H15N5O2S2
397.485000
VKFSMKZFUPIFKK-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB376
Local ready
Direct docking supported
E3L067075
LIG001645
9j
CCOc1ccc(C(=O)/C=C/C(=O)N2CCN(c3ccc(-n4nnc5c(=O)[nH]c6ccc(-c7ccc(OC)nc7)cc6c54)cc3C(F)(F)F)CC2)cc1
C38H32F3N7O5
723.712000
VKPBPJMGOHOGNF-FYWRMAATSA-N - -
MolGlueDB
MolGlueDB:MGDB497
Local ready
Direct docking supported
E3L067076
LIG001646
LC-04-087
O=C1CCC(N2Cc3cc(-c4ccn5ncc(Cl)c5n4)ccc3C2=O)C(=O)N1
C19H14ClN5O3
395.806000
VLQCOELYHBYNNI-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1172
Local ready
Direct docking supported
E3L067077
LIG001647
8a
Cn1c(=O)c2c(c3cc(Nc4nc(N5CCC(F)(F)[C@@H](O)C5)ncc4Cl)ccc31)N[C@H](C1CC1)C(F)(F)CO2
C25H25ClF4N6O3
568.959000
VMGLHACLWFOJMH-FXAWDEMLSA-N - -
MolGlueDB
MolGlueDB:MGDB531
Related BindingDB:BDBM50606284; Related BindingDB:BDBM50606283
Local ready
Direct docking supported
E3L067078
LIG001648
13
O=C1CCC(N2Cc3cc(NCc4ccc5c(c4)oc4ccccc45)ccc3C2=O)C(=O)N1
C26H21N3O4
439.471000
VMIRQGWKDHITLC-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1221
Local ready
Direct docking supported
E3L067079
LIG001649
DS37
CC[C@H](CO)Nc1nc(NCCC2CC2)c2ncn(C(C)C)c2n1
C17H28N6O
332.452000
VMOKEQKQFWUTBY-CYBMUJFWSA-N - -
MolGlueDB
MolGlueDB:MGDB1589
Local ready
Direct docking supported
E3L067080
LIG001650
LYG-403
O=C1CCC(N2Cc3cc(CNC(=O)C4=Cc5cc(F)ccc5OC4)ccc3C2=O)C(=O)N1
C24H20FN3O5
449.438000
VMTQISRZNBVQQV-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1346
Local ready
Direct docking supported
E3L067081
LIG001651
DS15
CC[C@H](CO)Nc1nc(NCCCCCc2cccc3ccccc23)c2ncn(C(C)C)c2n1
C27H36N6O
460.626000
VMZLWLKLMRYJFQ-JOCHJYFZSA-N - -
MolGlueDB
MolGlueDB:MGDB229
Local ready
Direct docking supported
E3L067082
LIG001652
3
Cc1c[nH]c2c(NS(=O)(=O)c3ccc(S(N)(=O)=O)cc3)cccc12
C15H15N3O4S2
365.436000
VNDZABLOJMIXEU-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1400
Local ready
Direct docking supported
E3L067083
LIG001653
11
CC[C@H](CO)Nc1nc(NCc2ccc(-c3cccc(F)n3)cc2)c2ncn(C(C)C)c2n1
C24H28FN7O
449.534000
VOBRFZVGCJOTHM-GOSISDBHSA-N - -
MolGlueDB
MolGlueDB:MGDB215
Local ready
Direct docking supported
E3L067084
LIG001654
6-OH-EM12
O=C1CCC(N2Cc3ccc(O)cc3C2=O)C(=O)N1
C13H12N2O4
260.249000
VOTVGZSDHZUGID-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50614098; MolGlueDB:MGDB1243
Local ready
Direct docking supported
E3L067085
LIG001655
Lib-D-5D
CN1CCN(c2ncc(/C=N/NC(=O)COc3ccccc3-c3cccc4c3CN(C3CCC(=O)N(C)C3=O)C4=O)s2)CC1
C31H33N7O5S
615.716000
VOVBTTGMFWENFX-ATZGPIRCSA-N - -
MolGlueDB
MolGlueDB:MGDB579
Local ready
Direct docking supported
E3L067086
LIG001656
cmp14
O=C1CCC(N2Cc3c(OCc4ccc(CN5CCN(c6ccc(F)cc6)CC5)cc4)cccc3C2=O)C(=O)N1
C31H31FN4O4
542.611000
VPQDIVZJFLZFOP-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1112
Local ready
Direct docking supported
E3L067087
LIG001657
ZXH-1-186
CC(C)[C@H](CO)Nc1nccc(Nc2cccc3c2CN(C2CCC(=O)NC2=O)C3=O)n1
C22H26N6O4
438.488000
VPQRVEXRSZBNQQ-BHWOMJMDSA-N - -
MolGlueDB
MolGlueDB:MGDB130
Local ready
Direct docking supported
E3L067088
LIG001658
LIG001658
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2[C@@H](F)[C@@H](O)CN2C(=O)[C@@H](NC(=O)C2(F)CC2)C(C)(C)S)cc1
C25H30F2N4O4S2
552.669000
VPUMMKBPIDPYKG-CGBFIWBNSA-N P40337 -
e3_ligand
e3_ligand:164
Local ready
Direct docking supported
E3L067089
LIG001659
17
COc1cc2nn([C@H]3CC[C@H](CN(C)CCCO[C@H]4C[C@H](Nc5cccc6c5C(=O)N(C5CCC(=O)NC5=O)C6=O)C4)CC3)cc2cc1NC(=O)c1cccc(C(F)(F)F)n1
C43H47F3N8O7
844.892000
VPXGVLREMMWXOO-LXKXFIAUSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50639842; MolGlueDB:MGDB742
Local ready
Direct docking supported
E3L067090
LIG001660
cmp61
O=C1CC[C@@H](N2Cc3c(OCc4ccc(CN5CCN(c6ccc(F)cc6F)CC5)cc4)cccc3C2=O)C(=O)N1
C31H30F2N4O4
560.601000
VQDRNQBRRSNVOR-HHHXNRCGSA-N - -
MolGlueDB
MolGlueDB:MGDB912
Local ready
Direct docking supported