E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L067260
LIG001830
LIG001830
O=C1C[C@H](NC(=O)[C@@H]2CCCN2)C(=O)N1
C9H13N3O3
211.221000
XPUKDCSSTSQWBG-WDSKDSINSA-N Q96SW2 -
e3_ligand
e3_ligand:120
Local ready
Direct docking supported
E3L067261
LIG001831
LIG001831
CC1(C)C(=O)N(C2CCC(=O)NC2=O)c2ccccc21
C15H16N2O3
272.304000
XQDXCKSIXIARKX-UHFFFAOYSA-N Q96SW2 -
e3_ligand
e3_ligand:158
Local ready
Direct docking supported
E3L067262
LIG001832
DS43
CC[C@H](CO)Nc1nc(NCc2ccn(-c3cccc(Cl)c3)n2)c2ncn(C(C)C)c2n1
C22H27ClN8O
454.966000
XQOCHZAMFJBROM-MRXNPFEDSA-N - -
MolGlueDB
MolGlueDB:MGDB1573
Local ready
Direct docking supported
E3L067263
LIG001833
54
Cn1ccc2cc(-c3cccc4c3C(=O)N(C3CCC(=O)NC3=O)C4=O)ccc21
C22H17N3O4
387.395000
XRDKPFOAELLOLN-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB560
Local ready
Direct docking supported
E3L067264
LIG001834
20c
Cc1ccc(S(=O)(=O)CC2CCC(=O)NC2=O)cc1
C13H15NO4S
281.333000
XRWKXCWLWRLPQL-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50625143; MolGlueDB:MGDB361
Local ready
Direct docking supported
E3L067265
LIG001835
LC-05-096(Neg)
CN1C(=O)CC[C@H](N2Cc3cc(-c4cnc5n4CCN(Cc4ccccc4-c4ccccc4Cl)C5)ccc3C2=O)C1=O
C33H30ClN5O3
580.088000
XRWQQUCCCDKFHB-NDEPHWFRSA-N - -
MolGlueDB
MolGlueDB:MGDB1278
Local ready
Direct docking supported
E3L067266
LIG001836
48
Cc1ccc(NC(=O)NCc2ccc(N3CCC(=O)NC3=O)cc2)cc1Cl
C19H19ClN4O3
386.839000
XSGVJWGNWAQBFH-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB347
Local ready
Direct docking supported
E3L067267
LIG001837
T13
O=C1CCC(N2C(=O)c3cccc(C#CCOCCOCCOCc4ccccc4)c3C2=O)C(=O)N1
C27H26N2O7
490.512000
XSKJTYYHDWURMD-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB970
Local ready
Direct docking supported
E3L067268
LIG001838
Z11
COc1ccc(C)cc1N1C[C@H](C(=O)Nc2nc3ccccc3[nH]2)CC1=O
C20H20N4O3
364.405000
XSNQFQPVHIAZMA-CYBMUJFWSA-N - -
MolGlueDB
MolGlueDB:MGDB661
Local ready
Direct docking supported
E3L067269
LIG001839
78
O=C1CCC(N2Cc3cc(NC(=O)C4=Cc5ccc(OC(F)(F)F)cc5OC4)ccc3C2=O)C(=O)N1
C24H18F3N3O6
501.417000
XSQZMTIDRIDBJN-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1207
Local ready
Direct docking supported
E3L067270
LIG001840
LC-03-052
O=C1CC[C@H](N2Cc3cc(-c4cnc5n4CCN(Cc4ccccc4-c4ccccc4)C5)ccc3C2=O)C(=O)N1
C32H29N5O3
531.616000
XTASMSXITLRQEH-MHZLTWQESA-N - -
MolGlueDB
MolGlueDB:MGDB1262
Local ready
Direct docking supported
E3L067271
LIG001841
ZXH-1-124
COc1ccc(OC)c(-c2nccc(NCC(=O)Nc3cccc4c3CN(C3CCC(=O)NC3=O)C4=O)n2)c1
C27H26N6O6
530.541000
XTBGZJDQIGZMSI-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM585782; MolGlueDB:MGDB686
Local ready
Direct docking supported
E3L067272
LIG001842
44
COc1ccc2cc(C(=O)Nc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)ccc2n1
C24H20N4O5
444.447000
XTFMZGLRKNVGSN-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB699
Local ready
Direct docking supported
E3L067273
LIG001843
24
Nc1nn(C2CC2)c2c(CN3CCCC3)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc12
C27H29N7O3
499.575000
XTOJEKXWALNRFH-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, MolGlueDB
BindingDB:BDBM755960; MolGlueDB:MGDB1515
Local ready
Direct docking supported
E3L067274
LIG001844
SRI-41315
Cn1c2ccccc2c(=O)c2c(=O)n(-c3ccccc3)c(C3CCC3)nc21
C22H19N3O2
357.413000
XUOTZAUZHWCGHL-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB562
Local ready
Direct docking supported
E3L067275
LIG001845
DD-1-073
COc1ccc(C(=O)/C=C/C(=O)N2CCN(C(=O)c3ccc(NC(=O)CCCCCCC(=O)NO)cc3)CC2)cc1
C30H36N4O7
564.639000
XUOZCDNTQACKLD-WUKNDPDISA-N - -
MolGlueDB
MolGlueDB:MGDB651
Local ready
Direct docking supported
E3L067276
LIG001846
3
CC12CC[C@H](O)CC1=CCC1C2CC[C@@]2(C)C(n3cnc4ccccc43)=CCC12Cl
C26H31ClN2O
423.000000
XUVXFMNMKNUNKI-WWFYVYFMSA-N - -
MolGlueDB
MolGlueDB:MGDB423
Local ready
Direct docking supported
E3L067277
LIG001847
21
O=C1CCC(N2Cc3cc(CNC(=O)Nc4ccccc4-c4ccccc4)ccc3C2=O)C(=O)N1
C27H24N4O4
468.513000
XVIIKLFZGSJDCQ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1057
Local ready
Direct docking supported
E3L067278
LIG001848
compound 14
COc1c(-c2cn(C3CCC(=O)NC3=O)nn2)csc1C(=O)O
C13H12N4O5S
336.329000
XVKGDHLDTXNEQJ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB615
Local ready
Direct docking supported
E3L067279
LIG001849
22
O=C1CCC(N2Cc3cc(CNC(=O)Nc4cc(Cl)cc(Cl)c4)ccc3C2=O)C(=O)N1
C21H18Cl2N4O4
461.305000
XVWPXDUKGHQJPV-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1186
Local ready
Direct docking supported