E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L067300
LIG001870
Lib-B-1B
O=C(COc1ccccc1-c1cccc2c1CN(C1CCC(=O)NC1=O)C2=O)N/N=C/c1c(-c2ccccc2)nc2n1CCS2
C33H28N6O5S
620.691000
YFGHWNQYMTUYHF-KVAAJVFYSA-N - -
MolGlueDB
MolGlueDB:MGDB867
Local ready
Direct docking supported
E3L067301
LIG001871
LC-04-043
O=C1CC[C@H](N2Cc3cc(-c4cnc5n4CCN(Cc4ccccc4-c4cccc(Cl)c4)C5)ccc3C2=O)C(=O)N1
C32H28ClN5O3
566.061000
YFKFZPCPTVQGLX-MHZLTWQESA-N - -
MolGlueDB
MolGlueDB:MGDB1268
Local ready
Direct docking supported
E3L067302
LIG001872
JP-2-201
CCCc1nn(C)c2c(=O)[nH]c(-c3cc(S(=O)(=O)N4CCN(C(=O)/C=C/C(=O)c5ccc(OC)cc5)CC4)ccc3OCC)nc12
C32H36N6O7S
648.742000
YGANIZBPLNWCOJ-FYWRMAATSA-N - -
MolGlueDB
MolGlueDB:MGDB439
Local ready
Direct docking supported
E3L067303
LIG001873
LC-02-116
O=C1CC[C@H](N2Cc3cc(-c4cnn5ccc(NCc6ccccc6)nc45)ccc3C2=O)C(=O)N1
C26H22N6O3
466.501000
YGLDMGSRTJAXRL-NRFANRHFSA-N - -
MolGlueDB
MolGlueDB:MGDB922
Local ready
Direct docking supported
E3L067304
LIG001874
18
CC(C)(c1ccc(OCCCCl)cc1)c1ccc(OCC2CCN(C(=O)CCCCNc3ccc4c(c3)C(=O)N(C3CCC(=O)NC3=O)C4=O)CC2)cc1
C42H49ClN4O7
757.328000
YGOVZZHCKHVSOP-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1549
Local ready
Direct docking supported
E3L067305
LIG001875
14r
Nc1cccc(SCC2CCC(=O)NC2=O)c1
C12H14N2O2S
250.323000
YGPLIXYOXPSSRZ-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50625136; MolGlueDB:MGDB796
Local ready
Direct docking supported
E3L067306
LIG001876
LL-K12-5
CC(=O)N1CCN(c2nc(NCc3nc4cc(Cl)c(Cl)cc4[nH]3)c3ncn(C(C)C)c3n2)CC1
C22H25Cl2N9O
502.410000
YHAKJTLQZMUPCS-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB65
Local ready
Direct docking supported
E3L067307
LIG001877
ZZ7-14-046
CC(=O)N1CCC[C@@H](Nc2ncc(Cl)c(Nc3ccccc3S(=O)(=O)C(C)C)n2)C1
C20H26ClN5O3S
451.980000
YHLDASHGDXSEDW-OAHLLOKOSA-N - -
MolGlueDB
MolGlueDB:MGDB61
Local ready
Direct docking supported
E3L067308
LIG001878
LIG001878
O=C1CCC(N2Cc3c(Cl)cccc3C2=O)C(=O)N1
C13H11ClN2O3
278.695000
YIARPOLJSNXULV-UHFFFAOYSA-N Q96SW2 -
e3_ligand
e3_ligand:168
Local ready
Direct docking supported
E3L067309
LIG001879
T08
O=C(CNc1ccc2c(c1)C(=O)N(C1CCC(=O)NC1=O)C2=O)NCCOCCOCCOCc1ccccc1
C28H32N4O8
552.584000
YIDFFIQKGGBBRV-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB863
Local ready
Direct docking supported
E3L067310
LIG001880
TMX-4113
CSc1cscc1-c1cn(C2CCC(=O)NC2=O)nn1
C12H12N4O2S2
308.388000
YIIUEHDPOPLUBR-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB757
Local ready
Direct docking supported
E3L067311
LIG001881
(5)-MS4078
Cc1cc(Nc2ncc(Cl)c(Nc3ccccc3S(=O)(=O)C(C)C)n2)c(OC(C)C)cc1C1CCN(CC(=O)NCCNc2ccc3c(c2)C(=O)N(C2CCC(=O)NC2=O)C3=O)CC1
C45H52ClN9O8S
914.486000
YITSBIJCNYEPBO-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB310
Local ready
Direct docking supported
E3L067312
LIG001882
LIG001882
CC[C@@H](NC(=O)[C@@H]1CCCN1C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)c1ccccc1
C24H38N4O3
430.593000
YIULOCFICSPXDR-OJAHFUOMSA-N - -
e3_ligand
e3_ligand:69
Local ready
Direct docking supported
E3L067313
LIG001883
QXG-133-2
O=C1CCC(N2Cc3cc(NC(=O)c4cc5ccccn5c4)ccc3C2=O)C(=O)N1
C22H18N4O4
402.410000
YIUQFXABLLXKGK-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1068
Local ready
Direct docking supported
E3L067315
LIG001885
ML 1-29
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)N1CCN(C(=O)c3ccc(C=O)c(O)c3)CC1)c1nnc(C)n1-2
C31H29ClN6O4S
617.131000
YJDZOMPJSXXLBY-DEOSSOPVSA-N - -
MolGlueDB
MolGlueDB:MGDB247
Local ready
Direct docking supported
E3L067316
LIG001886
10a
CC(=O)N[C@@H]1C[C@H](C)CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC(F)(F)[C@@H](C4CC4)N3)n2)C1
C28H32ClF2N7O3
588.059000
YJEGTRPXGMXUTO-NDGOPHNLSA-N - -
MolGlueDB
MolGlueDB:MGDB54
Related BindingDB:BDBM50606280; Related BindingDB:BDBM50606287
Local ready
Direct docking supported
E3L067317
LIG001887
ZXH-1-123
COc1cccc(-c2nccc(NCC(=O)Nc3cccc4c3CN(C3CCC(=O)NC3=O)C4=O)n2)c1
C26H24N6O5
500.515000
YJRPNRQDNBVRFI-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM585781; MolGlueDB:MGDB709
Local ready
Direct docking supported
E3L067318
LIG001888
29
COc1cccc2ccc(CNc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)cc12
C25H23N3O4
429.476000
YKFCLPVZTGRYIM-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB628
Local ready
Direct docking supported
E3L067319
LIG001889
ALV2
Cc1ccc(NC(=O)NC(C)(C)c2cccc(NC3=CC(=O)N(C4CCC(=O)NC4=O)C3=O)c2)cc1Cl
C26H26ClN5O5
523.977000
YKFHBIMJVFQOQL-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB341
Local ready
Direct docking supported
E3L067320
LIG001890
28
COc1ccc2ccc(CNc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)cc2c1
C25H23N3O4
429.476000
YKIYHEYSHLGTGN-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB705
Local ready
Direct docking supported