E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L006781
BDB006781
BDBM152983
COc1cc(C(=O)OCOC(=O)N[C@@H](C)C(=O)O)ccc1NC(=O)[C@@H]1NC(CC(C)(C)C)[C@](C#N)(c2ccc(Cl)cc2F)C1c1cccc(Cl)c1F
C36H36Cl2F2N4O8
761.606000
RYHJTAUBALMCKF-HHEKMEBNSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM152983
Local ready
Direct docking supported
E3L006782
BDB006782
BDBM152984
COc1cc(C(=O)OCOC(=O)OCCOCCOCCOCCOP(=O)(OCc2ccccc2)OCc2ccccc2)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@](C#N)(c2ccc(Cl)cc2F)[C@H]1c1cccc(Cl)c1F
C55H60Cl2F2N3O14P
1126.968000
KCHMCPSQIQIXLP-VDJKTMBMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM152984
Local ready
Direct docking supported
E3L006783
BDB006783
BDBM152985
COc1cc(C(=O)OCOC(=O)OCCOCCOCCOCCOP(=O)(O)O)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@](C#N)(c2ccc(Cl)cc2F)[C@H]1c1cccc(Cl)c1F
C41H48Cl2F2N3O14P
946.718000
IUYREOALPGFEDN-CXARVUNBSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM152985
Local ready
Direct docking supported
E3L006784
BDB006784
BDBM152986
COc1cc(C(=O)OCOP(=O)(O)O)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@](C#N)(c2ccc(Cl)cc2F)[C@H]1c1cccc(Cl)c1F
C32H32Cl2F2N3O8P
726.497000
LVICJYPXNWYEDV-ULWUHOHFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM152986
Local ready
Direct docking supported
E3L006785
BDB006785
BDBM152987
COc1cc(C(=O)OC(C)OC(=O)O[C@H]2[C@@H]([C@H]3COC(C)(C)O3)C[C@@H]3OC(C)(C)O[C@H]23)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@](C#N)(c2ccc(Cl)cc2F)[C@H]1c1cccc(Cl)c1F
C47H53Cl2F2N3O11
944.853000
ZBJSFVIISNQZHP-XSPMNBIQSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM152987
Local ready
Direct docking supported
E3L006786
BDB006786
BDBM152988
COc1cc(C(=O)OC(C)OC(=O)O[C@@H]2[C@@H](O)[C@@H](O)O[C@@H]2[C@H](O)CO)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@](C#N)(c2ccc(Cl)cc2F)[C@H]1c1cccc(Cl)c1F
C40H43Cl2F2N3O12
866.695000
PTCOXMZSJDPXTG-MQSURPJJSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM152988
Local ready
Direct docking supported
E3L006787
BDB006787
BDBM152989
COc1cc(C(=O)OC(C)OC(=O)OCCOCCOCCOCCOP(=O)(OCc2ccccc2)OCc2ccccc2)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@](C#N)(c2ccc(Cl)cc2F)[C@H]1c1cccc(Cl)c1F
C56H62Cl2F2N3O14P
1140.995000
FTKUBIPESMMDIO-GBYNSLPMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM152989
Local ready
Direct docking supported
E3L006788
BDB006788
BDBM152990
COc1cc(C(=O)OC(C)OC(=O)OCCOCCOCCOCCOP(=O)(O)O)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@](C#N)(c2ccc(Cl)cc2F)[C@H]1c1cccc(Cl)c1F
C42H50Cl2F2N3O14P
960.745000
YISUXAPYNWNVSI-WBESVULXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM152990
Local ready
Direct docking supported
E3L006789
BDB006789
BDBM152991
COc1cc(C(=O)O[C@H](C)OC(=O)N2CCOCC2)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@](C#N)(c2ccc(Cl)cc2F)[C@H]1c1cccc(Cl)c1F
C38H40Cl2F2N4O7
773.661000
HSPLQOYQAJREPF-FXTFUQPHSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM152991
Local ready
Direct docking supported
E3L006790
BDB006790
BDBM153742
O=C1Nc2ccc3ncsc3c2/C1=C/Nc1ccc(S(=O)(=O)Nc2ccccn2)cc1
C21H15N5O3S2
449.517000
GCYXEGSPUDSZJY-PTNGSMBKSA-N P51948 Cyclin-H
BindingDB
BindingDB:BDBM153742
Local ready
Direct docking supported
E3L006791
BDB006791
3-bromo-N-(3-(tert-butylamino)propyl)benzamide
CC(C)(C)NCCCNC(=O)c1cccc(Br)c1
C14H21BrN2O
313.239000
XUFUVCIZFNREBI-UHFFFAOYSA-N O43189, P29375, Q96T88, Q9BUL5 PHD finger protein 23, Lysine-specific demethylase 5A, E3 ubiquitin-protein ligase UHRF1, PHD finger protein 1
BindingDB, PubChem
BindingDB:BDBM154545; PubChem:CID78673861
Local ready
Direct docking supported
E3L006792
BDB006792
3-Bromo-N-(3-(dimethylamino)propyl)benzamide
CN(C)CCCNC(=O)c1cccc(Br)c1
C12H17BrN2O
285.185000
GXLXMBQWFDLFHM-UHFFFAOYSA-N O43189, P29375, Q96T88, Q9BUL5 PHD finger protein 23, E3 ubiquitin-protein ligase UHRF1, PHD finger protein 1, Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM154546; PubChem:CID3536787
Local ready
Direct docking supported
E3L006793
BDB006793
3-Bromo-N-(3-(isopropylamino)propyl)benzamide (3)
CC(C)NCCCNC(=O)c1cccc(Br)c1
C13H19BrN2O
299.212000
JMPVXLQYTKYEGQ-UHFFFAOYSA-N O43189, P29375, Q96T88, Q9BUL5 PHD finger protein 1, Lysine-specific demethylase 5A, E3 ubiquitin-protein ligase UHRF1, PHD finger protein 23
BindingDB, PubChem
BindingDB:BDBM154547; PubChem:CID91970634
Local ready
Direct docking supported
E3L006794
BDB006794
BDBM154548
CN(CCCNC(=O)c1cccc(Br)c1)C(C)(C)C
C15H23BrN2O
327.266000
XMDWPDKHPVHRDH-UHFFFAOYSA-N O43189, P29375, Q96T88, Q9BUL5 E3 ubiquitin-protein ligase UHRF1, PHD finger protein 23, PHD finger protein 1, Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM154548; PubChem:CID91970635
Local ready
Direct docking supported
E3L006795
BDB006795
3-Bromo-N-(3-(tert-butoxy)propyl)benzamide (5)
CC(C)(C)OCCCNC(=O)c1cccc(Br)c1
C14H20BrNO2
314.223000
NEZZIVMTUQKLDX-UHFFFAOYSA-N O43189, P29375, Q96T88, Q9BUL5 Lysine-specific demethylase 5A, E3 ubiquitin-protein ligase UHRF1, PHD finger protein 23, PHD finger protein 1
BindingDB, PubChem
BindingDB:BDBM154549; PubChem:CID91970636
Local ready
Direct docking supported
E3L006796
BDB006796
3-Bromo-N-[3-(1-pyrrolidinyl)propyl]benzamide
O=C(NCCCN1CCCC1)c1cccc(Br)c1
C14H19BrN2O
311.223000
QERUYQVMWBYZRE-UHFFFAOYSA-N O43189, P29375, Q96T88, Q9BUL5 PHD finger protein 1, Lysine-specific demethylase 5A, PHD finger protein 23, E3 ubiquitin-protein ligase UHRF1
BindingDB, PubChem
BindingDB:BDBM154550; PubChem:CID60668607
Local ready
Direct docking supported
E3L006797
BDB006797
BDBM154551
CC(C)(C)NCCCNS(=O)(=O)c1cccc(Br)c1
C13H21BrN2O2S
349.294000
RODGWPYKZDULCB-UHFFFAOYSA-N O43189, P29375, Q96T88, Q9BUL5 PHD finger protein 23, PHD finger protein 1, E3 ubiquitin-protein ligase UHRF1, Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM154551; PubChem:CID91970637
Local ready
Direct docking supported
E3L006798
BDB006798
BDBM154552
CC(C)(C)NCCCNCc1cccc(Br)c1
C14H23BrN2
299.256000
AHAZFMYWCXMHOO-UHFFFAOYSA-N O43189, P29375, Q96T88, Q9BUL5 PHD finger protein 23, Lysine-specific demethylase 5A, PHD finger protein 1, E3 ubiquitin-protein ligase UHRF1
BindingDB, PubChem
BindingDB:BDBM154552; PubChem:CID91970638
Local ready
Direct docking supported
E3L006799
BDB006799
BDBM154553
CC(C)(C)N1CCC(NC(=O)c2cccc(Br)c2)C1
C15H21BrN2O
325.250000
PCBLAONADKCHEN-UHFFFAOYSA-N O43189, P29375, Q96T88, Q9BUL5 Lysine-specific demethylase 5A, PHD finger protein 23, E3 ubiquitin-protein ligase UHRF1, PHD finger protein 1
BindingDB, PubChem
BindingDB:BDBM154553; PubChem:CID91970639
Local ready
Direct docking supported
E3L006800
BDB006800
BDBM154554
CC(C)(C)N1CCN(C(=O)c2cccc(Br)c2)CC1
C15H21BrN2O
325.250000
AIAVNBRCOLXLIC-UHFFFAOYSA-N O43189, P29375, Q96T88, Q9BUL5 PHD finger protein 23, Lysine-specific demethylase 5A, E3 ubiquitin-protein ligase UHRF1, PHD finger protein 1
BindingDB, PubChem
BindingDB:BDBM154554; PubChem:CID61072363
Local ready
Direct docking supported