E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L007321
BDB007321
US9073917, 12-comparative
CCOC(=O)c1[nH]cc2c1NC1=C(C(=O)CCC1)[C@@H]2c1ccc(Sc2nc3ccccc3[nH]2)o1
C25H22N4O4S
474.542000
QNOOVTZVMOOSAW-FQEVSTJZSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM167515; PubChem:CID59825726
Local ready
Direct docking supported
E3L007322
BDB007322
US9073917, 13-comparative
CCOC(=O)c1[nH]cc2c1NC1=C(C(=O)CCC1)C2c1ccc(Sc2nc3cccc(OC)c3[nH]2)o1
C26H24N4O5S
504.568000
VPEYPVPNDMIFEL-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM167516; PubChem:CID70645399
Local ready
Direct docking supported
E3L007323
BDB007323
Atuveciclib Racemate
COc1cc(F)ccc1-c1ncnc(Nc2cccc(CS(C)(=N)=O)c2)n1
C18H18FN5O2S
387.440000
ACWKGTGIJRCOOM-UHFFFAOYSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM168383; PubChem:CID71618220
Local ready
Direct docking supported
E3L007324
BDB007324
US9079913, MI-219-M1 (a)
CC(C)(C)C[C@H]1N[C@@H](C(=O)NCC[C@H](O)C=O)[C@H](c2cccc(Cl)c2)[C@@]12C(=O)Nc1cc(Cl)c(F)cc12
C27H30Cl2FN3O4
550.458000
QPYCEBILXYDNAA-NVHWNKAKSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM170236; PubChem:CID52937956
Local ready
Direct docking supported
E3L007325
BDB007325
US9079913, MI-219-M1 (b)
CC(C)(C)C[C@H]1N[C@@H](C(=O)NCCC(=O)CO)[C@H](c2cccc(Cl)c2)[C@@]12C(=O)Nc1cc(Cl)c(F)cc12
C27H30Cl2FN3O4
550.458000
BTYCSKWMQWEJJA-IDIXZGLXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM170237; PubChem:CID58254137
Local ready
Direct docking supported
E3L007326
BDB007326
BDBM170238
CC(C)(C)C[C@H]1N[C@@H](C(=O)NCC[C@H](O)CNC(C)(C)C)[C@H](c2cccc(Cl)c2)[C@@]12C(=O)Nc1cc(Cl)c(F)cc12
C31H41Cl2FN4O3
607.598000
FNTKIGXRRNDBFK-PYSFBUAXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM170238
Local ready
Direct docking supported
E3L007327
BDB007327
BDBM170239
CC(C)(C)C[C@H]1N[C@@H](C(=O)N[C@H]2CC[C@@H](O)C2)[C@H](c2cccc(Cl)c2)[C@@]12C(=O)Nc1cc(Cl)c(F)cc12
C28H32Cl2FN3O3
548.486000
UDBPZUUUYNGRLF-APQJWPKQSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM170239
Local ready
Direct docking supported
E3L007328
BDB007328
BDBM170240
CC(C)(C)C[C@H]1N[C@@H](C(=O)NCC[C@H](O)CN2CCCC2)[C@H](c2cccc(Cl)c2)[C@@]12C(=O)Nc1cc(Cl)c(F)cc12
C31H39Cl2FN4O3
605.582000
ZHVWMEBKCWCTFP-RFHZMROGSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM170240
Local ready
Direct docking supported
E3L007329
BDB007329
BDBM170241
CC(C)(C)C[C@H]1N[C@@H](C(=O)NCC[C@H](O)CN2CC[C@@H](O)C2)[C@H](c2cccc(Cl)c2)[C@@]12C(=O)Nc1cc(Cl)c(F)cc12
C31H39Cl2FN4O4
621.581000
BAFJGFAIIOXZDU-ZPPRXTSMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM170241
Local ready
Direct docking supported
E3L007330
BDB007330
US9079913, MI-519-31 (isomer of MI-519-30)
CC(O)C(O)CCNC(=O)[C@@H]1N[C@H](CC(C)(C)C)[C@]2(C(=O)Nc3cc(Cl)c(F)cc32)[C@H]1c1cccc(Cl)c1
C28H34Cl2FN3O4
566.501000
UEHPLMKQIFMLIS-GSIFIEQUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM170242; PubChem:CID58254230
Local ready
Direct docking supported
E3L007331
BDB007331
BDBM170244
CC(C)(C)C[C@H]1N[C@@H](C(=O)NCCN2CC[C@H](O)C2)[C@H](c2cccc(Cl)c2)[C@@]12C(=O)Nc1cc(Cl)c(F)cc12
C29H35Cl2FN4O3
577.528000
HQFBGVNJAFEMRY-HXXBZNTPSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM170244
Local ready
Direct docking supported
E3L007332
BDB007332
BDBM170245
CC(C)(C)C[C@H]1N[C@@H](C(=O)NCC2CC(O)C(O)C2)[C@H](c2cccc(Cl)c2)[C@@]12C(=O)Nc1cc(Cl)c(F)cc12
C29H34Cl2FN3O4
578.512000
IKJLGXJWRMJHJV-DZDCWBJOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM170245
Local ready
Direct docking supported
E3L007333
BDB007333
BDBM170247
CC(C)(C)C[C@H]1N[C@@H](C(=O)NCCCN2CCCC2)[C@H](c2cccc(Cl)c2)[C@@]12C(=O)Nc1cc(Cl)c(F)cc12
C30H37Cl2FN4O2
575.556000
DHBXLDIUCMEPHT-PYOQLBSMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM170247; PubChem:CID52937958
Local ready
Direct docking supported
E3L007334
BDB007334
BDBM170248
CNC(=O)[C@@H]1N[C@H](CC(C)(C)C)[C@]2(C(=O)Nc3cc(Cl)c(F)cc32)[C@H]1c1cccc(Cl)c1
C24H26Cl2FN3O2
478.395000
ZWEOYLUAGZCBIG-ZSTWQFLISA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM170248; PubChem:CID52937959
Local ready
Direct docking supported
E3L007335
BDB007335
BDBM170249
CC(C)(C)C[C@H]1N[C@@H](C(N)=O)[C@H](c2cccc(Cl)c2)[C@@]12C(=O)Nc1cc(Cl)c(F)cc12
C23H24Cl2FN3O2
464.368000
DVZPAIQQEUCBAR-KCESLBEFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM170249; PubChem:CID52937960
Local ready
Direct docking supported
E3L007336
BDB007336
BDBM170250
CC(C)(C)C[C@H]1N[C@@H](C(=O)NCCCN2CCCC2)[C@H](c2cccc(Cl)c2F)[C@@]12C(=O)Nc1cc(Cl)ccc12
C30H37Cl2FN4O2
575.556000
XVEOBAMHAVOBRR-HVHHDALESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM170250; PubChem:CID52937961
Local ready
Direct docking supported
E3L007337
BDB007337
BDBM170251
CC(C)(C)C[C@H]1N[C@@H](C(=O)NCCCN2CCCCC2)[C@H](c2cccc(Cl)c2F)[C@@]12C(=O)Nc1cc(Cl)ccc12
C31H39Cl2FN4O2
589.583000
CNLUPKVITANMJE-OHMLLRHZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM170251; PubChem:CID52937962
Local ready
Direct docking supported
E3L007338
BDB007338
BDBM170252
CC(C)N1CCN(CCCNC(=O)[C@@H]2N[C@H](CC(C)(C)C)[C@]3(C(=O)Nc4cc(Cl)ccc43)[C@H]2c2cccc(Cl)c2F)CC1
C33H44Cl2FN5O2
632.652000
BZSRXVQVRIIUDK-LWPCESSHSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM170252
Local ready
Direct docking supported
E3L007339
BDB007339
BDBM170253
CN1CCN(CCCNC(=O)[C@@H]2N[C@H](CC(C)(C)C)[C@]3(C(=O)Nc4cc(Cl)ccc43)[C@H]2c2cccc(Cl)c2F)CC1
C31H40Cl2FN5O2
604.598000
MEOBCNLOCHKAIY-OHMLLRHZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM170253
Local ready
Direct docking supported
E3L007340
BDB007340
BDBM170254
CC(C)(C)C[C@H]1N[C@@H](C(=O)NCCCN2CCN(C3CC3)CC2)[C@H](c2cccc(Cl)c2F)[C@@]12C(=O)Nc1cc(Cl)ccc12
C33H42Cl2FN5O2
630.636000
STTMNXBGPHZZKN-LWPCESSHSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM170254
Local ready
Direct docking supported