E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L008821
BDB008821
BDBM213878
Cc1ccc(Cl)c(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CCC4)c3n2Cc2ccc(C(F)(F)F)cc2)c1
C27H25ClF3N5O2
543.977000
UZGVAAHONXBOQH-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM213878; PubChem:CID118558916
Local ready
Direct docking supported
E3L008822
BDB008822
BDBM213879
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3ccc4c(c3)CCO4)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C28H26F3N5O3
537.542000
WZBUMNPGKMVKHG-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM213879; PubChem:CID118558999
Local ready
Direct docking supported
E3L008823
BDB008823
BDBM213880
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3cccc(C(F)(F)F)c3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C27H23F6N5O2
563.502000
BUXBMXZEEPWZLO-CQSZACIVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM213880; PubChem:CID90325607
Local ready
Direct docking supported
E3L008824
BDB008824
BDBM213881
COc1cc(C)cc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CCC4)c3n2Cc2ccc(C(F)(F)F)cc2)c1
C28H28F3N5O3
539.558000
MJRUKTGOFVRNBW-MRXNPFEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM213881; PubChem:CID90318214
Local ready
Direct docking supported
E3L008825
BDB008825
BDBM213882
COc1cc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CCC4)c3n2Cc2ccc(C(F)(F)F)cc2)ccc1Cl
C27H25ClF3N5O3
559.976000
NNMMJTGNAOSLLA-CQSZACIVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM213882; PubChem:CID90325521
Local ready
Direct docking supported
E3L008826
BDB008826
BDBM213883
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3ccc4c(c3)OCCN4C)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C29H29F3N6O3
566.584000
WVBDBMMKKCVCDG-MRXNPFEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM213883; PubChem:CID118558990
Local ready
Direct docking supported
E3L008827
BDB008827
BDBM213884
Cc1cccc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CCC4)c3n2Cc2ccc(C(F)(F)F)cc2)c1C
C28H28F3N5O2
523.559000
IFIJIGUWZHHALH-QGZVFWFLSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM213884; PubChem:CID90320133
Local ready
Direct docking supported
E3L008828
BDB008828
BDBM213886
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3cc(C(C)(C)C)cc(C(C)(C)C)c3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C34H40F3N5O2
607.721000
DTXJDEDSWYTXCY-LJQANCHMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM213886; PubChem:CID90325524
Local ready
Direct docking supported
E3L008829
BDB008829
BDBM213887
Cc1cc(OC(F)(F)F)ccc1-c1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1
C28H25F6N5O3
593.528000
MHCLOSXSQVRFQI-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM213887; PubChem:CID90320052
Local ready
Direct docking supported
E3L008830
BDB008830
BDBM213890
O=C1CCN1c1cc(Cc2n[nH]c(=O)c3c2CCCC3)ccc1F
C18H18FN3O2
327.359000
VNVAMXXJQPLBFP-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM213890; PubChem:CID25007229
Local ready
Direct docking supported
E3L008831
BDB008831
BDBM213891
O=C1CCN1c1cc(-c2n[nH]c(=O)c3c2CCCC3)ccc1F
C17H16FN3O2
313.332000
YZVYTBRTGNVMFI-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM213891; PubChem:CID59755767
Local ready
Direct docking supported
E3L008832
BDB008832
BDBM213892
O=C1CCCN1c1cc(Cc2n[nH]c(=O)c3c2CCCC3)ccc1F
C19H20FN3O2
341.386000
GWOBEUQZAWARGN-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM213892; PubChem:CID25006090
Local ready
Direct docking supported
E3L008833
BDB008833
BDBM213893
O=C1CCCN1c1cc(-c2n[nH]c(=O)c3c2CCCC3)ccc1F
C18H18FN3O2
327.359000
WDYJVIZMWQPCAY-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM213893; PubChem:CID25002577
Local ready
Direct docking supported
E3L008834
BDB008834
BDBM213894
NCC(=O)Nc1cccc(Cc2n[nH]c(=O)c3c2CCCC3)c1
C17H20N4O2
312.373000
JPGAICHOIDVIQB-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM213894; PubChem:CID59830120
Local ready
Direct docking supported
E3L008835
BDB008835
BDBM213895
NCC(=O)Nc1cc(Cc2n[nH]c(=O)c3c2CCCC3)ccc1F
C17H19FN4O2
330.363000
HDGYJISUWFYFTJ-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM213895; PubChem:CID25006087
Local ready
Direct docking supported
E3L008836
BDB008836
BDBM213896
O=C(Nc1cccc(Cc2n[nH]c(=O)c3c2CCCC3)c1)C1CNC1
C19H22N4O2
338.411000
ZUEKLDWXQATXFJ-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM213896; PubChem:CID59830113
Local ready
Direct docking supported
E3L008837
BDB008837
BDBM213897
O=C(Nc1cc(Cc2n[nH]c(=O)c3c2CCCC3)ccc1F)C1CNC1
C19H21FN4O2
356.401000
JSBBKNLIIQFNOK-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM213897; PubChem:CID25006091
Local ready
Direct docking supported
E3L008838
BDB008838
BDBM213898
COc1ccc(C(=O)CCC(=O)Nc2cccc(Cc3n[nH]c(=O)c4c3CCCC4)c2)cc1
C26H27N3O4
445.519000
AMCZIPHXRVMECL-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM213898; PubChem:CID59755761
Local ready
Direct docking supported
E3L008839
BDB008839
BDBM213899
COc1ccc(C(=O)CCC(=O)Nc2cc(Cc3n[nH]c(=O)c4c3CCCC4)ccc2F)cc1
C26H26FN3O4
463.509000
BQDKGYHLBBLGAK-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM213899; PubChem:CID25006845
Local ready
Direct docking supported
E3L008840
BDB008840
BDBM213900
O=C1CCCN1c1cccc(Cc2n[nH]c(=O)c3c2CCCC3)c1
C19H21N3O2
323.396000
NGUPYQTYOPNTLK-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM213900; PubChem:CID59755745
Local ready
Direct docking supported