E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L010841
BDB010841
BDBM224757
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(C3CCCCC3O)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C27H39N7O3
509.655000
MISFBTPLMQGIJL-PQLJQCGPSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224757
Local ready
Direct docking supported
E3L010842
BDB010842
BDBM224760
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(C3(c4cccc(F)c4)CC3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C30H36FN7O2
545.663000
OEWOOVSDAOLYPR-GUDVDZBRSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224760
Local ready
Direct docking supported
E3L010843
BDB010843
BDBM224761
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(C(C)(O)c3cscn3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C26H34N8O3S
538.678000
PNEHWVATSWGZCX-YHPZBCERSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224761
Local ready
Direct docking supported
E3L010844
BDB010844
BDBM224764
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(C3(c4ccncc4)CC3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C29H36N8O2
528.661000
VASFAFPHXOQDLX-GUDVDZBRSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224764
Local ready
Direct docking supported
E3L010845
BDB010845
BDBM224765
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(C3(c4cscn4)CC3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C27H34N8O2S
534.690000
NTFVJDVNAGNOLV-BRWVUGGUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224765
Local ready
Direct docking supported
E3L010846
BDB010846
BDBM224766
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(C(C)(O)c3cn(C)cn3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C27H37N9O3
535.653000
RHCNWGSRRHAHCL-QYGAUDADSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224766
Local ready
Direct docking supported
E3L010847
BDB010847
BDBM224767
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(C(C)(O)c3nccs3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C26H34N8O3S
538.678000
HERTWRMHSKZFJU-YHPZBCERSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224767
Local ready
Direct docking supported
E3L010848
BDB010848
BDBM224768
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(C(O)C3CCC3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C26H37N7O3
495.628000
YBEQPWZBZOSMOA-GLOJTFSJSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224768
Local ready
Direct docking supported
E3L010849
BDB010849
BDBM224770
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(C3(c4nccs4)CC3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C27H34N8O2S
534.690000
CAIVHBYICLQWGY-BRWVUGGUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224770
Local ready
Direct docking supported
E3L010850
BDB010850
BDBM224846
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(C(O)(CO)c3ccccc3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C29H37N7O4
547.660000
SFWPUYVZGIWJKF-AGSQVQQYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224846
Local ready
Direct docking supported
E3L010851
BDB010851
BDBM224851
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(C(C)(F)c3ccccc3F)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C29H35F2N7O2
551.642000
XCADISPPPMQTDK-VOMCSHPCSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224851
Local ready
Direct docking supported
E3L010852
BDB010852
BDBM224856
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(C3(c4cnn(C)c4)CC3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C28H37N9O2
531.665000
OXYCTWKWXOADGM-KZNAEPCWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224856
Local ready
Direct docking supported
E3L010853
BDB010853
BDBM224884
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(C3(O)CCOCC3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C26H37N7O4
511.627000
CVBWVSVCVWGPNV-BRWVUGGUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224884
Local ready
Direct docking supported
E3L010854
BDB010854
BDBM224888
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(C(F)c3ccccc3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C28H34FN7O2
519.625000
BUPHVYHRNNVQJQ-WYKVRPKTSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224888
Local ready
Direct docking supported
E3L010855
BDB010855
BDBM224901
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(C3(O)CCC3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C25H35N7O3
481.601000
MAHPCLNEUZLGSB-BZUAXINKSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224901
Local ready
Direct docking supported
E3L010856
BDB010856
BDBM224910
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(C3(F)CCC3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C25H34FN7O2
483.592000
AKEYHBCMROZMFU-BZUAXINKSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224910
Local ready
Direct docking supported
E3L010857
BDB010857
BDBM224926
COC1(c2nc3nc(-c4noc(=O)[nH]4)nc(N[C@H](C)C4CCC4)c3n2C[C@H]2CC[C@H](C)CC2)CCC1
C26H37N7O3
495.628000
JKLVFSHKQYLOGE-BRWVUGGUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224926
Local ready
Direct docking supported
E3L010858
BDB010858
BDBM224986
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(C3CCC3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C25H35N7O2
465.602000
UZYDRNXKEUKDQJ-BZUAXINKSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224986
Local ready
Direct docking supported
E3L010859
BDB010859
BDBM225026
CC(c1ccccn1)c1nc2nc(-c3noc(=O)[nH]3)nc(N[C@H](C)C3CCC3)c2n1C[C@H]1CC[C@H](C)CC1
C28H36N8O2
516.650000
PPWJJTQTFXUAKH-CEBOQPEMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM225026
Local ready
Direct docking supported
E3L010860
BDB010860
Eed226
CS(=O)(=O)c1ccc(-c2cnc(NCc3ccco3)n3cnnc23)cc1
C17H15N5O3S
369.406000
DYIRSNMPIZZNBK-UHFFFAOYSA-N O14965, O75530, O96028, P51617, P61964, Q03164, Q09028, Q15291, Q96L73, Q9BQA1, Q9BZ95 Histone-lysine N-methyltransferase NSD3, Polycomb protein EED, Interleukin-1 receptor-associated kinase 1, Protein arginine N-methyltransferase 5, Histone-lysine N-methyltransferase EZH2, WD repeat-containing protein 5, Histone-lysine N-methyltransferase NSD2, Histone-lysine N-methyltransferase, H3 lysine-36 specific, Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM225230; PubChem:CID123132228
Local ready
Direct docking supported