E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L011101
BDB011101
BDBM227742
CCCCCN(C)c1nc(C(=O)O)nc2nc(-c3cccc(C)c3)n(Cc3ccc(C(F)(F)F)cc3)c12
C27H28F3N5O2
511.548000
QFYWQZNCIYKUCM-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM227742; PubChem:CID90318316
Local ready
Direct docking supported
E3L011102
BDB011102
BDBM227743
Cc1cccc(-c2nc3nc(C(=O)O)nc(N4CCCC4C4CCC4)c3n2Cc2ccc(C(F)(F)F)cc2)c1
C29H28F3N5O2
535.570000
YJKYVHSYOAOEFI-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM227743; PubChem:CID90317726
Local ready
Direct docking supported
E3L011103
BDB011103
BDBM227744
Cc1cccc(-c2nc3nc(C(=O)O)nc(N4CCC4C4CCC4)c3n2Cc2ccc(C(F)(F)F)cc2)c1
C28H26F3N5O2
521.543000
MCNCBYLYIRFVBE-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM227744; PubChem:CID90318479
Local ready
Direct docking supported
E3L011104
BDB011104
Mitoglitazone
CCc1ccc(C(=O)COc2ccc(CC3SC(=O)NC3=O)cc2)nc1
C19H18N2O4S
370.430000
IRNJSRAGRIZIHD-UHFFFAOYSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM228129; PubChem:CID10429242
Local ready
Direct docking supported
E3L011105
BDB011105
BDBM228130
Nc1cc(C(F)(F)F)c(-c2nc(N3CCOCC3)c3c(n2)N2CCOC[C@H]2C3)cn1
C19H21F3N6O2
422.411000
VEUJAZRDHNBJQE-LLVKDONJSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB, PubChem
BindingDB:BDBM228130; PubChem:CID118000135
Local ready
Direct docking supported
E3L011106
BDB011106
BDBM228152
Nc1ncc(-c2nc(N3CCOCC3)c3c(n2)N2CCOC[C@H]2C3)cn1
C17H21N7O2
355.402000
WLHXVOYGBREFJO-GFCCVEGCSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB, PubChem
BindingDB:BDBM228152; PubChem:CID118000155
Local ready
Direct docking supported
E3L011107
BDB011107
BDBM228153
Nc1cc(C(F)(F)F)c(-c2nc(N3CCOCC3)c3c(n2)N2CCOC[C@@H]2C3)cn1
C19H21F3N6O2
422.411000
VEUJAZRDHNBJQE-NSHDSACASA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB, PubChem
BindingDB:BDBM228153; PubChem:CID118000139
Local ready
Direct docking supported
E3L011108
BDB011108
BDBM228154
Nc1ncc(-c2nc(N3CCOCC3)c3c(n2)N2CCOC[C@@H]2C3)cn1
C17H21N7O2
355.402000
WLHXVOYGBREFJO-LBPRGKRZSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB, PubChem
BindingDB:BDBM228154; PubChem:CID91668221
Local ready
Direct docking supported
E3L011109
BDB011109
BDBM228156
Nc1ncc(-c2nc(N3CCOCC3)nc3c2C[C@@H]2COCCN32)cn1
C17H21N7O2
355.402000
KDKHUZABTIJMDY-GFCCVEGCSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB, PubChem
BindingDB:BDBM228156; PubChem:CID118000151
Local ready
Direct docking supported
E3L011110
BDB011110
BDBM228158
Nc1ncc(-c2nc(N3CCOCC3)nc3c2C[C@H]2COCCN32)cn1
C17H21N7O2
355.402000
KDKHUZABTIJMDY-LBPRGKRZSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB, PubChem
BindingDB:BDBM228158; PubChem:CID118000048
Local ready
Direct docking supported
E3L011111
BDB011111
BDBM228590
CN[C@@H](C)C(=O)N[C@H](C(=O)N1c2ncccc2C[C@H]1CNC(=O)c1ccccc1)C(C)C
C24H31N5O3
437.544000
RJWKBXICIIIARA-VDGAXYAQSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM228590; PubChem:CID76902766
Local ready
Direct docking supported
E3L011112
BDB011112
BDBM228591
CN[C@@H](C)C(=O)N[C@H](C(=O)N1c2ncccc2C[C@H]1CNC(C)=O)C(C)C
C19H29N5O3
375.473000
SHSNGKZXZBGSLA-RCBQFDQVSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM228591; PubChem:CID117888130
Local ready
Direct docking supported
E3L011113
BDB011113
BDBM228592
CNC(=O)NC[C@@H]1Cc2cccnc2N1C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)C
C19H30N6O3
390.488000
DNDOKHQQWLFLBD-QEJZJMRPSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM228592; PubChem:CID117888137
Local ready
Direct docking supported
E3L011114
BDB011114
BDBM228593
CN[C@@H](C)C(=O)N[C@H](C(=O)N1c2ncccc2C[C@H]1CNC(=O)Cc1ccccc1)C(C)C
C25H33N5O3
451.571000
XFVQREUYFZAMJL-XJABCFGWSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM228593; PubChem:CID73777099
Local ready
Direct docking supported
E3L011115
BDB011115
BDBM228594
CN[C@@H](C)C(=O)N[C@H](C(=O)N1c2ncccc2C[C@H]1CNC(=O)OC)C(C)C
C19H29N5O4
391.472000
ZDWCGZXOBQMPMU-QEJZJMRPSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM228594; PubChem:CID73777124
Local ready
Direct docking supported
E3L011116
BDB011116
BDBM228595
CN[C@@H](C)C(=O)N[C@H](C(=O)N1c2ncccc2C[C@H]1CNC(=O)N(C)C)C(C)C
C20H32N6O3
404.515000
WZRSIBRMVURXEQ-BPUTZDHNSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM228595; PubChem:CID73777101
Local ready
Direct docking supported
E3L011117
BDB011117
BDBM228596
CN[C@@H](C)C(=O)N[C@H](C(=O)N1c2ncccc2C[C@H]1CNC(=O)Nc1ccccc1)C(C)C
C24H32N6O3
452.559000
QTCYNUCDNBZLFI-VDGAXYAQSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM228596; PubChem:CID73777103
Local ready
Direct docking supported
E3L011118
BDB011118
BDBM228597
CN[C@@H](C)C(=O)N[C@H](C(=O)N1c2ncccc2C[C@H]1CNC(=O)[C@@H](C)c1ccccc1)C(C)C
C26H35N5O3
465.598000
HAXZTIUXLDHRTE-GPHNJDIKSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM228597; PubChem:CID127053762
Local ready
Direct docking supported
E3L011119
BDB011119
BDBM228598
CN[C@@H](C)C(=O)N[C@H](C(=O)N1c2ncccc2C[C@H]1CNS(C)(=O)=O)C(C)C
C18H29N5O4S
411.528000
AQPFZOROSFELID-QEJZJMRPSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM228598; PubChem:CID73777107
Local ready
Direct docking supported
E3L011120
BDB011120
BDBM228599
CN[C@@H](C)C(=O)N[C@H](C(=O)N1c2ncccc2C[C@H]1CNS(=O)(=O)c1ccccc1)C(C)C
C23H31N5O4S
473.599000
YEKKUTCQUXWIQW-QRFRQXIXSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM228599; PubChem:CID73777109
Local ready
Direct docking supported