E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L011981
BDB011981
BDBM243145
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(CO)cc2)c2ccccc2N(Cc2c(C)ccc3ccccc23)C1=O
C33H34N4O4
550.659000
YLMVDIJXVNORMX-DWACAAAGSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM243145
Local ready
Direct docking supported
E3L011982
BDB011982
BDBM243146
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)Cc2ccncc2)c2ccccc2N(Cc2c(C)ccc3ccccc23)C1=O
C32H33N5O3
535.648000
FDPGTHGFKUIWGT-CUNXSJBXSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243146; PubChem:CID118077132
Local ready
Direct docking supported
E3L011983
BDB011983
BDBM243147
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(S(C)(=O)=O)cc2)c2ccccc2N(Cc2c(C)ccc3ccccc23)C1=O
C33H34N4O5S
598.725000
BDRQBDDODAYDGS-DWACAAAGSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243147; PubChem:CID118077270
Local ready
Direct docking supported
E3L011984
BDB011984
BDBM243148
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)CCCC(C)=O)c2ccccc2N(Cc2c(C)ccc3ccccc23)C1=O
C31H36N4O4
528.653000
HYNQGODBKQUEBT-NVQXNPDNSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243148; PubChem:CID118076927
Local ready
Direct docking supported
E3L011985
BDB011985
BDBM243149
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)CCCCC(=O)OC)c2ccccc2N(Cc2c(C)ccc3ccccc23)C1=O
C32H38N4O5
558.679000
XQQUXXXVYVMKQR-NVQXNPDNSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243149; PubChem:CID118086577
Local ready
Direct docking supported
E3L011986
BDB011986
BDBM243150
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C(C)=O)cc2)c2ccccc2N(Cc2c(C)ccc3ccccc23)C1=O
C34H34N4O4
562.670000
FPRVCZFEMZUZRG-ZTOMLWHTSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243150; PubChem:CID118077058
Local ready
Direct docking supported
E3L011987
BDB011987
BDBM243151
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2cc(OC)c(OC)c(OC)c2)c2ccccc2N(Cc2c(C)ccc3ccccc23)C1=O
C35H38N4O6
610.711000
FKGOLBNZPGUDLK-CUNXSJBXSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243151; PubChem:CID118077083
Local ready
Direct docking supported
E3L011988
BDB011988
BDBM243153
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)CC2CCCCC2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C33H39BrN4O4
635.603000
HOWYCYQWHUQOKN-IDISGSTGSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243153; PubChem:CID118076592
Local ready
Direct docking supported
E3L011989
BDB011989
BDBM243154
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C(=O)C(C)(C)C)cc2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C37H39BrN4O5
699.646000
MUQICRLQVBPRHX-ZTOMLWHTSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM243154
Local ready
Direct docking supported
E3L011990
BDB011990
BDBM243155
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C(O)(O)C(F)(F)F)cc2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C34H32BrF3N4O6
729.550000
IWJPRIOMVNDBCD-SIBVEZHUSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM243155
Local ready
Direct docking supported
E3L011991
BDB011991
BDBM243156
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2cccc(C(C)=O)c2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C34H33BrN4O5
657.565000
IVEUPPZQAPDURZ-MMTVBGGISA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243156; PubChem:CID118076580
Local ready
Direct docking supported
E3L011992
BDB011992
BDBM243158
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)CCC[N+](=O)[O-])c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C29H32BrN5O6
626.508000
QJQMISPLQCHSJK-MBSDFSHPSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243158; PubChem:CID118076613
Local ready
Direct docking supported
E3L011993
BDB011993
BDBM243159
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)Cc2ccc(C(C)=O)cc2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C35H35BrN4O5
671.592000
XMPOAIGUDMFLDI-LGGPFLRQSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243159; PubChem:CID118076843
Local ready
Direct docking supported
E3L011994
BDB011994
BDBM243161
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)CC23CC4CC(CC(C4)C2)C3)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C37H43BrN4O4
687.679000
VJWPAPXXAYSAMG-CCDDUJHJSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243161; PubChem:CID118076947
Local ready
Direct docking supported
E3L011995
BDB011995
BDBM243162
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)CCNC(=O)OCC2c3ccccc3-c3ccccc32)c2ccccc2N(Cc2c(OC)ccc3cc(C(=O)OC)ccc23)C1=O
C45H45N5O8
783.882000
GWKUSTCKPNGPPM-ZSQPVGNWSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM243162
Local ready
Direct docking supported
E3L011996
BDB011996
BDBM243163
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C(C)=O)cc2)c2ccccc2N(Cc2c(OC(F)F)ccc3ccccc23)C1=O
C34H32F2N4O5
614.649000
KWNFZHZGDAFIFB-DCFHFQCYSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243163; PubChem:CID118076623
Local ready
Direct docking supported
E3L011997
BDB011997
BDBM243164
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C(C)=O)cc2)c2ccccc2N(Cc2cc(=O)oc3cc(OC)ccc23)C1=O
C33H32N4O7
596.640000
OKXQCWANIDVLSR-SIBVEZHUSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243164; PubChem:CID118076915
Local ready
Direct docking supported
E3L011998
BDB011998
BDBM243165
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C(C)=O)cc2)c2ccccc2N(Cc2noc3ccccc23)C1=O
C30H29N5O5
539.592000
CWPDYSFTIMRFCO-UUOWRZLLSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243165; PubChem:CID118077234
Local ready
Direct docking supported
E3L011999
BDB011999
BDBM243166
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C(C)=O)cc2)c2ccccc2N(Cc2noc3cc(Br)ccc23)C1=O
C30H28BrN5O5
618.488000
VVIQSBJMQJDHMV-XDHUDOTRSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243166; PubChem:CID118077208
Local ready
Direct docking supported
E3L012000
BDB012000
BDBM243167
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C(C)=O)cc2)c2ccccc2N(Cc2c(OC)ccc3c(Br)cccc23)C1=O
C34H33BrN4O5
657.565000
FCBDCRIHHVUGDE-MMTVBGGISA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243167; PubChem:CID118077140
Local ready
Direct docking supported