E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L012021
BDB012021
BDBM246383
[H]/N=C(/OC)c1nc2ccc3ncnc(Nc4ccc(OC)cc4F)c3c2s1
C18H14FN5O2S
383.408000
RYBNARZBIXTFJS-CAPFRKAQSA-N Q92630 Dual specificity tyrosine-phosphorylation-regulated kinase 2
BindingDB
BindingDB:BDBM246383
Local ready
Direct docking supported
E3L012022
BDB012022
US9447092, Comparator 1, Example 56
Cn1cc(-c2nc3c(N4CCN(Cc5cccnc5)CC4)c(Br)cnc3[nH]2)cn1
C20H21BrN8
453.348000
KLCAJPNNJWCSJD-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM247367; PubChem:CID57897195
Local ready
Direct docking supported
E3L012023
BDB012023
US9447092, Comparator 2, Example 57
Cc1nn(C)c(C)c1-c1nc2c(N3CCN(Cc4cccnc4)CC3)c(Br)cnc2[nH]1
C22H25BrN8
481.402000
BMSHQZWQPJMOJN-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM247368; PubChem:CID57897151
Local ready
Direct docking supported
E3L012024
BDB012024
BDBM247369
Cc1nn(C)cc1-c1nc2c(N3CCN(Cc4ncon4)CC3)c(Cl)cnc2[nH]1
C18H20ClN9O
413.873000
MGSYURQJRSJRFB-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM247369; PubChem:CID71454277
Local ready
Direct docking supported
E3L012025
BDB012025
BDBM247370
Cc1nc(CN2CCN(c3c(Cl)cnc4[nH]c(-c5cn(C)nc5C)nc34)CC2)no1
C19H22ClN9O
427.900000
ZYQKMYRXVHUATB-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM247370; PubChem:CID71463198
Local ready
Direct docking supported
E3L012026
BDB012026
BDBM247371
Cc1nn(C)cc1-c1nc2c(N3CCN(Cc4ccc(Cl)cc4)CC3)c(Cl)cnc2[nH]1
C22H23Cl2N7
456.381000
AKJBLKUZXRMECW-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM247371; PubChem:CID71454279
Local ready
Direct docking supported
E3L012027
BDB012027
Milvexian
C[C@@H]1CCC[C@H](n2cnc(-c3cc(Cl)ccc3-n3cc(Cl)nn3)cc2=O)c2cc(ccn2)-c2c(cnn2C(F)F)NC1=O
C28H23Cl2F2N9O2
626.455000
FSWFYCYPTDLKON-CMJOXMDJSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM247411; PubChem:CID118277544
Local ready
Direct docking supported
E3L012028
BDB012028
BDBM249160
CN[C@@H](C)C(=O)N[C@@H](Cc1ccc(OCc2ccc(C(=O)N[C@H]3C[C@@H](C(=O)NC4CCCc5ccccc54)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C3)cc2)cc1)C(=O)N1Cc2ccccc2C[C@H]1C(=O)NC1CCCc2ccccc21
C66H81N9O8
1128.429000
ZHTVSVKDYKAOKU-UEXYXWOPSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM249160
Local ready
Direct docking supported
E3L012029
BDB012029
BDBM249161
CN[C@@H](C)C(=O)N[C@@H](Cc1ccc(OCc2ccc(C(=O)NC3C[C@@H](C(=O)NC4CCCc5ccccc54)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C3)cc2)cc1)C(=O)N1CCCC1C(=O)N[C@@H]1CCCc2ccccc21
C61H79N9O8
1066.358000
GOHJXSANROHRRJ-PPXCOOFNSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM249161
Local ready
Direct docking supported
E3L012030
BDB012030
BDBM249162
CN[C@@H](C)C(=O)N[C@@H](Cc1ccc(OCc2ccc(C(=O)NC3C[C@@H](C(=O)NC4CCCc5ccccc54)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C3)cc2)cc1)C(=O)N1CCCCC1C(=O)N[C@@H]1CCCc2ccccc21
C62H81N9O8
1080.385000
NVGMOAJZXINBNS-RKDFGVOUSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM249162
Local ready
Direct docking supported
E3L012031
BDB012031
BDBM249163
CN[C@@H](C)C(=O)N[C@@H](Cc1ccc(OCc2ccc(C(=O)NC3C[C@@H](C(=O)NC4CCCc5ccccc54)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C3)cc2)cc1)C(=O)N1CC=CCC1C(=O)N[C@@H]1CCCc2ccccc21
C62H79N9O8
1078.369000
OCXMUZCIKTZSBR-RKDFGVOUSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM249163
Local ready
Direct docking supported
E3L012032
BDB012032
BDBM249164
CN[C@@H](C)C(=O)N[C@@H](Cc1ccc(OCc2ccc(C(=O)NC3C[C@@H](C(=O)NC4CCCc5ccccc54)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C3)c(F)c2)cc1)C(=O)N1Cc2ccccc2CC1C(=O)N[C@@H]1CCCc2ccccc21
C66H80FN9O8
1146.419000
YABVBGJSJAOFOT-IBVOZTSHSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM249164
Local ready
Direct docking supported
E3L012033
BDB012033
BDBM249165
CN[C@@H](C)C(=O)N[C@@H](Cc1ccc(Oc2ccc(C(=O)NC3C[C@@H](C(=O)NC4CCCc5ccccc54)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C3)cc2)cc1)C(=O)N1Cc2ccccc2CC1C(=O)N[C@@H]1CCCc2ccccc21
C65H79N9O8
1114.402000
ICBNAJNGBQSYKR-JOGHRLMDSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM249165
Local ready
Direct docking supported
E3L012034
BDB012034
BDBM249166
CN[C@@H](C)C(=O)N[C@@H](Cc1ccc(NCc2ccc(C(=O)NC3C[C@@H](C(=O)NC4CCCc5ccccc54)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C3)cc2)cc1)C(=O)N1Cc2ccccc2CC1C(=O)N[C@@H]1CCCc2ccccc21
C66H82N10O7
1127.445000
ZQGQESOASZCZRS-BRUXDLPLSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM249166
Local ready
Direct docking supported
E3L012035
BDB012035
BDBM249167
CN[C@@H](C)C(=O)NC(Cc1ccc(OCc2ccc(C(=O)N[C@H]3C[C@@H](C(=O)NC4CCCc5ccccc54)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C3)cc2)cc1)C(=O)C1CC=CC[C@H]1C(=O)NC1CCCc2ccccc21
C63H80N8O8
1077.381000
MJRNRPHNOVZJQB-KXXBVNELSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM249167
Local ready
Direct docking supported
E3L012036
BDB012036
BDBM249168
CN[C@@H](C)C(=O)NC(Cc1ccc(OCc2ccc(C(=O)N[C@H]3CC(C(=O)N[C@@H]4CCCc5ccccc54)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C3)cc2)cc1)C(=O)C1CC=CC[C@@H]1C(=O)NC1CCCc2ccccc21
C63H80N8O8
1077.381000
MJRNRPHNOVZJQB-YSMPXDCXSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM249168
Local ready
Direct docking supported
E3L012037
BDB012037
BDBM249169
CN[C@@H](C)C(=O)NC(Cc1ccc(OCc2ccc(C(=O)N[C@H]3CC(C(=O)N[C@@H]4CCCc5ccccc54)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C3)cc2)cc1)C(=O)C1CCCC[C@@H]1C(=O)NC1CCCc2ccccc21
C63H82N8O8
1079.397000
ZGWHKKCFHWPWTG-YSMPXDCXSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM249169
Local ready
Direct docking supported
E3L012038
BDB012038
BDBM249171
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@@H](NC(=O)c2ccc(COc3ccc(CN(NC(=O)[C@H](C)NC)C(=O)C4CCC[C@H]4C(=O)NC4CCCc5ccccc54)cc3)cc2)CC1C(=O)N[C@@H]1CCCc2ccccc21)C(C)(C)C
C61H79N9O8
1066.358000
PCTAIOPAYXJDHB-LJIOIBTLSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM249171
Local ready
Direct docking supported
E3L012039
BDB012039
BDBM249172
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@@H](NC(=O)c2ccc(COc3ccc(CN(NC(=O)[C@H](C)NC)C(=O)C4CCC[C@@H]4C(=O)NC4CCCc5ccccc54)cc3)cc2)CC1C(=O)N[C@@H]1CCCc2ccccc21)C(C)(C)C
C61H79N9O8
1066.358000
PCTAIOPAYXJDHB-CVLHRNLYSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM249172
Local ready
Direct docking supported
E3L012040
BDB012040
BDBM249174
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@@H](NC(=O)c2ccc(COc3ccc(CN(NC(=O)[C@H](C)NC)C(=O)[C@H]4CCCC[C@H]4C(=O)NC4CCCc5ccccc54)cc3)cc2)CC1C(=O)N[C@@H]1CCCc2ccccc21)C(C)(C)C
C62H81N9O8
1080.385000
ZNXRDQOMLFCSOT-FLNWYVDMSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM249174
Local ready
Direct docking supported