E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L012001
BDB012001
BDBM243168
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C(C)=O)cc2)c2ccccc2N(Cc2c(OC)ccc3ccccc23)C1=O
C34H34N4O5
578.669000
FXHJEMSCMLSORJ-KMRXNPHXSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243168; PubChem:CID118077263
Local ready
Direct docking supported
E3L012002
BDB012002
BDBM243169
CC(=O)c1ccc(C(=O)N2C[C@H](NC(=O)[C@H](C)N)C(=O)N(Cc3c(OCC(F)(F)F)ccc4ccccc34)c3ccccc32)cc1
C34H31F3N4O5
632.639000
PCLCZNAVFJDVBZ-DCFHFQCYSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243169; PubChem:CID118076800
Local ready
Direct docking supported
E3L012003
BDB012003
BDBM243170
CC(=O)c1ccc(C(=O)N2C[C@H](NC(=O)[C@H](C)N)C(=O)N(Cc3c(OC(F)F)ccc4ccccc34)c3ccccc32)cc1
C33H30F2N4O5
600.622000
RDBLJXAPGCYLSN-SIBVEZHUSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243170; PubChem:CID118077356
Local ready
Direct docking supported
E3L012004
BDB012004
BDBM243171
COc1ccc2c(CN3C(=O)[C@@H](NC(=O)[C@H](C)N)CN(C(=O)c4ccc(C(C)=O)cc4)c4ccccc43)cc(=O)oc2c1
C32H30N4O7
582.613000
HVVSZNGOPOXPIZ-BVZFJXPGSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243171; PubChem:CID118076759
Local ready
Direct docking supported
E3L012005
BDB012005
BDBM243172
CC(=O)c1ccc(C(=O)N2C[C@H](NC(=O)[C@H](C)N)C(=O)N(Cc3noc4ccccc34)c3ccccc32)cc1
C29H27N5O5
525.565000
BAOXXIQWSSOARZ-SBUREZEXSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243172; PubChem:CID118076682
Local ready
Direct docking supported
E3L012006
BDB012006
BDBM243177
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccno2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C29H28BrN5O5
606.477000
SZQOWYNAFZTCMS-JTSKRJEESA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243177; PubChem:CID118077244
Local ready
Direct docking supported
E3L012007
BDB012007
BDBM243181
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(NC(C)=O)cc2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C34H34BrN5O5
672.580000
LZVAKEDICCBHKT-MMTVBGGISA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243181; PubChem:CID118077111
Local ready
Direct docking supported
E3L012008
BDB012008
BDBM243182
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccn(C)n2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C30H31BrN6O4
619.520000
AEUZTKWFOPUNTM-UUOWRZLLSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243182; PubChem:CID118077064
Local ready
Direct docking supported
E3L012009
BDB012009
BDBM243184
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)Cc2ccccn2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C32H32BrN5O4
630.543000
FFVWHZRSFAVZOH-FNZWTVRRSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243184; PubChem:CID118076562
Local ready
Direct docking supported
E3L012010
BDB012010
BDBM243185
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)Cc2ccc(Cl)nc2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C32H31BrClN5O4
664.988000
HFZIOLXJKCBQDO-DFBJGRDBSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM243185
Local ready
Direct docking supported
E3L012011
BDB012011
BDBM243186
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2cnn(C)c2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C30H31BrN6O4
619.520000
XILMXZIFBUSEOU-UUOWRZLLSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243186; PubChem:CID118077045
Local ready
Direct docking supported
E3L012012
BDB012012
BDBM243188
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2cccc(C#N)c2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C33H30BrN5O4
640.538000
WBUFZQQQUGFIQL-DCFHFQCYSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243188; PubChem:CID118076676
Local ready
Direct docking supported
E3L012013
BDB012013
BDBM243190
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)CCOC)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C29H33BrN4O5
597.510000
OSTWQFDDJBZQBY-MBSDFSHPSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243190; PubChem:CID118076761
Local ready
Direct docking supported
E3L012014
BDB012014
BDBM243191
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccccc2C#N)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C33H30BrN5O4
640.538000
HDONNVBOHIVUBU-DCFHFQCYSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243191; PubChem:CID118077067
Local ready
Direct docking supported
E3L012015
BDB012015
BDBM243194
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C(F)(F)F)cc2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C33H30BrF3N4O4
683.525000
ZKGFDAFPIRQCGA-SIBVEZHUSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243194; PubChem:CID118077119
Local ready
Direct docking supported
E3L012016
BDB012016
BDBM243195
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)Cc2nnn[nH]2)c2ccccc2N(Cc2c(C)ccc3ccccc23)C1=O
C28H30N8O3
526.601000
NIRXVIXPZGSIQY-AVRDEDQJSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243195; PubChem:CID118077183
Local ready
Direct docking supported
E3L012017
BDB012017
BDBM243196
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)CC2CCOCC2)c2ccccc2N(Cc2c(C)ccc3ccccc23)C1=O
C32H38N4O4
542.680000
FKPUSQNNSDNGBB-CUNXSJBXSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243196; PubChem:CID118076528
Local ready
Direct docking supported
E3L012018
BDB012018
BDBM243197
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C#N)cc2)c2ccccc2N(Cc2c(C)ccc3ccccc23)C1=O
C33H31N5O3
545.643000
FWJQHHBSVNLJBA-DWACAAAGSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243197; PubChem:CID118077170
Local ready
Direct docking supported
E3L012019
BDB012019
BDBM243198
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)CC2CCCCC2)c2ccccc2N(Cc2c(C)ccc3ccccc23)C1=O
C33H40N4O3
540.708000
JWZHGQQKGZBONI-FIPFOOKPSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243198; PubChem:CID118077049
Local ready
Direct docking supported
E3L012020
BDB012020
BDBM243199
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(Cl)cc2)c2ccccc2N(Cc2c(C)ccc3ccccc23)C1=O
C32H31ClN4O3
555.078000
YXTJOFXWLBJVQR-IDISGSTGSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM243199; PubChem:CID118077336
Local ready
Direct docking supported