E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L018121
BDB018121
BDBM435436
Cc1cccc2c(=O)[nH]c(C[C@@H](C)CC(=O)N3CCC(C(=O)c4cccc(C(=O)O)c4)CC3)nc12
C27H29N3O5
475.545000
BCSYLIBZTSVMJI-MRXNPFEDSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM435436; PubChem:CID137239844
Local ready
Direct docking supported
E3L018122
BDB018122
BDBM435437
Cc1cccc2c(=O)[nH]c(C[C@H](C)CC(=O)N3CCC(C(=O)c4cccc(C(=O)O)c4)CC3)nc12
C27H29N3O5
475.545000
BCSYLIBZTSVMJI-INIZCTEOSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM435437; PubChem:CID137239797
Local ready
Direct docking supported
E3L018123
BDB018123
BDBM435439
Cc1cc(F)cc2c(=O)[nH]c(C[C@H](C)CC(=O)N3CCC(C(=O)c4cccc(C(=O)O)c4)CC3)nc12
C27H28FN3O5
493.535000
MKFFPXHRRSVHGY-HNNXBMFYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM435439; PubChem:CID137239822
Local ready
Direct docking supported
E3L018124
BDB018124
BDBM435441
Cn1cc(C(=O)C2CCN(C(=O)CC(C)(C)Cc3cc4ccccc4c(=O)[nH]3)CC2)cn1
C25H30N4O3
434.540000
SWIOCYMLKFHIEX-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM435441; PubChem:CID129104029
Local ready
Direct docking supported
E3L018125
BDB018125
BDBM435442
C[C@H](CC(=O)N1CCC(C(=O)c2cnn(C)c2)CC1)Cc1cc2ccccc2c(=O)[nH]1
C24H28N4O3
420.513000
YFRRHPBZXLBANM-INIZCTEOSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM435442; PubChem:CID129103963
Local ready
Direct docking supported
E3L018126
BDB018126
BDBM435443
C[C@@H](CC(=O)N1CCC(C(=O)c2cnn(C)c2)CC1)Cc1cc2ccccc2c(=O)[nH]1
C24H28N4O3
420.513000
YFRRHPBZXLBANM-MRXNPFEDSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM435443; PubChem:CID129104025
Local ready
Direct docking supported
E3L018127
BDB018127
BDBM435444
CC(C)(CC(=O)N1CCC(C(=O)c2ccc(C(=O)O)cc2)CC1)Cc1cc2ccccc2c(=O)[nH]1
C28H30N2O5
474.557000
ZJNATVSUTRSLJP-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM435444; PubChem:CID129103990
Local ready
Direct docking supported
E3L018128
BDB018128
BDBM435445
CC(C)(CC(=O)N1CCC(C(=O)c2cccc(C(=O)O)c2)CC1)Cc1cc2ccccc2c(=O)[nH]1
C28H30N2O5
474.557000
QKUQIWILQMTNRG-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM435445; PubChem:CID129104021
Local ready
Direct docking supported
E3L018129
BDB018129
US10570140, Example 1
C[C@@]1(O)[C@@H](COc2ccc3ccc(N)nc3c2)O[C@@H](n2ccc3c(N)ncnc32)[C@@H]1O
C21H22N6O4
422.445000
LITUSLGKCXVKPY-ZHFAOOELSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM435509; PubChem:CID137479646
Local ready
Direct docking supported
E3L018130
BDB018130
US10570140, Example 2
Nc1ccc2ccc(OC[C@H]3O[C@@H](n4ccc5c(N)ncnc54)[C@H](O)[C@@]3(O)C(F)(F)F)cc2n1
C21H19F3N6O4
476.415000
RPTKDLSRYWBUPV-HIBPSGHXSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM435516; PubChem:CID137479727
Local ready
Direct docking supported
E3L018131
BDB018131
US10570140, Example 3
C#C[C@@]1(O)[C@@H](COc2ccc3ccc(N)nc3c2)O[C@@H](n2ccc3c(N)ncnc32)[C@@H]1O
C22H20N6O4
432.440000
HLGUJTSUABXTJI-XNKSBNDBSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM435518; PubChem:CID137479635
Local ready
Direct docking supported
E3L018132
BDB018132
US10570140, Example 4
C=C[C@@]1(O)[C@@H](COc2ccc3ccc(N)nc3c2)O[C@@H](n2ccc3c(N)ncnc32)[C@@H]1O
C22H22N6O4
434.456000
MWFLCEUDWRURTE-XNKSBNDBSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM435520; PubChem:CID137479699
Local ready
Direct docking supported
E3L018133
BDB018133
US10570140, Example 6
C[C@@]1(O)[C@@H](COc2ccc3ccc(N)nc3c2)O[C@@H](n2cc(F)c3c(N)ncnc32)[C@@H]1O
C21H21FN6O4
440.435000
XNAPHTQOZUJCQT-GYPMPWGGSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM435523; PubChem:CID137479638
Local ready
Direct docking supported
E3L018134
BDB018134
US10570140, Example 10
Cc1ncnc2c1ccn2[C@@H]1O[C@H](COc2ccc3ccc(N)nc3c2)[C@@](C)(O)[C@H]1O
C22H23N5O4
421.457000
ARLUXFUKOHIWIA-HGIWEUDGSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM435524; PubChem:CID137479745
Local ready
Direct docking supported
E3L018135
BDB018135
US10570140, Example 12
C[C@@]1(O)[C@@H](COc2ccc3cc(Br)c(N)nc3c2)O[C@@H](n2ccc3c(N)ncnc32)[C@@H]1O
C21H21BrN6O4
501.341000
JZXUWFPUMKZMTA-VAKZPMALSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM435525; PubChem:CID137479628
Local ready
Direct docking supported
E3L018136
BDB018136
US10570140, Example 17
CSC[C@H]1O[C@@H](n2ccc3c(N)ncnc32)[C@H](O)[C@]1(C)O
C13H18N4O3S
310.379000
LQQSOCLYTRMQNW-OTMMVIPVSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM435526; PubChem:CID137479679
Local ready
Direct docking supported
E3L018137
BDB018137
US10570140, Example 19
COC[C@H]1O[C@@H](n2ccc3c(N)ncnc32)[C@H](O)[C@]1(C)O
C13H18N4O4
294.311000
HRQWBNVMWFKDPT-OTMMVIPVSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM435532; PubChem:CID137479716
Local ready
Direct docking supported
E3L018138
BDB018138
US10570140, Example 20
C[C@@]1(O)[C@@H](COc2ccccc2)O[C@@H](n2ccc3c(N)ncnc32)[C@@H]1O
C18H20N4O4
356.382000
SSTFLTZBHMPENP-LTCOOKNTSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM435533; PubChem:CID137479632
Local ready
Direct docking supported
E3L018139
BDB018139
US10570140, Example 21
C[C@@]1(O)[C@@H](COc2cccc(NC(N)=O)c2)O[C@@H](n2ccc3c(N)ncnc32)[C@@H]1O
C19H22N6O5
414.422000
HZPPOHRKLQAJFF-QOIYZWAUSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM435540; PubChem:CID137479664
Local ready
Direct docking supported
E3L018140
BDB018140
US10570140, Example 22
C[C@@]1(O)[C@@H](COc2cccc(CN)c2)O[C@@H](n2ccc3c(N)ncnc32)[C@@H]1O
C19H23N5O4
385.424000
DDLFJXIBUSNTPF-WTLGNFPFSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM435541; PubChem:CID137479708
Local ready
Direct docking supported