E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L019521
BDB019521
BDBM464572
Cc1cc(C)c(CNC(=O)c2cc(-c3ccc(N4CCN(C)CC4)nc3)cc3c2CCN3S(=O)(=O)C(C)C)c(=O)[nH]1
C30H38N6O4S
578.739000
MRSABGAGWFPBGX-UHFFFAOYSA-N O75530 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM464572; PubChem:CID139543611
Local ready
Direct docking supported
E3L019522
BDB019522
BDBM464573
C=CCC1(S(=O)(=O)n2cc(C)c3c(C(=O)NCc4c(C)cc(C)[nH]c4=O)cc(N4C=CN(CN(C)C)C=C4)cc32)CC1
C31H38N6O4S
590.750000
QVRCUVHEAFEEBI-UHFFFAOYSA-N O75530 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM464573; PubChem:CID177666769
Local ready
Direct docking supported
E3L019523
BDB019523
BDBM464574
C=CCC1(S(=O)(=O)N2CC(C)c3c(C(=O)NCc4c(C)cc(C)[nH]c4=O)cc(-c4ccc(CN(C)C)cc4)cc32)CC1
C33H40N4O4S
588.774000
FCPWJBBWYVFEFM-UHFFFAOYSA-N O75530 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM464574; PubChem:CID139543681
Local ready
Direct docking supported
E3L019524
BDB019524
BDBM464575
C=CCC1(S(=O)(=O)N2CCc3c(C(=O)NCc4c(C)cc(C)[nH]c4=O)cc(-c4ccc(N5CCN(C)CC5)nc4)cc32)CC1
C33H40N6O4S
616.788000
KRIHFEABRBYNSB-UHFFFAOYSA-N O75530 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM464575; PubChem:CID139543683
Local ready
Direct docking supported
E3L019525
BDB019525
BDBM464576
C=CCC1(S(=O)(=O)N2CC(C)c3c(C(=O)NCc4c(C)cc(C)[nH]c4=O)cc(-c4ccc(N5CCN(C)CC5)nc4)cc32)CC1
C34H42N6O4S
630.815000
ZOCJIFRFYZKPCJ-UHFFFAOYSA-N O75530 Histone-lysine N-methyltransferase EZH2
BindingDB
BindingDB:BDBM464576
Local ready
Direct docking supported
E3L019526
BDB019526
BDBM464577
C=CCC1(S(=O)(=O)n2nc(C(F)F)c3c(C(=O)NCc4c(C)cc(C)[nH]c4=O)cc(-c4ccc(N5CCN(C)CC5)nc4)cc32)CC1
C33H37F2N7O4S
665.767000
ZFRSGLDCAQAUJB-UHFFFAOYSA-N O75530 Histone-lysine N-methyltransferase EZH2
BindingDB
BindingDB:BDBM464577
Local ready
Direct docking supported
E3L019527
BDB019527
BDBM464578
C=CCC1(S(=O)(=O)n2nc(C)c3c(C(=O)NCc4c(C)cc(C)[nH]c4=O)cc(-c4ccc(N5CCN(C)CC5)nc4)cc32)CC1
C33H39N7O4S
629.787000
SMZHMYWXZCWMOM-UHFFFAOYSA-N O75530 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM464578; PubChem:CID139543684
Local ready
Direct docking supported
E3L019528
BDB019528
BDBM464579
C=CCCS(=O)(=O)n1nc(C)c2c(C(=O)NCc3c(C)cc(C)[nH]c3=O)cc(-c3ccc(N4CCN(C)CC4)nc3)cc21
C31H37N7O4S
603.749000
KXKHVGAAZDADOY-UHFFFAOYSA-N O75530 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM464579; PubChem:CID177668167
Local ready
Direct docking supported
E3L019529
BDB019529
BDBM464580
C#CCCS(=O)(=O)n1cc(C)c2c(C(=O)NCc3c(OC)cc(C)[nH]c3=O)cc(-c3ccc(N4CCN(C)CC4)nc3)cc21
C32H36N6O5S
616.744000
ISFOOHZGXXVIFR-UHFFFAOYSA-N O75530 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM464580; PubChem:CID139543715
Local ready
Direct docking supported
E3L019530
BDB019530
Parp1-IN-36
NC(=O)c1cccc2c1C(=O)N(C1CCN(C3CCCCC3)CC1)C2
C20H27N3O2
341.455000
QBKPYKWJSWOHNY-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM466534; PubChem:CID73776940
Local ready
Direct docking supported
E3L019531
BDB019531
BDBM466541
NC(=O)c1cccc2c1C(=O)N(CCCN1CCc3ccccc3C1)C2
C21H23N3O2
349.434000
CPZFBGJDYPLHHM-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM466541; PubChem:CID73774808
Local ready
Direct docking supported
E3L019532
BDB019532
BDBM466542
NC(=O)c1cccc2c1C(=O)N(CCCN1CCCc3ccccc31)C2
C21H23N3O2
349.434000
BLEKTFVHUNKMKI-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM466542; PubChem:CID73774809
Local ready
Direct docking supported
E3L019533
BDB019533
BDBM466543
NC(=O)c1cccc2c1C(=O)N(CCCN1CCN(c3ccccc3)CC1)C2
C22H26N4O2
378.476000
QUPVUNKXVXHSQT-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM466543; PubChem:CID73774811
Local ready
Direct docking supported
E3L019534
BDB019534
BDBM466544
NC(=O)c1cc(F)cc2c1C(=O)N(CCCN1CCOCC1)C2
C16H20FN3O3
321.352000
YYMORWAQDHOTFE-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM466544; PubChem:CID73774812
Local ready
Direct docking supported
E3L019535
BDB019535
Itareparib
NC(=O)c1cc(F)cc2c1C(=O)N(C1CCN(C3CCCCC3)CC1)C2
C20H26FN3O2
359.445000
FKYQTFXJWMLOJE-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM466548; PubChem:CID73774960
Local ready
Direct docking supported
E3L019536
BDB019536
US10807959, Example 2
O=C(NC(C1CC1)C1CC1)c1cc(CNC2=NCCN2)cc(-c2ccc(F)cc2Cl)c1
C24H26ClFN4O
440.950000
IAJHBHHTWPWBQR-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM468656; PubChem:CID146370880
Local ready
Direct docking supported
E3L019537
BDB019537
US10807959, Example 3
COc1cc(CNC(=O)c2cc(CNC3=NCCN3)cc(-c3ccc(F)cc3Cl)c2)cc(OC)c1
C26H26ClFN4O3
496.970000
NCDDOTFEQCIEET-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM468657; PubChem:CID146370897
Local ready
Direct docking supported
E3L019538
BDB019538
US10807959, Example 110
O=C(NCc1cc(Cl)cc(Cl)c1)c1cc(Cl)cc(Cn2ccnc2)c1
C18H14Cl3N3O
394.689000
FQDHIPIENIYXFJ-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM468698; PubChem:CID146370876
Local ready
Direct docking supported
E3L019539
BDB019539
US10807959, Example 111
COc1cc(CNC(=O)c2cc(Cl)cc(Cn3ccnc3)c2)cc(OC)c1
C20H20ClN3O3
385.851000
UMMZDUDQWHLSAQ-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM468699; PubChem:CID146370871
Local ready
Direct docking supported
E3L019540
BDB019540
US10807959, Example 112
Cc1ccc(CNC(=O)c2cc(Cl)cc(Cn3ccnc3)c2)cc1Cl
C19H17Cl2N3O
374.271000
GEMSEPIHRWFUHO-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM468700; PubChem:CID146370793
Local ready
Direct docking supported