E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L022481
BDB022481
BDBM525575
CN1CCN(c2ccc(-c3cc(CN4CCOCC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C29H31F4N5O3
573.591000
HJPMPWYSTRBBLP-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525575; PubChem:CID138558096
Local ready
Direct docking supported
E3L022482
BDB022482
BDBM525577
CN1CCN(c2ccc(-c3cccc(CN4CCC(F)CC4)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C30H33F4N5O2
571.619000
KKEXEXDHWKMRQV-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525577; PubChem:CID138578236
Local ready
Direct docking supported
E3L022483
BDB022483
BDBM525578
CN1CCN(c2ccc(-c3cc(CN4CCC(F)CC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C30H32F5N5O2
589.609000
LCHGERIHAPDZCU-UHFFFAOYSA-N P61964, Q03164, Q15291 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM525578; PubChem:CID137376640
Local ready
Direct docking supported
E3L022484
BDB022484
BDBM525579
CN1CCN(c2ccc(-c3cc(CN4CCOCC4)ccc3Cl)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C29H31ClF3N5O3
590.046000
FOAUMOZOTVHACR-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525579; PubChem:CID138558070
Local ready
Direct docking supported
E3L022485
BDB022485
BDBM525581
CN1CCN(c2ccc(-c3cc(C(=O)NC4CCCCC4)ccc3Cl)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C31H33ClF3N5O3
616.084000
QYUSSNJDVILCJQ-UHFFFAOYSA-N P61964, Q03164, Q15291 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM525581; PubChem:CID138558094
Local ready
Direct docking supported
E3L022486
BDB022486
BDBM525582
CN1CCN(c2ccc(-c3cc(C(=O)NC4CCCCC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C31H33F4N5O3
599.629000
GLHJOTVYVUCLQO-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525582; PubChem:CID137376500
Local ready
Direct docking supported
E3L022487
BDB022487
BDBM525583
C[C@@H]1CN(Cc2ccc(F)c(-c3ccc(N4CCN(C)CC4)c(NC(=O)c4c[nH]c(=O)cc4C(F)(F)F)c3)c2)C[C@H](C)O1
C31H35F4N5O3
601.645000
UWDXJOIFTJGVGJ-BGYRXZFFSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525583; PubChem:CID138558048
Local ready
Direct docking supported
E3L022488
BDB022488
BDBM525585
COCOc1cc(F)c(-c2ccc(N3CCN(C)CC3)c(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c2)cc1C(=O)NC(C)(C)CC(C)(C)C
C35H43F4N5O5
689.751000
YOZWQAYOZCWKIG-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB
BindingDB:BDBM525585
Local ready
Direct docking supported
E3L022489
BDB022489
BDBM525586
CN1CCN(c2ccc(-c3cc(C(N)=O)c(O)cc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C25H23F4N5O4
533.482000
CVIREEPRCSCSPK-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525586; PubChem:CID138558078
Local ready
Direct docking supported
E3L022490
BDB022490
BDBM525587
CN1CCN(c2ccc(-c3cc(OC(F)(F)F)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C25H21F7N4O3
558.454000
YKVYRIFLGNVFKL-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525587; PubChem:CID137376422
Local ready
Direct docking supported
E3L022491
BDB022491
BDBM525588
CC(C)COc1ccc(F)c(-c2ccc(N3CCN(C)CC3)c(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c2)c1
C28H30F4N4O3
546.565000
ZXGPMNRFVXJEBT-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525588; PubChem:CID137376442
Local ready
Direct docking supported
E3L022492
BDB022492
BDBM525589
CN1CCN(c2ccc(-c3cc(CNC4CCCCC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C31H35F4N5O2
585.646000
SYLSWCJVGKVJRP-UHFFFAOYSA-N P61964, Q03164, Q15291 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM525589; PubChem:CID138558084
Local ready
Direct docking supported
E3L022493
BDB022493
BDBM525590
CN1CCN(c2ccc(-c3ccc(OC4CCOCC4)nc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C28H29F4N5O4
575.563000
BKPFEHCOJLAUMD-UHFFFAOYSA-N P61964, Q03164, Q15291 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM525590; PubChem:CID138558069
Local ready
Direct docking supported
E3L022494
BDB022494
BDBM525591
CN1CCN(c2ccc(-c3cc(CN4CCOCC4)ccc3F)cc2NC(=O)c2ccc(=O)[nH]n2)CC1
C27H31FN6O3
506.582000
XSDWUEUWCFEPKR-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525591; PubChem:CID138558060
Local ready
Direct docking supported
E3L022495
BDB022495
US11174250, Example 10
COc1cccc(C(=O)Nc2cc(-c3cc(CN4CCOCC4)ccc3F)ccc2N2CCN(C)CC2)c1
C30H35FN4O3
518.633000
YISLEUASYBXZOU-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525592; PubChem:CID138558056
Local ready
Direct docking supported
E3L022496
BDB022496
US11174250, Example 11
Cc1cc(C(=O)Nc2cc(-c3cc(CN4CCOCC4)ccc3F)ccc2N2CCN(C)CC2)cc(C)c1F
C31H36F2N4O2
534.651000
CRJVRDBFAYGWJT-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525593; PubChem:CID137376385
Local ready
Direct docking supported
E3L022497
BDB022497
US11174250, Example 12
Cc1c(F)ccc(C(=O)Nc2cc(-c3cc(CN4CCOCC4)ccc3F)ccc2N2CCN(C)CC2)c1Cl
C30H33ClF2N4O2
555.069000
GNGFABMWVXAILW-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525594; PubChem:CID137376624
Local ready
Direct docking supported
E3L022498
BDB022498
US11174250, Example 13
CN1CCN(c2ccc(-c3cc(CN4CCOCC4)ccc3F)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)CC1
C30H33F4N5O3
587.618000
KYEHLKFNXJSZRC-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525595; PubChem:CID137376569
Local ready
Direct docking supported
E3L022499
BDB022499
BDBM525596
COC(=O)c1ccc(F)c(-c2ccc(N3CCN(C)CC3)c(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c2)c1
C26H24F4N4O4
532.494000
NCLMJGKDCMDFOZ-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525596; PubChem:CID138558085
Local ready
Direct docking supported
E3L022500
BDB022500
BDBM525597
CN1CCN(c2ccc(-c3cc(OCC4CC4)ncc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C27H27F4N5O3
545.537000
MCGJZXZCEBZTRU-UHFFFAOYSA-N P61964, Q03164, Q15291 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM525597; PubChem:CID138558054
Local ready
Direct docking supported