E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L022541
BDB022541
US11174250, Example 57
COc1cc(C(F)(F)F)c(C(=O)Nc2cc(-c3cc(CN4CCC(S(C)(=O)=O)C4)ccc3F)ccc2N2CCN(C)CC2)cn1
C31H35F4N5O4S
649.711000
RZQVYLYINRBCQA-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525639; PubChem:CID138558101
Local ready
Direct docking supported
E3L022542
BDB022542
US11174250, Example 58
COc1cc(C(F)(F)F)c(C(=O)Nc2cc(-c3cc(CN(C)[C@H]4CCOC4)ccc3F)ccc2N2CCN(C)CC2)cn1
C31H35F4N5O3
601.645000
QHDOOYLHJSZHCX-QFIPXVFZSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525640; PubChem:CID137376440
Local ready
Direct docking supported
E3L022543
BDB022543
US11174250, Example 59
COc1cc(C(F)(F)F)c(C(=O)Nc2cc(-c3cc(CN4CCOC(C)(C)C4)ccc3F)ccc2N2CCN(C)CC2)cn1
C32H37F4N5O3
615.672000
BJMLVUKERJEGKD-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525641; PubChem:CID137376366
Local ready
Direct docking supported
E3L022544
BDB022544
BDBM525642
C[C@@H]1CN(c2ccc(-c3cc(CN4CCOCC4)cnc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H34F4N6O3
602.633000
SQPSBDQTEBAIRJ-KDURUIRLSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525642; PubChem:CID137376597
Local ready
Direct docking supported
E3L022545
BDB022545
BDBM525643
CN1CCN(c2ccc(-c3cc(CN4CCOCC4)cnc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C28H30F4N6O3
574.579000
FZVHYHVJNVOCCK-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525643; PubChem:CID138558090
Local ready
Direct docking supported
E3L022546
BDB022546
BDBM525644
CCN1CCN(c2ccc(-c3cc(CN4CCOCC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C30H33F4N5O3
587.618000
BEWURZMFMJZRIA-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525644; PubChem:CID138558087
Local ready
Direct docking supported
E3L022547
BDB022547
BDBM525645
CCN1CCN(c2ccc(-c3cc(CNC4CCCCC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C32H37F4N5O2
599.673000
CGMHUMFZWIFNAO-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525645; PubChem:CID137376589
Local ready
Direct docking supported
E3L022548
BDB022548
US11174250, Example 64
CN1CCN(c2ccc(-c3cc(CN4CCOCC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1COC(=O)C(C)(C)C
C35H41F4N5O5
687.735000
CTHNPKBDPXKWJP-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525646; PubChem:CID138558072
Local ready
Direct docking supported
E3L022549
BDB022549
BDBM525647
CN1CCN(c2ccc(-c3cc(CN4CCOCC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1CO
C30H33F4N5O4
603.617000
DGQPJSOBUCRUMC-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525647; PubChem:CID137376615
Local ready
Direct docking supported
E3L022550
BDB022550
BDBM525648
CN1CCN(c2ccc(-c3cc(CN4CCN(CC5CC5)CC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C33H38F4N6O2
626.699000
UCIMUGNNMDZMDT-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525648; PubChem:CID137376339
Local ready
Direct docking supported
E3L022551
BDB022551
BDBM525649
CN1CCN(c2ccc(-c3cc(CN(C)C4CCCCC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C32H37F4N5O2
599.673000
KZGBALJQZBEHNW-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525649; PubChem:CID137376725
Local ready
Direct docking supported
E3L022552
BDB022552
BDBM525650
CN1CCN(c2ccc(-c3cc(CN4CCN(Cc5ccc(F)cc5)CC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C36H37F5N6O2
680.722000
MSVYPKVNSDNBMD-UHFFFAOYSA-N P61964, Q03164, Q15291 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM525650; PubChem:CID137376585
Local ready
Direct docking supported
E3L022553
BDB022553
BDBM525651
CN1CCN(c2ccc(-c3cc(CN4CC[C@@H](O)C4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C29H31F4N5O3
573.591000
AKWXPKBHROSRKY-HXUWFJFHSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525651; PubChem:CID138558073
Local ready
Direct docking supported
E3L022554
BDB022554
BDBM525652
CN1CCN(c2ccc(-c3cc(CN4CCC(N5CCOCC5)CC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C34H40F4N6O3
656.725000
ZXQPWVCTBWBJLE-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525652; PubChem:CID137376454
Local ready
Direct docking supported
E3L022555
BDB022555
BDBM525653
CN1CCN(c2ccc(-c3cc(CN4CC[C@@H](N(C)C)C4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C31H36F4N6O2
600.661000
CBOLJLFNJWKKIR-JOCHJYFZSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525653; PubChem:CID138558046
Local ready
Direct docking supported
E3L022556
BDB022556
BDBM525654
CN1CCN(c2ccc(-c3cc(CN4CCNCC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C29H32F4N6O2
572.607000
RDIJFNQKWLWKCS-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525654; PubChem:CID137376367
Local ready
Direct docking supported
E3L022557
BDB022557
BDBM525656
CN1CCN(c2ccc(-c3cc(CN4C5COCC4C5)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C30H31F4N5O3
585.602000
KYOLZFSJTRIOGN-UHFFFAOYSA-N P61964, Q03164, Q15291 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM525656; PubChem:CID138558062
Local ready
Direct docking supported
E3L022558
BDB022558
BDBM525657
CN1CCN(c2ccc(-c3cc(CN4CC[C@@H](S(C)(=O)=O)C4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C30H33F4N5O4S
635.684000
FJOQIHHLLIDBIS-OAQYLSRUSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525657; PubChem:CID137376403
Local ready
Direct docking supported
E3L022559
BDB022559
BDBM525658
CN1CCN(c2ccc(-c3cc(CN(C)[C@H]4CCOC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C30H33F4N5O3
587.618000
QJGKTYAONCYKFZ-NRFANRHFSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525658; PubChem:CID138558091
Local ready
Direct docking supported
E3L022560
BDB022560
BDBM525659
CN1CCN(c2ccc(-c3cc(CN4CCOC(C)(C)C4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C31H35F4N5O3
601.645000
XXBPCORNASWFLI-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525659; PubChem:CID137376393
Local ready
Direct docking supported