E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L022501
BDB022501
BDBM525598
CN1CCN(c2ccc(-c3ccc(OCC4CC4)nc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C27H27F4N5O3
545.537000
LRFLJHLBEGFWNW-UHFFFAOYSA-N P61964, Q03164, Q15291 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM525598; PubChem:CID138558051
Local ready
Direct docking supported
E3L022502
BDB022502
BDBM525599
CN1CCN(c2ccc(-c3cc(CNC4CC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C28H29F4N5O2
543.565000
HOCSMKQNXKCYNP-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525599; PubChem:CID138558110
Local ready
Direct docking supported
E3L022503
BDB022503
US11174250, Example 18
Cc1cc(C(=O)Nc2cc(-c3cc(CNC4CCCCC4)ccc3F)ccc2N2CCN(C)CC2)cc(C)c1F
C33H40F2N4O
546.706000
VMFLEEZZDJFXSN-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525600; PubChem:CID137376297
Local ready
Direct docking supported
E3L022504
BDB022504
US11174250, Example 19
Cc1cc(C(=O)Nc2cc(-c3ccc(OC4CCOCC4)nc3F)ccc2N2CCN(C)CC2)cc(C)c1F
C30H34F2N4O3
536.623000
SELRACPBIBUEEF-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525601; PubChem:CID137376265
Local ready
Direct docking supported
E3L022505
BDB022505
US11174250, Example 20
CCOc1cc(C(F)(F)F)c(C(=O)Nc2cc(-c3cc(CN4CCOCC4)ccc3F)ccc2N2CCN(C)CC2)nn1
C30H34F4N6O3
602.633000
JRYDJOKWCMXIJP-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525602; PubChem:CID137376333
Local ready
Direct docking supported
E3L022506
BDB022506
BDBM525603
CN1CCN(c2ccc(-c3cc(OCC4CC4)c(F)cc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C28H27F5N4O3
562.539000
VXJQBCFPOAUKDT-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525603; PubChem:CID137376430
Local ready
Direct docking supported
E3L022507
BDB022507
BDBM525604
CN1CCN(c2ccc(-c3ccc(N4CCCC4)nc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C27H28F4N6O2
544.553000
BNEXOFUXQOASJO-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525604; PubChem:CID138558052
Local ready
Direct docking supported
E3L022508
BDB022508
BDBM525605
CN1CCN(c2ccc(-c3cccc(CN4CCOCC4)c3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C29H31F4N5O3
573.591000
GZJGZRQNIYCCKJ-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525605; PubChem:CID137376647
Local ready
Direct docking supported
E3L022509
BDB022509
US11174250, Example 24
Cc1cccc(C(=O)Nc2cc(-c3cc(CN4CCOCC4)ccc3F)ccc2N2CCN(C)CC2)c1
C30H35FN4O2
502.634000
XZDAYUHSZSKJGF-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525606; PubChem:CID138558045
Local ready
Direct docking supported
E3L022510
BDB022510
BDBM525607
CN1CCN(c2ccc(-c3ccccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C24H22F4N4O2
474.458000
BZGTYEKCVKLBKA-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525607; PubChem:CID138558082
Local ready
Direct docking supported
E3L022511
BDB022511
BDBM525608
CC1CN(c2ccc(-c3cc(CN4CCOCC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CCN1C
C30H33F4N5O3
587.618000
DXVHKVAAZWOGEQ-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525608; PubChem:CID138558127
Local ready
Direct docking supported
E3L022512
BDB022512
BDBM525609
C[C@@H]1CN(c2ccc(-c3cc(CN4CCOCC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H35F4N5O3
601.645000
XOODMKHLHHLZMP-BGYRXZFFSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525609; PubChem:CID138558050
Local ready
Direct docking supported
E3L022513
BDB022513
BDBM525610
C[C@H]1CN(C)CCN1c1ccc(-c2cc(CN3CCOCC3)ccc2F)cc1NC(=O)c1c[nH]c(=O)cc1C(F)(F)F
C30H33F4N5O3
587.618000
VRIPOKILOHMLOS-IBGZPJMESA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525610; PubChem:CID138558067
Local ready
Direct docking supported
E3L022514
BDB022514
BDBM525611
Cc1cc(=O)[nH]cc1C(=O)Nc1cc(-c2cc(CN3CCOCC3)ccc2F)ccc1N1CCN(C)CC1
C29H34FN5O3
519.621000
VWJOEOAQIKTGBE-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525611; PubChem:CID137376448
Local ready
Direct docking supported
E3L022515
BDB022515
BDBM525612
CN1CCN(c2cc(F)c(-c3cc(CN4CCOCC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C29H30F5N5O3
591.581000
JYVWWLIWJLNTAD-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525612; PubChem:CID138541729
Local ready
Direct docking supported
E3L022516
BDB022516
BDBM525613
CN1CCN(c2ccc(-c3cc(OC4CCOCC4)ncc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C28H29F4N5O4
575.563000
ACXYOZFCRYNCTJ-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525613; PubChem:CID138558065
Local ready
Direct docking supported
E3L022517
BDB022517
BDBM525615
CN1CCN(c2ccc(-c3ccc(CNC4CCCC4)cc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C30H33F4N5O2
571.619000
HEBOREHIASXCQK-UHFFFAOYSA-N P61964, Q03164, Q15291 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM525615; PubChem:CID138558081
Local ready
Direct docking supported
E3L022518
BDB022518
BDBM525616
CN1CCN(c2ccc(-c3ccc(CNC4CCCCC4)cc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C31H35F4N5O2
585.646000
BWGYDAIKRMRFTQ-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525616; PubChem:CID138558098
Local ready
Direct docking supported
E3L022519
BDB022519
BDBM525617
CN1CCN(c2ccc(-c3cc(CNC(C)(C)C)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C29H33F4N5O2
559.608000
KFTPIHQLXRHCSW-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525617; PubChem:CID137376728
Local ready
Direct docking supported
E3L022520
BDB022520
US11174250, Example 36
Cc1cc(C(=O)Nc2cc(-c3cc(CN4CCOCC4)ccc3F)ccc2N2CCN(C)CC2)ccc1F
C30H34F2N4O2
520.624000
KQIMORZBKVLGNE-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525618; PubChem:CID137376652
Local ready
Direct docking supported