E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L022521
BDB022521
BDBM525619
CN1CCN(c2ccc(-c3cc(CNC4CCOCC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C30H33F4N5O3
587.618000
AVUKHGKRUAUGJG-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525619; PubChem:CID137376620
Local ready
Direct docking supported
E3L022522
BDB022522
BDBM525620
CN1CCN(c2ccc(-c3ccc(CN4CCOCC4)cc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C29H31F4N5O3
573.591000
RZMHVRYMGMZVQU-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525620; PubChem:CID138558089
Local ready
Direct docking supported
E3L022523
BDB022523
BDBM525621
CN1CCN(c2ccc(-c3ccnc(N4CCOCC4)c3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C27H28F4N6O3
560.552000
LPAXCQJMGILCNC-UHFFFAOYSA-N P61964, Q03164, Q15291 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM525621; PubChem:CID138558042
Local ready
Direct docking supported
E3L022524
BDB022524
BDBM525622
CN(C)Cc1ccc(F)c(-c2ccc(N3CCN(C)CC3)c(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c2)c1
C27H29F4N5O2
531.554000
GXQQAULZONMYCT-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525622; PubChem:CID137376608
Local ready
Direct docking supported
E3L022525
BDB022525
US11174250, Example 41
Cc1cc(C(=O)Nc2cc(-c3cc(CN4CCOCC4)ccc3F)ccc2N2CCN(C)CC2)cc(C(F)(F)F)c1F
C31H33F5N4O2
588.621000
BOVKVTDVQGJRCJ-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525623; PubChem:CID137376698
Local ready
Direct docking supported
E3L022526
BDB022526
US11174250, Example 42
CN1CCN(c2ccc(-c3cc(CNC4CCC(F)(F)CC4)ccc3F)cc2NC(=O)c2cnc(OCC[Si](C)(C)C)cc2C(F)(F)F)CC1
C36H45F6N5O2Si
721.863000
HGPCPTVSTUVIQI-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525624; PubChem:CID141655775
Local ready
Direct docking supported
E3L022527
BDB022527
BDBM525625
CN1CCN(c2ccc(-c3cc(CN(C)C4COC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C29H31F4N5O3
573.591000
RZGVKGLIYMLVJM-UHFFFAOYSA-N P61964, Q03164, Q15291 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM525625; PubChem:CID137376510
Local ready
Direct docking supported
E3L022528
BDB022528
US11174250, Example 44
CN1CCN(c2ccc(-c3cc(CN4CCOCC4)ccc3F)cc2NC(=O)c2ccc(O)cc2C(F)(F)F)CC1
C30H32F4N4O3
572.603000
GDXSDWNVMRVNLW-UHFFFAOYSA-N P61964, Q03164, Q15291 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM525626; PubChem:CID137376359
Local ready
Direct docking supported
E3L022529
BDB022529
BDBM525627
C[C@@H]1CN(c2ccc(-c3cc(CNC4CCCCC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C33H39F4N5O2
613.700000
FWQWFEHDDXOZTR-OYRHEFFESA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525627; PubChem:CID137376529
Local ready
Direct docking supported
E3L022530
BDB022530
BDBM525628
C[C@@H]1CN(c2ccc(-c3cc(C(=O)NC4CCCCC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C33H37F4N5O3
627.683000
YFITWOOGOWMDIU-BGYRXZFFSA-N P61964, Q03164, Q15291 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM525628; PubChem:CID138558063
Local ready
Direct docking supported
E3L022531
BDB022531
BDBM525629
C[C@@H]1CN(c2ccc(-c3cc(C(=O)N4CCOCC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H33F4N5O4
615.628000
PXYKAAPFUGJXIV-KDURUIRLSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525629; PubChem:CID138558121
Local ready
Direct docking supported
E3L022532
BDB022532
US11174250, Example 48
CN1CCN(c2ccc(-c3cc(CN4CCOCC4)ccc3F)cc2NC(=O)c2cc(O)cc(F)c2F)CC1
C29H31F3N4O3
540.586000
LDZZELJKEFFULJ-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525630; PubChem:CID137376704
Local ready
Direct docking supported
E3L022533
BDB022533
BDBM525631
CN1CCN(c2ccc(-c3cc(CN4CCOCC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)CC1
C29H32F3N5O3
555.601000
SNSKIDONUPQTCE-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525631; PubChem:CID137376542
Local ready
Direct docking supported
E3L022534
BDB022534
BDBM525632
C[C@@H]1CN(c2ccc(-c3cc(OCC4CC4)ncc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H31F4N5O3
573.591000
GTMHTXCHHZKEHH-CALCHBBNSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525632; PubChem:CID137376487
Local ready
Direct docking supported
E3L022535
BDB022535
US11174250, Example 51
COc1cc(C(F)(F)F)c(C(=O)Nc2cc(-c3cc(C=O)ccc3F)ccc2N2CCN(C)CC2)cn1
C26H24F4N4O3
516.495000
JGDUXPQQVSSJAG-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525633; PubChem:CID137376356
Local ready
Direct docking supported
E3L022536
BDB022536
US11174250, Example 52
COc1cc(C(F)(F)F)c(C(=O)Nc2cc(-c3cc(CN4CCC(N5CCOCC5)CC4)ccc3F)ccc2N2CCN(C)CC2)cn1
C35H42F4N6O3
670.752000
LSYNGTFUYRULPD-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525634; PubChem:CID137376354
Local ready
Direct docking supported
E3L022537
BDB022537
US11174250, Example 53
COc1cc(C(F)(F)F)c(C(=O)Nc2cc(-c3cc(CN4CC[C@@H](C(C)C)C4)ccc3F)ccc2N2CCN(C)CC2)cn1
C33H39F4N5O2
613.700000
OMVDNRLZCSQGNL-XMMPIXPASA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525635; PubChem:CID137376301
Local ready
Direct docking supported
E3L022538
BDB022538
US11174250, Example 54
COc1cc(C(F)(F)F)c(C(=O)Nc2cc(-c3cc(CN4CCN(C(C)=O)CC4)ccc3F)ccc2N2CCN(C)CC2)cn1
C32H36F4N6O3
628.671000
MLAYYWSYGKSRBO-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525636; PubChem:CID137376288
Local ready
Direct docking supported
E3L022539
BDB022539
US11174250, Example 55
COc1cc(C(F)(F)F)c(C(=O)Nc2cc(-c3cc(CN4CCC(F)CC4)ccc3F)ccc2N2CCN(C)CC2)cn1
C31H34F5N5O2
603.636000
OZSFVNHGPLWHND-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525637; PubChem:CID137376289
Local ready
Direct docking supported
E3L022540
BDB022540
US11174250, Example 56
COc1cc(C(F)(F)F)c(C(=O)Nc2cc(-c3cc(CN4C5COCC4C5)ccc3F)ccc2N2CCN(C)CC2)cn1
C31H33F4N5O3
599.629000
KWJLATYORDQAOJ-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525638; PubChem:CID137376318
Local ready
Direct docking supported