E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L025961
BDB025961
BDBM553299
CCOC(=O)N1CCC=C(c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)C1
C28H33F4N5O4
579.595000
VCYOGOOQNFWVNH-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553299
Local ready
Direct docking supported
E3L025962
BDB025962
BDBM553300
C[C@@H]1CN(c2cc(F)c(C3=CCCN(C(=O)N4CCCC4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H36F4N6O3
604.649000
SBXCTFWQIQARLZ-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553300
Local ready
Direct docking supported
E3L025963
BDB025963
BDBM553301
COc1cnc(N2CCC=C(c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)C2)nc1
C30H33F4N7O3
615.632000
TYOXBBIONIWVRD-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553301
Local ready
Direct docking supported
E3L025964
BDB025964
BDBM553302
Cc1cnc(N2CCC=C(c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)C2)nc1
C30H33F4N7O2
599.633000
HODWKDDKYRWGCE-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553302
Local ready
Direct docking supported
E3L025965
BDB025965
BDBM553303
C[C@@H]1CN(c2cc(F)c(C3=CCCN(c4ncc(F)cn4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H30F5N7O2
603.596000
GYNGZAVRQSHHMV-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553303
Local ready
Direct docking supported
E3L025966
BDB025966
BDBM553304
C[C@@H]1CN(c2cc(F)c(-c3ccnc(N4CCOCC4)n3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C28H31F4N7O3
589.594000
LYWPEOXTCSHIPI-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553304; PubChem:CID138541702
Local ready
Direct docking supported
E3L025967
BDB025967
US11319299, Example 379
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCN(C)CC4)nc3)cc2NC(=O)c2ccc(F)cc2C(F)(F)F)C[C@H](C)N1C
C30H34F5N7O
603.640000
GWAUIRJYZIWNHS-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553305; PubChem:CID138541789
Local ready
Direct docking supported
E3L025968
BDB025968
US11319299, Example 380
C[C@@H]1CN(c2cc(F)c(-c3cnc(N(C)C)nc3)cc2NC(=O)c2ccc(F)cc2C(F)(F)F)C[C@H](C)N1C
C27H29F5N6O
548.560000
MAKIKSDYKJDQRG-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553306; PubChem:CID138541622
Local ready
Direct docking supported
E3L025969
BDB025969
US11319299, Example 381
C[C@@H]1CN(c2ncc(-c3cc(NC(=O)c4ccc(F)cc4C(F)(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)cn2)C[C@H](C)N1C
C32H38F5N7O
631.694000
DYHKUOKFQBAXGE-FXELSEDVSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553307; PubChem:CID137376815
Local ready
Direct docking supported
E3L025970
BDB025970
US11319299, Example 382
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCN(C)CC4)nc3)cc2NC(=O)c2ccc(F)cc2C(F)(F)F)C[C@H](C)N1C
C30H34F5N7O
603.640000
GWAUIRJYZIWNHS-OALUTQOASA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553308; PubChem:CID138551519
Local ready
Direct docking supported
E3L025971
BDB025971
US11319299, Example 383
C[C@@H]1CN(c2ncc(-c3cc(NC(=O)c4cn(C)c(=O)cc4C(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)C[C@H](C)O1
C30H36F3N7O3
599.658000
KDCDWHIXQCFBPT-GBESFXJTSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553309; PubChem:CID138551362
Local ready
Direct docking supported
E3L025972
BDB025972
BDBM553310
C[C@@H]1CN(c2cc(F)c(-c3ccc(N4CCOCC4)nn3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C28H31F4N7O3
589.594000
FOPFVTYEWGWWBL-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553310; PubChem:CID137377561
Local ready
Direct docking supported
E3L025973
BDB025973
BDBM553311
C[C@@H]1CN(c2ncc(-c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)cn2)C[C@H](C)O1
C30H36F3N7O3
599.658000
BVHKQYPLCDYGGF-QGFMHUBQSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553311
Local ready
Direct docking supported
E3L025974
BDB025974
BDBM553312
C[C@@H]1CN(c2ncc(-c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)cn2)CCO1
C29H34F3N7O3
585.631000
SQLWFXGIXXFUTA-FGTMMUONSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553312
Local ready
Direct docking supported
E3L025975
BDB025975
US11319299, Example 387
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2ccc(F)cc2C(F)(F)F)C[C@H](C)N1C
C29H31F5N6O2
590.597000
OVAUTHLIMOXPHS-ROUUACIJSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553313; PubChem:CID138551461
Local ready
Direct docking supported
E3L025976
BDB025976
BDBM553314
C[C@@H]1CN(c2ncc(-c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)cn2)CCO1
C29H33F4N7O3
603.621000
KVUORGVHWOGQBN-FGTMMUONSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553314
Local ready
Direct docking supported
E3L025977
BDB025977
BDBM553315
C[C@H]1CN(c2ncc(-c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)CCO1
C28H31F4N7O3
589.594000
OQWOOPXTVAUFKG-IRXDYDNUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553315; PubChem:CID138551619
Local ready
Direct docking supported
E3L025978
BDB025978
BDBM553316
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCO[C@@H](C)C4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H33F4N7O3
603.621000
KVUORGVHWOGQBN-KSZLIROESA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553316
Local ready
Direct docking supported
E3L025979
BDB025979
US11319299, Example 391
C[C@@H]1CN(c2cc(F)c(C3=CCCN(c4ncccn4)C3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H33F4N7O2
599.633000
SUYCZVBKROVXCE-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553317; PubChem:CID138541654
Local ready
Direct docking supported
E3L025980
BDB025980
BDBM553318
C[C@@H]1CN(c2cc(F)c(N3CCN(Cc4ccc(F)cc4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H35F5N6O2
618.651000
SYPUHSSEPFAVPU-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553318; PubChem:CID137377140
Local ready
Direct docking supported