E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L026001
BDB026001
BDBM553339
C[C@@H]1CN(c2cc(F)c(C3=CCCN(c4ncc(CO)cn4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H33F4N7O3
615.632000
BEXDKQCDSQKQQE-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553339
Local ready
Direct docking supported
E3L026002
BDB026002
BDBM553340
C[C@@H]1CN(c2cc(F)c(C3=CCCN(c4ncc(CN(C)C)cn4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C32H38F4N8O2
642.702000
KCPQKZLOJNGOBV-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553340
Local ready
Direct docking supported
E3L026003
BDB026003
BDBM553341
C[C@@H]1CN(c2cc(F)c(C3=CCCN(c4ncc(CN5CCOCC5)cn4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C34H40F4N8O3
684.739000
CVSYIAGQTXDESY-SZPZYZBQSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553341
Local ready
Direct docking supported
E3L026004
BDB026004
BDBM553342
C[C@@H]1CN(c2cc(F)c(C3=CCCN(c4ncc(CN5CCN(C)CC5)cn4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C35H43F4N9O2
697.782000
GVYWUGHYQBWXTQ-ZRZAMGCNSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553342
Local ready
Direct docking supported
E3L026005
BDB026005
BDBM553343
C[C@@H]1CN(c2ncc(-c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)(F)F)c(N4CC[C@@H](N(C)C)C4)cc3F)cn2)C[C@H](C)O1
C29H33F4N7O3
603.621000
DRWIQLVJUOUXHZ-ZIFCJYIRSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553343
Local ready
Direct docking supported
E3L026006
BDB026006
BDBM553344
CCN(C)[C@@H]1CCN(c2cc(F)c(-c3cnc(N4C[C@@H](C)O[C@@H](C)C4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C1
C30H35F4N7O3
617.648000
RCFWLWDIJBXJBT-WSTZPKSXSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553344
Local ready
Direct docking supported
E3L026007
BDB026007
BDBM553345
CCN(CC)[C@@H]1CCN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C1
C29H33F4N7O3
603.621000
NCUGYJQYSGWIAP-LJQANCHMSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553345; PubChem:CID137377277
Local ready
Direct docking supported
E3L026008
BDB026008
BDBM553346
CC(C)N(C)[C@@H]1CCN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C1
C29H33F4N7O3
603.621000
YSTFBSNVCIVOFV-LJQANCHMSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553346; PubChem:CID137376948
Local ready
Direct docking supported
E3L026009
BDB026009
US11319299, Example 421
C[C@@H]1CN(c2ccc(-c3cc(NC(=O)c4cn(C)c(=O)cc4C(F)(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)C[C@H](C)O1
C31H36F4N6O3
616.660000
FPUHELKSPQHCAR-SLFFLAALSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553347; PubChem:CID138551463
Local ready
Direct docking supported
E3L026010
BDB026010
US11319299, Example 422
C[C@@H]1CN(c2ccc(-c3cc(NC(=O)c4cn(C)c(=O)cc4C(F)(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)cn2)C[C@H](C)O1
C32H38F4N6O3
630.687000
UNHOCOGRITXWKY-FXELSEDVSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553348; PubChem:CID137377626
Local ready
Direct docking supported
E3L026011
BDB026011
US11319299, Example 423
C[C@@H]1CN(c2ccc(-c3cc(NC(=O)c4ccc(F)cc4C(F)(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)C[C@H](C)O1
C31H34F5N5O2
603.636000
UFGCOUPQDHMESY-SLFFLAALSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553349; PubChem:CID138551408
Local ready
Direct docking supported
E3L026012
BDB026012
BDBM553350
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCC(C)(O)CC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CCN1C
C29H33F4N7O3
603.621000
FECOYIGPRFHRGB-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553350
Local ready
Direct docking supported
E3L026013
BDB026013
BDBM553351
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCC(C)(O)CC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H35F4N7O3
617.648000
AWDSYHIFNGKFGE-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553351
Local ready
Direct docking supported
E3L026014
BDB026014
US11319299, Example 426
C[C@@H]1CN(c2ncc(-c3cc(NC(=O)c4cn(C)c(=O)cc4C(F)(F)F)c(N4CC[C@@H](N(C)C)C4)cc3F)cn2)C[C@H](C)O1
C30H35F4N7O3
617.648000
IYBGGAZGPWXFKR-WSTZPKSXSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553352; PubChem:CID138551490
Local ready
Direct docking supported
E3L026015
BDB026015
US11319299, Example 427
CCN(C)[C@@H]1CCN(c2cc(F)c(-c3cnc(N4C[C@@H](C)O[C@@H](C)C4)nc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C1
C31H37F4N7O3
631.675000
VCDKNSAHIQDQGN-SVFBPWRDSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553353; PubChem:CID138551470
Local ready
Direct docking supported
E3L026016
BDB026016
US11319299, Example 428
CCN(CC)[C@@H]1CCN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C1
C30H35F4N7O3
617.648000
CTAZSSJAKLEXTN-HXUWFJFHSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553354; PubChem:CID137377000
Local ready
Direct docking supported
E3L026017
BDB026017
US11319299, Example 430
C[C@@H]1CN(c2ncc(-c3cc(NC(=O)c4ccc(F)cc4C(F)(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)C[C@H](C)O1
C30H33F5N6O2
604.624000
JNEFXRAXVQTGTB-GBESFXJTSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553355; PubChem:CID138551337
Local ready
Direct docking supported
E3L026018
BDB026018
US11319299, Example 431
C[C@@H]1CN(c2ncc(-c3cc(NC(=O)c4ccc(F)cc4C(F)(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)cn2)C[C@H](C)O1
C31H35F5N6O2
618.651000
JSSGHMCWUFZLLD-FGYAAKKASA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553356; PubChem:CID138541973
Local ready
Direct docking supported
E3L026019
BDB026019
BDBM553358
C[C@H]1CN(c2ccc(-c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)CCO1
C29H32F4N6O3
588.606000
OKTHULVQMYYPPT-ROUUACIJSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553358; PubChem:CID138551407
Local ready
Direct docking supported
E3L026020
BDB026020
BDBM553359
C[C@@H]1CN(c2cc(F)c(-c3ccc(N4CCO[C@@H](C)C4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H34F4N6O3
602.633000
KEKQAYNNVBBMCE-OTWHNJEPSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553359; PubChem:CID138551296
Local ready
Direct docking supported