E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L025981
BDB025981
BDBM553319
C[C@@H]1CN(c2cc(F)c(N3CCN(c4ncccn4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C28H32F4N8O2
588.610000
UZGJTPVEDYEEBN-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553319; PubChem:CID137377033
Local ready
Direct docking supported
E3L025982
BDB025982
BDBM553320
C[C@@H]1CN(c2cc(F)c(C3=CCN(c4ncc(CO)cn4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H33F4N7O3
615.632000
YKUPOZWIEHPLBL-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553320
Local ready
Direct docking supported
E3L025983
BDB025983
BDBM553321
C[C@@H]1CN(c2ncc(-c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)C[C@H](C)O1
C29H34F3N7O3
585.631000
VLGSYPZDWAEVIO-OKZBNKHCSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553321
Local ready
Direct docking supported
E3L025984
BDB025984
BDBM553322
C[C@@H]1CN(c2ncc(-c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)CCO1
C28H32F3N7O3
571.604000
DOYFESYCMROXFX-DLBZAZTESA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553322; PubChem:CID137377185
Local ready
Direct docking supported
E3L025985
BDB025985
BDBM553323
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCO[C@@H](C)C4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)C[C@H](C)N1C
C29H34F3N7O3
585.631000
SQLWFXGIXXFUTA-KSZLIROESA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553323
Local ready
Direct docking supported
E3L025986
BDB025986
BDBM553324
C[C@H]1CN(c2ncc(-c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)CCO1
C28H32F3N7O3
571.604000
DOYFESYCMROXFX-IRXDYDNUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553324; PubChem:CID138551568
Local ready
Direct docking supported
E3L025987
BDB025987
BDBM553325
C[C@@H]1CN(c2cc(F)c(-c3ccnc(S(C)(=O)=O)n3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C25H26F4N6O4S
582.580000
CAXJXPWDTGGTAN-OKILXGFUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553325; PubChem:CID137376897
Local ready
Direct docking supported
E3L025988
BDB025988
US11319299, Example 400
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCCN(C)CC4)nc3)cc2NC(=O)c2ccc(F)cc2C(F)(F)F)CCN1C
C30H34F5N7O
603.640000
DBNDJZSXBHLXAG-IBGZPJMESA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553326; PubChem:CID138551462
Local ready
Direct docking supported
E3L025989
BDB025989
US11319299, Example 401
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCNCC4)nc3)cc2NC(=O)c2ccc(F)cc2C(F)(F)F)CCN1C
C28H30F5N7O
575.586000
DQNBTQRQDJILHR-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553327; PubChem:CID138551593
Local ready
Direct docking supported
E3L025990
BDB025990
US11319299, Example 402
C[C@H]1CN(c2cc(F)c(-c3ccc(N4CCOCC4)nc3)cc2NC(=O)c2ccc(F)cc2C(F)(F)F)CCN1C
C29H30F5N5O2
575.582000
ZGXSENXXYHGSLU-SFHVURJKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553328; PubChem:CID138551359
Local ready
Direct docking supported
E3L025991
BDB025991
BDBM553329
C[C@H]1CN(c2cc(F)c(-c3ccc(OC4CCOCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CCN1C
C29H31F4N5O4
589.590000
WHRUNICAOOYPSP-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553329; PubChem:CID138551759
Local ready
Direct docking supported
E3L025992
BDB025992
BDBM553330
C[C@@H]1CN(c2cc(F)c(C3=CCN(c4ncc(C#N)cn4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H30F4N8O2
610.616000
RLZZWABDAACKTM-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553330
Local ready
Direct docking supported
E3L025993
BDB025993
BDBM553331
C[C@@H]1CN(c2cc(F)c(C3=CCN(c4ncc(CN(C)C)cn4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C32H38F4N8O2
642.702000
CRUGURZVCOQSLC-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553331
Local ready
Direct docking supported
E3L025994
BDB025994
BDBM553332
C[C@@H]1CN(c2cc(F)c(C3=CCN(c4ncc(CN5CCOCC5)cn4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C34H40F4N8O3
684.739000
UPPIYRRSVKBITB-SZPZYZBQSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553332
Local ready
Direct docking supported
E3L025995
BDB025995
BDBM553333
C[C@@H]1CN(c2cc(F)c(C3=CCN(c4ncc(CN5CCN(C)CC5)cn4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C35H43F4N9O2
697.782000
HFUZKMUJEBWNEP-ZRZAMGCNSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553333
Local ready
Direct docking supported
E3L025996
BDB025996
BDBM553334
CC(C)COC(=O)N1CCC=C(c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)C1
C30H37F4N5O4
607.649000
FGHKOGRUQSYFLP-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553334
Local ready
Direct docking supported
E3L025997
BDB025997
BDBM553335
C[C@@H]1CN(c2cc(F)c(C3=CCCN(c4ncc(C=O)cn4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H31F4N7O3
613.616000
FZWBFYSUIPTSEB-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553335
Local ready
Direct docking supported
E3L025998
BDB025998
BDBM553336
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)CCN1C
C27H30F3N7O3
557.577000
JTIDGETVNJALSO-INIZCTEOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553336; PubChem:CID138551406
Local ready
Direct docking supported
E3L025999
BDB025999
BDBM553337
C[C@H]1CN(c2cc(F)c(-c3ccc(OCC4CC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)CCN1C
C28H30F3N5O3
541.574000
OPPPMJQHMRENPI-INIZCTEOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553337; PubChem:CID138551572
Local ready
Direct docking supported
E3L026000
BDB026000
BDBM553338
C[C@@H]1CN(c2cc(F)c(-c3ccc(N4CCOCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)C[C@H](C)N1C
C29H33F3N6O3
570.616000
PVSXPNZLIBTHFI-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553338; PubChem:CID137377233
Local ready
Direct docking supported