E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L026021
BDB026021
US11319299, Example 435
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCN(C5CC5)CC4)nc3)cc2NC(=O)c2ccc(F)cc2C(F)(F)F)CCN1C
C31H34F5N7O
615.651000
JAYSDHKFQZMPHP-IBGZPJMESA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553360; PubChem:CID138551419
Local ready
Direct docking supported
E3L026022
BDB026022
BDBM553361
C[C@@H]1CN(c2cc(F)c(-c3ccc(N4CCOCC4)c(F)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)C[C@H](C)N1C
C30H33F4N5O3
587.618000
AZWISGPFDRGYSP-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553361; PubChem:CID137377219
Local ready
Direct docking supported
E3L026023
BDB026023
BDBM553362
COc1cnc(N2CC=C(c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)C2)nc1
C29H31F4N7O3
601.605000
BNFLXMYSLOKIKT-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553362
Local ready
Direct docking supported
E3L026024
BDB026024
BDBM553363
COc1cc(N2CC=C(c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)C2)ncn1
C29H31F4N7O3
601.605000
PQUHWGWCJFCTHD-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553363
Local ready
Direct docking supported
E3L026025
BDB026025
BDBM553364
Cc1cnc(N2CC=C(c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)C2)nc1
C29H31F4N7O2
585.606000
FENWQPLSGDEGSV-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553364
Local ready
Direct docking supported
E3L026026
BDB026026
BDBM553365
C[C@@H]1CN(c2cc(F)c(C3=CCN(c4ncc(F)cn4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C28H28F5N7O2
589.569000
VCBKWHVHVHIBDF-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553365
Local ready
Direct docking supported
E3L026027
BDB026027
BDBM553366
C[C@@H]1CN(c2cc(F)c(C3=CCN(C(=O)N4CCCC4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H34F4N6O3
590.622000
JBXUSDGPYXABKV-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553366
Local ready
Direct docking supported
E3L026028
BDB026028
BDBM553367
C[C@@H]1CN(c2cc(F)c(C3=CCN(C(=O)c4cnccn4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H29F4N7O3
599.589000
DMAZTRITYHBPNH-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553367
Local ready
Direct docking supported
E3L026029
BDB026029
BDBM553368
CC(C)COC(=O)N1CC=C(c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)C1
C29H35F4N5O4
593.622000
MNAVPWLEHUTGHS-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553368
Local ready
Direct docking supported
E3L026030
BDB026030
BDBM553369
C[C@@H]1CN(c2cc(F)c(C3=CCN(c4ncc(C=O)cn4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H29F4N7O3
599.589000
GEAINAOSWZEQTI-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553369
Local ready
Direct docking supported
E3L026031
BDB026031
BDBM553370
C[C@@H]1CN(c2cc(F)c(-c3cnn(C)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C24H26F4N6O2
506.504000
KSHFMIOCNLDWBR-OKILXGFUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553370; PubChem:CID137376895
Local ready
Direct docking supported
E3L026032
BDB026032
BDBM553371
C[C@@H]1CN(c2cc(F)c(-c3nc(C#N)cs3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C24H22F4N6O2S
534.539000
FTFHDPJTFXQGMW-BETUJISGSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553371; PubChem:CID138541699
Local ready
Direct docking supported
E3L026033
BDB026033
BDBM553372
C[C@@H]1CN(c2cc(F)c(-c3ncc(C#N)s3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C24H22F4N6O2S
534.539000
OUVVDWFQOZUYER-BETUJISGSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553372; PubChem:CID138541746
Local ready
Direct docking supported
E3L026034
BDB026034
BDBM553373
C[C@H]1CN(c2cc(F)c(-c3ccc(N4CCOCC4)c(F)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)CCN1C
C29H31F4N5O3
573.591000
VPNIKBUGBQZCMO-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553373; PubChem:CID138542273
Local ready
Direct docking supported
E3L026035
BDB026035
US11319299, Example 449
C[C@@H]1CN(c2cc(F)c(-c3ccc(N4CCOCC4)c(F)c3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)F)C[C@H](C)N1C
C31H35F4N5O3
601.645000
IIVBFEPYECYNRM-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553374; PubChem:CID137377124
Local ready
Direct docking supported
E3L026036
BDB026036
US11319299, Example 450
C[C@H]1CN(c2ncc(-c3cc(NC(=O)c4cn(C)c(=O)cc4C(F)(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)CCO1
C29H33F4N7O3
603.621000
UQOLIVLMQOQTBL-ROUUACIJSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553375; PubChem:CID138551493
Local ready
Direct docking supported
E3L026037
BDB026037
US11319299, Example 451
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCO[C@@H](C)C4)nc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H35F4N7O3
617.648000
LGIULJQHFBTTOT-OTWHNJEPSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553376; PubChem:CID138551338
Local ready
Direct docking supported
E3L026038
BDB026038
US11319299, Example 452
C[C@H]1CN(c2ncc(-c3cc(NC(=O)c4ccc(F)cc4C(F)(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)CCO1
C29H31F5N6O2
590.597000
ICWHVNWEWUCKRA-ROUUACIJSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553377; PubChem:CID138551336
Local ready
Direct docking supported
E3L026039
BDB026039
US11319299, Example 453
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCO[C@@H](C)C4)nc3)cc2NC(=O)c2ccc(F)cc2C(F)(F)F)C[C@H](C)N1C
C30H33F5N6O2
604.624000
YHRUDJMQAFXZEQ-OTWHNJEPSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553378; PubChem:CID138551579
Local ready
Direct docking supported
E3L026040
BDB026040
US11319299, Example 454
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCN(C5CC5)CC4)nc3)cc2NC(=O)c2ccc(F)cc2C(F)(F)F)C[C@H](C)N1C
C32H36F5N7O
629.678000
COTJDORAMZYNMT-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553379; PubChem:CID137376839
Local ready
Direct docking supported