E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L026161
BDB026161
BDBM553501
CN(CC1CC1)[C@@H]1CCN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C1
C30H33F4N7O3
615.632000
LBKGKRVSMBZRPH-HXUWFJFHSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553501
Local ready
Direct docking supported
E3L026162
BDB026162
US11319299, Example 587
CN(CC1CC1)[C@@H]1CCN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C1
C31H35F4N7O3
629.659000
RMVKDRWLQONYMP-OAQYLSRUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553502; PubChem:CID137377102
Local ready
Direct docking supported
E3L026163
BDB026163
BDBM553503
C[C@@H]1CN(c2cc(F)c(C3=CCN(c4ncc(C#N)cn4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H28F4N8O2
596.589000
BFVXUOOXAPQLGP-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553503
Local ready
Direct docking supported
E3L026164
BDB026164
US11319299, Example 589
C[C@@H]1CN(c2cc(F)c(-c3ccc(F)c(C(N)=O)c3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C28H28F5N5O3
577.554000
AKGJASQJRQYWMS-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553504; PubChem:CID137377099
Local ready
Direct docking supported
E3L026165
BDB026165
US11319299, Example 590
C[C@@H]1CN(c2cc(F)c(-c3ccc(C(N)=O)c(F)c3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C28H28F5N5O3
577.554000
UURKMMIPYQNGSH-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553505; PubChem:CID137377155
Local ready
Direct docking supported
E3L026166
BDB026166
US11319299, Example 591
C[C@@H]1CN(c2cc(F)c(-c3ccc(F)c(C(N)=O)c3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)F)C[C@H](C)N1C
C28H29F4N5O3
559.564000
JRHFVEXVDLYRTB-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553506; PubChem:CID137376828
Local ready
Direct docking supported
E3L026167
BDB026167
US11319299, Example 592
C[C@@H]1CN(c2cc(F)c(-c3ccc(C(N)=O)c(F)c3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)F)C[C@H](C)N1C
C28H29F4N5O3
559.564000
NWWYQJMLOGIQFP-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553507; PubChem:CID137377284
Local ready
Direct docking supported
E3L026168
BDB026168
BDBM553508
C[C@H]1CN(c2nccc(-c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)n2)CCO1
C28H31F4N7O3
589.594000
VOITUAVREHVVLS-IRXDYDNUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553508; PubChem:CID138551396
Local ready
Direct docking supported
E3L026169
BDB026169
BDBM553509
C[C@@H]1CN(c2cc(F)c(-c3ccnc(N4CCO[C@@H](C)C4)n3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H33F4N7O3
603.621000
VWEOZFFYLTWZKK-KSZLIROESA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553509
Local ready
Direct docking supported
E3L026170
BDB026170
BDBM553510
C[C@H]1CN(c2cc(F)c(-c3ccc(C(N)=O)c(F)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)CCN1C
C26H25F4N5O3
531.510000
DCQZMFZABSJLNC-ZDUSSCGKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553510; PubChem:CID138551389
Local ready
Direct docking supported
E3L026171
BDB026171
BDBM553511
C[C@H]1CN(c2cc(F)c(-c3ccc(F)c(C(N)=O)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)CCN1C
C26H25F4N5O3
531.510000
IBXKOYOSDJDQEC-ZDUSSCGKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553511; PubChem:CID138551695
Local ready
Direct docking supported
E3L026172
BDB026172
BDBM553512
CNC(=O)c1ccc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)F)c(N3CCN(C)[C@@H](C)C3)cc2F)cc1F
C27H27F4N5O3
545.537000
MWQQICGTMRGAPT-AWEZNQCLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553512; PubChem:CID138551541
Local ready
Direct docking supported
E3L026173
BDB026173
BDBM553513
CNC(=O)c1cc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)F)c(N3CCN(C)[C@@H](C)C3)cc2F)ccc1F
C27H27F4N5O3
545.537000
LDVNYBFWAXOWCT-AWEZNQCLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553513; PubChem:CID138551584
Local ready
Direct docking supported
E3L026174
BDB026174
BDBM553514
C[C@H]1CN(c2cc(F)c(-c3nccc(N4CCOCC4)n3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CCN1C
C27H29F4N7O3
575.567000
FVKSRRAKFKIPSH-INIZCTEOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553514; PubChem:CID138551609
Local ready
Direct docking supported
E3L026175
BDB026175
BDBM553515
CC(C)OC(=O)N1CC=C(c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)C1
C28H33F4N5O4
579.595000
GIGUNHMLIKAVDF-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553515
Local ready
Direct docking supported
E3L026176
BDB026176
BDBM553516
CC(C)OC(=O)N1CCC=C(c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)C1
C29H35F4N5O4
593.622000
CQBAJGDAFYIFKN-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553516
Local ready
Direct docking supported
E3L026177
BDB026177
BDBM553517
CC(C)OC(=O)N1CC=C(c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)CC1
C29H35F4N5O4
593.622000
JGGWKKVJCIBRMR-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553517
Local ready
Direct docking supported
E3L026178
BDB026178
BDBM553518
CNC(=O)c1ccc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)cc1F
C28H28F5N5O3
577.554000
OSDAAGGVXJJYGW-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553518; PubChem:CID137376997
Local ready
Direct docking supported
E3L026179
BDB026179
BDBM553519
CNC(=O)c1cc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)ccc1F
C28H28F5N5O3
577.554000
FTCAFFRXEGSOCB-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553519; PubChem:CID137376800
Local ready
Direct docking supported
E3L026180
BDB026180
BDBM553520
CNC(=O)c1ccc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)cc1F
C28H29F4N5O3
559.564000
ICYIWTCVHAIWIT-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553520; PubChem:CID137377053
Local ready
Direct docking supported