E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L026141
BDB026141
US11319299, Example 558
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCOC(C)(C)C4)nc3)cc2NC(=O)c2ccc(F)cc2C(F)(F)F)CCN1C
C30H33F5N6O2
604.624000
YRXOMHVWDNWURK-SFHVURJKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553481; PubChem:CID138551494
Local ready
Direct docking supported
E3L026142
BDB026142
US11319299, Example 559
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOC(C)(C)C4)nc3)cc2NC(=O)c2ccc(F)cc2C(F)(F)F)C[C@H](C)N1C
C31H35F5N6O2
618.651000
YWOYODRMXPTJIB-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553482; PubChem:CID138541826
Local ready
Direct docking supported
E3L026143
BDB026143
US11319299, Example 560
C[C@H]1CN(c2cc(F)c(-c3ccc(N4CCN(CC5CC5)CC4)nc3)cc2NC(=O)c2ccc(F)cc2C(F)(F)F)CCN1C
C33H37F5N6O
628.690000
SPXQNSHYQNJIIQ-NRFANRHFSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553483; PubChem:CID138551858
Local ready
Direct docking supported
E3L026144
BDB026144
BDBM553484
O=C(Nc1cc(-c2cnc(N3CCOCC3)nc2)c(F)cc1N1CCN(C2CC2)CC1)c1c[nH]c(=O)cc1C(F)(F)F
C28H29F4N7O3
587.578000
RONIYNCQOSAEOQ-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553484; PubChem:CID137377713
Local ready
Direct docking supported
E3L026145
BDB026145
BDBM553485
C[C@@H]1CN(c2cc(F)c(-c3c[nH]c(=O)c(F)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C25H24F5N5O3
537.489000
XGHTZZJJAIZPNU-BETUJISGSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553485; PubChem:CID137377103
Local ready
Direct docking supported
E3L026146
BDB026146
BDBM553486
C[C@@H]1CN(c2cc(F)c(-c3cncc(NC(=O)OCc4ccccc4)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C33H32F4N6O4
652.649000
NEOHAKISUGJWSB-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553486; PubChem:CID137376797
Local ready
Direct docking supported
E3L026147
BDB026147
BDBM553487
C[C@@H]1CN(c2cc(F)c(-c3cc(F)c(=O)n(C)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C26H26F5N5O3
551.516000
LXOXFQNDYHNQBS-OKILXGFUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553487; PubChem:CID137377244
Local ready
Direct docking supported
E3L026148
BDB026148
BDBM553488
COc1ccc(C(=O)N2CC=C(c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)CC2)cc1
C33H35F4N5O4
641.666000
XWVVCBVOWZMZND-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553488
Local ready
Direct docking supported
E3L026149
BDB026149
BDBM553489
C[C@@H]1CN(c2cc(F)c(-c3cnc4c(c3)CC(=O)N4)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C27H26F4N6O3
558.536000
DFRUTXFFXGIRRJ-OKILXGFUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553489; PubChem:CID137377078
Local ready
Direct docking supported
E3L026150
BDB026150
BDBM553490
C[C@@H]1CN(c2cc(F)c(-c3ccn(C)c(=O)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C26H27F4N5O3
533.526000
SOMUABLGEJBZMQ-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553490; PubChem:CID138541810
Local ready
Direct docking supported
E3L026151
BDB026151
BDBM553491
C[C@@H]1CN(c2cc(F)c(-c3ccc(=O)n(C)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C26H27F4N5O3
533.526000
VAHYSCNKVULPMY-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553491; PubChem:CID137377072
Local ready
Direct docking supported
E3L026152
BDB026152
BDBM553492
C[C@@H]1CN(c2cc(F)c(C3=CCN(C(=O)C4CCCCC4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C32H39F4N5O3
617.688000
LVVNUCSHHWHTMK-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553492
Local ready
Direct docking supported
E3L026153
BDB026153
BDBM553493
COCCCN(C)C1CCN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C1
C30H35F4N7O4
633.647000
ZHUQSBBPSMETMX-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553493; PubChem:CID137377315
Local ready
Direct docking supported
E3L026154
BDB026154
BDBM553494
C[C@@H]1CN(c2cc(F)c(C3=CCN(C(=O)c4cnccn4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H31F4N7O3
613.616000
FKZGKLIIKOALIN-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553494
Local ready
Direct docking supported
E3L026155
BDB026155
BDBM553495
COCCN(C)[C@@H]1CCN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C1
C29H33F4N7O4
619.620000
ZAQUKCIZHSPYRP-LJQANCHMSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553495
Local ready
Direct docking supported
E3L026156
BDB026156
BDBM553496
C[C@@H]1CN(c2cc(F)c(-c3ccc(S(C)(=O)=O)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C26H27F4N5O4S
581.592000
JMYCYUBOPDRIKQ-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553496; PubChem:CID138541802
Local ready
Direct docking supported
E3L026157
BDB026157
BDBM553497
C[C@@H]1CN(c2cc(F)c(-c3cnc(NS(C)(=O)=O)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C25H27F4N7O4S
597.595000
KEPXZDWUBHOXMF-OKILXGFUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553497; PubChem:CID138541602
Local ready
Direct docking supported
E3L026158
BDB026158
BDBM553498
C[C@@H]1CN(c2cc(F)c(C3=CCCN(c4ncc(C#N)cn4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H30F4N8O2
610.616000
QBSWLDZSWOQKON-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553498
Local ready
Direct docking supported
E3L026159
BDB026159
BDBM553499
C[C@@H]1CN(c2cc(F)c(C3=CCCN(S(C)(=O)=O)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C26H31F4N5O4S
585.624000
QOQCJXGUVIPDPY-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553499
Local ready
Direct docking supported
E3L026160
BDB026160
BDBM553500
C[C@@H]1CN(c2cc(F)c(C3=CCN(S(C)(=O)=O)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C26H31F4N5O4S
585.624000
FIXXHLBSUPPUIE-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553500
Local ready
Direct docking supported