E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L026201
BDB026201
BDBM553541
C[C@H]1CN(c2cc(F)c(-c3cc(C(=O)NC(C)(C)CC(C)(C)C)c(F)cc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)CCN1C
C34H40F5N5O3
661.716000
WQZAXGIYAYDDAW-SFHVURJKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553541
Local ready
Direct docking supported
E3L026202
BDB026202
BDBM553543
C[C@H]1CN(c2cc(F)c(C3=CCN(C(=O)N4CCCC4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)CCN1C
C28H33F3N6O3
558.605000
AHMJFSLJDNGTLF-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553543; PubChem:CID138542278
Local ready
Direct docking supported
E3L026203
BDB026203
BDBM553544
C[C@@H]1CN(c2cc(F)c(C3=CCN(C(=O)OC4(C)CCC4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)C[C@H](C)N1C
C30H36F3N5O4
587.643000
DIJOKRGQBMGTFC-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553544
Local ready
Direct docking supported
E3L026204
BDB026204
BDBM553545
C[C@H]1CN(c2cc(F)c(C3=CCN(C(=O)OC4(C)CCC4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)CCN1C
C29H34F3N5O4
573.616000
UPAXPZHOCXKMHO-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553545
Local ready
Direct docking supported
E3L026205
BDB026205
BDBM553546
C[C@@H]1CN(c2cc(F)c(-c3cc(C(N)=O)c(F)cc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C27H25F6N5O3
581.517000
JIUBCXYLNFKKII-BETUJISGSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553546; PubChem:CID137377031
Local ready
Direct docking supported
E3L026206
BDB026206
BDBM553547
C[C@@H]1CN(c2cc(F)c(-c3cc(C(N)=O)c(F)cc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)C[C@H](C)N1C
C27H26F5N5O3
563.527000
AZOLQXZGMHWSRF-BETUJISGSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553547; PubChem:CID137376825
Local ready
Direct docking supported
E3L026207
BDB026207
US11319299, Example 634
C[C@@H]1CN(c2cc(F)c(-c3cc(C(N)=O)c(F)cc3F)cc2NC(=O)c2ccc(F)cc2C(F)(F)F)C[C@H](C)N1C
C28H25F7N4O2
582.520000
MHDIYAYCWAPWKU-OKILXGFUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553548; PubChem:CID137377406
Local ready
Direct docking supported
E3L026208
BDB026208
US11319299, Example 635
C[C@H]1CN(c2cc(F)c(-c3cc(C(N)=O)c(F)cc3F)cc2NC(=O)c2ccc(F)cc2C(F)(F)F)CCN1C
C27H23F7N4O2
568.493000
DDDNHKGJKKBMHG-ZDUSSCGKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553549; PubChem:CID138551503
Local ready
Direct docking supported
E3L026209
BDB026209
US11319299, Example 636
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCC(C)(O)CC4)nc3)cc2NC(=O)c2ccc(F)cc2C(F)(F)F)C[C@H](C)N1C
C31H35F5N6O2
618.651000
XGLNLFUCFFWRFI-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553550; PubChem:CID137376762
Local ready
Direct docking supported
E3L026210
BDB026210
BDBM553551
C[C@@H]1CN(c2cc(F)c(C3=CCN(C(=O)OC4CC(F)(F)C4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)C[C@H](C)N1C
C29H32F5N5O4
609.596000
VTDBMBSOMILQMQ-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553551
Local ready
Direct docking supported
E3L026211
BDB026211
BDBM553552
C[C@H]1CN(c2cc(F)c(C3=CCN(C(=O)OC4CC(F)(F)C4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)CCN1C
C28H30F5N5O4
595.569000
GZWZYFIGMGLIHH-HNNXBMFYSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553552
Local ready
Direct docking supported
E3L026212
BDB026212
BDBM553553
C[C@H]1CN(c2cc(F)c(C3=CCN(c4cnc(C#N)nc4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)CCN1C
C29H29F3N8O2
578.599000
NQAPVMVOISWMGQ-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553553
Local ready
Direct docking supported
E3L026213
BDB026213
US11319299, Example 640
C[C@@H]1CN(c2ncc(-c3cc(NC(=O)c4cn(C)c(=O)cc4C(F)(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)cn2)CCO1
C30H35F4N7O3
617.648000
LGIULJQHFBTTOT-CEXWTWQISA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553554; PubChem:CID138541636
Local ready
Direct docking supported
E3L026214
BDB026214
US11319299, Example 641
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCC(C)(O)CC4)nc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H37F4N7O3
631.675000
WSMLVDYZBINLDJ-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553555; PubChem:CID137377157
Local ready
Direct docking supported
E3L026215
BDB026215
BDBM553556
C[C@@H]1CN(c2cc(F)c(C3=CCCN(c4nc(C#N)cs4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H29F4N7O2S
615.657000
DLEWMTMWGQYPIP-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553556
Local ready
Direct docking supported
E3L026216
BDB026216
BDBM553557
C[C@@H]1CN(c2cc(F)c(C3=CCCN(c4ncco4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C28H30F4N6O3
574.579000
YYRZTOMBPLXKSI-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553557
Local ready
Direct docking supported
E3L026217
BDB026217
BDBM553559
COc1cnc(N2CCC=C(c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)C2)nc1
C30H34F3N7O3
597.642000
MIHGFIYHNJAJKO-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553559
Local ready
Direct docking supported
E3L026218
BDB026218
BDBM553560
C[C@@H]1CN(c2cc(F)c(C3=CCN(c4ncc(C=O)cn4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)C[C@H](C)N1C
C30H32F3N7O3
595.626000
VJLYYEYHUDDEMO-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553560
Local ready
Direct docking supported
E3L026219
BDB026219
BDBM553561
COc1cc(N2CC=C(c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)CC2)ncn1
C30H34F3N7O3
597.642000
WXDBFDYTWNHKTJ-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553561
Local ready
Direct docking supported
E3L026220
BDB026220
BDBM553562
CCOC(=O)N1CCC=C(c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)C1
C28H34F3N5O4
561.605000
JJHLULVDYGHDEH-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553562
Local ready
Direct docking supported