E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L026101
BDB026101
US11319299, Example 517
C[C@@H]1CN(c2cc(F)c(-c3ccc(N4CCO[C@@H](C)C4)nc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)F)C[C@H](C)N1C
C31H37F3N6O3
598.670000
JPAMAMFUQDMPRD-ZCNNSNEGSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553441; PubChem:CID138542513
Local ready
Direct docking supported
E3L026102
BDB026102
US11319299, Example 518
C[C@@H]1CN(c2ccc(-c3cc(NC(=O)c4cn(C)c(=O)cc4C(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)cn2)C[C@H](C)O1
C32H39F3N6O3
612.697000
MJBDOBUCPDQIEC-FXELSEDVSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553442; PubChem:CID138541685
Local ready
Direct docking supported
E3L026103
BDB026103
US11319299, Example 519
C[C@H]1CN(c2ccc(-c3cc(NC(=O)c4cn(C)c(=O)cc4C(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)CCO1
C30H35F3N6O3
584.643000
GUMGGQGWDFBAJZ-OALUTQOASA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553443; PubChem:CID138542481
Local ready
Direct docking supported
E3L026104
BDB026104
BDBM553444
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCOC[C@@H]4C)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)CCN1C
C28H32F3N7O3
571.604000
YXWUASKUCWSXGM-IRXDYDNUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553444; PubChem:CID138551506
Local ready
Direct docking supported
E3L026105
BDB026105
US11319299, Example 522
C[C@H]1CN(c2cc(F)c(-c3ccc(OCC4CC4)nc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)CCN1C
C29H31F4N5O3
573.591000
LGLGPJVPAOVCOA-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553445; PubChem:CID138542597
Local ready
Direct docking supported
E3L026106
BDB026106
US11319299, Example 523
C[C@@H]1CN(c2cc(F)c(-c3csc(C(=O)NCC4CC4)n3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H32F4N6O3S
620.673000
XKFXVWTTZHPMSW-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553446; PubChem:CID137377226
Local ready
Direct docking supported
E3L026107
BDB026107
US11319299, Example 524
C[C@@H]1CN(c2cc(F)c(-c3csc(C(=O)N(C)CC4CC4)n3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H34F4N6O3S
634.700000
HLWJDWJTXLGGCJ-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553447; PubChem:CID137376801
Local ready
Direct docking supported
E3L026108
BDB026108
US11319299, Example 525
C[C@@H]1CN(c2cc(F)c(-c3csc(C(=O)NC4CCCCC4)n3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H36F4N6O3S
648.727000
BQSBVEONZMXQGE-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553448; PubChem:CID137377422
Local ready
Direct docking supported
E3L026109
BDB026109
US11319299, Example 526
C[C@@H]1CN(c2cc(F)c(-c3csc(C(=O)N(C)C4CCCCC4)n3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C32H38F4N6O3S
662.754000
SCMNLMDUWQDRHX-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553449; PubChem:CID137377292
Local ready
Direct docking supported
E3L026110
BDB026110
US11319299, Example 527
C[C@@H]1CN(c2cc(F)c(-c3csc(C(=O)N4CCOCC4)n3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H32F4N6O4S
636.672000
LOTZOUXGDXHJKA-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553450; PubChem:CID137376940
Local ready
Direct docking supported
E3L026111
BDB026111
US11319299, Example 528
C[C@@H]1CN(c2cc(F)c(-c3csc(C(=O)N4CCN(C)CC4)n3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H35F4N7O3S
649.715000
OGQDCUJPQMPAIM-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553451; PubChem:CID138541808
Local ready
Direct docking supported
E3L026112
BDB026112
US11319299, Example 529
C[C@H]1CN(c2cc(F)c(-c3ccc(N4CCNCC4)cc3)cc2NC(=O)c2ccc(F)cc2C(F)(F)F)CCN1C
C30H32F5N5O
573.610000
BLPJPUPAZTVKIQ-IBGZPJMESA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553452; PubChem:CID138551467
Local ready
Direct docking supported
E3L026113
BDB026113
US11319299, Example 530
C[C@H]1CN(c2cc(F)c(-c3ccc(N4CCNCC4)nc3)cc2NC(=O)c2ccc(F)cc2C(F)(F)F)CCN1C
C29H31F5N6O
574.598000
DCMCFPHKSHIZQQ-SFHVURJKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553453; PubChem:CID138551583
Local ready
Direct docking supported
E3L026114
BDB026114
BDBM553454
C[C@@H]1CN(c2cc(F)c(-c3csc(C(=O)NCC4CC4)n3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C28H30F4N6O3S
606.646000
VTOSQTKUMKEBDC-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553454
Local ready
Direct docking supported
E3L026115
BDB026115
BDBM553455
C[C@@H]1CN(c2cc(F)c(-c3csc(C(=O)N(C)CC4CC4)n3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H32F4N6O3S
620.673000
CNUABVBROAXZKT-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553455
Local ready
Direct docking supported
E3L026116
BDB026116
BDBM553456
C[C@@H]1CN(c2cc(F)c(-c3csc(C(=O)NC4CCCCC4)n3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H34F4N6O3S
634.700000
VAJWDVMMYOLZAH-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553456; PubChem:CID138541680
Local ready
Direct docking supported
E3L026117
BDB026117
BDBM553457
C[C@@H]1CN(c2cc(F)c(-c3csc(C(=O)N(C)C4CCCCC4)n3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H36F4N6O3S
648.727000
ZPRHOPDJFRALGQ-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553457
Local ready
Direct docking supported
E3L026118
BDB026118
BDBM553458
C[C@@H]1CN(c2cc(F)c(-c3csc(C(=O)N4CCOCC4)n3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C28H30F4N6O4S
622.645000
IIYOMRQWPPDRDB-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553458; PubChem:CID137376996
Local ready
Direct docking supported
E3L026119
BDB026119
BDBM553459
C[C@@H]1CN(c2cc(F)c(-c3csc(C(=O)N4CCN(C)CC4)n3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H33F4N7O3S
635.688000
LJQDXDTWMRODAL-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553459
Local ready
Direct docking supported
E3L026120
BDB026120
BDBM553460
C[C@@H]1CN(c2cc(F)c(-c3ccnc(NC4CCCCC4)n3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H35F4N7O2
601.649000
SOTGNXURCKRJSZ-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553460; PubChem:CID137376843
Local ready
Direct docking supported