E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L026641
BDB026641
BDBM562090
Cc1nccc(-c2ccc(NC(=O)Cn3cnc4c3CCCC4)cc2)n1
C20H21N5O
347.422000
SIIAZODEFAHKEC-UHFFFAOYSA-N O60260 E3 ubiquitin-protein ligase parkin
BindingDB, PubChem
BindingDB:BDBM562090; PubChem:CID134220625
Local ready
Direct docking supported
E3L026642
BDB026642
BDBM562091
O=C(Cn1cnc2c1CCCC2)Nc1ccc(-c2ccccc2F)nn1
C19H18FN5O
351.385000
MIAYYKNKFANYFX-UHFFFAOYSA-N O60260 E3 ubiquitin-protein ligase parkin
BindingDB, PubChem
BindingDB:BDBM562091; PubChem:CID134220627
Local ready
Direct docking supported
E3L026643
BDB026643
BDBM562092
O=C(Cn1cnc2c1CCCC2)Nc1cnc(-c2ccccc2)nc1
C19H19N5O
333.395000
QCUUPUNWUCYNKA-UHFFFAOYSA-N O60260 E3 ubiquitin-protein ligase parkin
BindingDB, PubChem
BindingDB:BDBM562092; PubChem:CID134220626
Local ready
Direct docking supported
E3L026644
BDB026644
BDBM562093
Cc1ccnc(-c2ccc(NC(=O)Cn3cnc4c3CCCC4)cc2)n1
C20H21N5O
347.422000
NRTMTQRPBULFAY-UHFFFAOYSA-N O60260 E3 ubiquitin-protein ligase parkin
BindingDB, PubChem
BindingDB:BDBM562093; PubChem:CID134220628
Local ready
Direct docking supported
E3L026645
BDB026645
BDBM562094
Cc1cc(NC(=O)Cn2cnc3c2CCCC3)ccc1-c1ccncc1
C21H22N4O
346.434000
IVWCQXIYDWRILB-UHFFFAOYSA-N O60260 E3 ubiquitin-protein ligase parkin
BindingDB, PubChem
BindingDB:BDBM562094; PubChem:CID134220629
Local ready
Direct docking supported
E3L026646
BDB026646
2-(2-phenylimidazol-1-yl)-N-(4-phenylphenyl)acetamide
O=C(Cn1ccnc1-c1ccccc1)Nc1ccc(-c2ccccc2)cc1
C23H19N3O
353.425000
COKJKNQMLICVBJ-UHFFFAOYSA-N O60260 E3 ubiquitin-protein ligase parkin
BindingDB, PubChem
BindingDB:BDBM562095; PubChem:CID134220562
Local ready
Direct docking supported
E3L026647
BDB026647
2-imidazol-1-yl-N-(3-methyl-4-phenylphenyl)acetamide
Cc1cc(NC(=O)Cn2ccnc2)ccc1-c1ccccc1
C18H17N3O
291.354000
LUNCHPFRBQNLDB-UHFFFAOYSA-N O60260 E3 ubiquitin-protein ligase parkin
BindingDB, PubChem
BindingDB:BDBM562096; PubChem:CID134220546
Local ready
Direct docking supported
E3L026648
BDB026648
BDBM562097
Cc1nc2c(c(N3CCCN(Cc4ccccc4)CC3)n1)CCCC2
C21H28N4
336.483000
DUPFHSJLAVGWMQ-UHFFFAOYSA-N O60260 E3 ubiquitin-protein ligase parkin
BindingDB, PubChem
BindingDB:BDBM562097; PubChem:CID71858582
Local ready
Direct docking supported
E3L026649
BDB026649
BDBM562098
c1ccc(CN2CCCN(c3ncnc4c3CCCCC4)CC2)cc1
C21H28N4
336.483000
HPSROFOQHAQLCK-UHFFFAOYSA-N O60260 E3 ubiquitin-protein ligase parkin
BindingDB, PubChem
BindingDB:BDBM562098; PubChem:CID134220547
Local ready
Direct docking supported
E3L026650
BDB026650
BDBM562099
c1ccc(CN2CCCN(c3ncnc4c3CCCC4)CC2)cc1
C20H26N4
322.456000
HNQVZHLYKDEKEM-UHFFFAOYSA-N O60260 E3 ubiquitin-protein ligase parkin
BindingDB, PubChem
BindingDB:BDBM562099; PubChem:CID134220545
Local ready
Direct docking supported
E3L026651
BDB026651
BDBM562100
Cc1nc2c(c(N3CCCN(Cc4csc(C)n4)CC3)n1)CCCC2
C19H27N5S
357.527000
JIDHIJFFLUXFPU-UHFFFAOYSA-N O60260 E3 ubiquitin-protein ligase parkin
BindingDB, PubChem
BindingDB:BDBM562100; PubChem:CID133460442
Local ready
Direct docking supported
E3L026652
BDB026652
BDBM562101
COc1ccc(CN2CCCN(c3ncnc4c3CN(C)CC4)CC2)cc1
C21H29N5O
367.497000
AXWZMIXISKDNKB-UHFFFAOYSA-N O60260 E3 ubiquitin-protein ligase parkin
BindingDB, PubChem
BindingDB:BDBM562101; PubChem:CID134220649
Local ready
Direct docking supported
E3L026653
BDB026653
BDBM562102
Cc1nc2c(c(N3CCN(C(=O)c4ccccc4)CC3)n1)CCCC2
C20H24N4O
336.439000
NSNJHEKQMPTLLL-UHFFFAOYSA-N O60260 E3 ubiquitin-protein ligase parkin
BindingDB, PubChem
BindingDB:BDBM562102; PubChem:CID134220651
Local ready
Direct docking supported
E3L026654
BDB026654
BDBM562103
Cc1nc2c(c(N3CCCN(Cc4noc(C5CC5)n4)CC3)n1)CCCC2
C20H28N6O
368.485000
WYVUQMYDPGJUJJ-UHFFFAOYSA-N O60260 E3 ubiquitin-protein ligase parkin
BindingDB, PubChem
BindingDB:BDBM562103; PubChem:CID133460446
Local ready
Direct docking supported
E3L026655
BDB026655
BDBM562104
Cc1nc2c(c(N3CCCN(Cc4cccs4)CC3)n1)CCCC2
C19H26N4S
342.512000
CMPKQAXJLKRVGC-UHFFFAOYSA-N O60260 E3 ubiquitin-protein ligase parkin
BindingDB, PubChem
BindingDB:BDBM562104; PubChem:CID138700698
Local ready
Direct docking supported
E3L026656
BDB026656
BDBM562105
Cc1nc2c(c(N3CCN(Cc4ccccc4)C(C)(C)C3)n1)CCCC2
C22H30N4
350.510000
FUAFXSZBWXBZCH-UHFFFAOYSA-N O60260 E3 ubiquitin-protein ligase parkin
BindingDB, PubChem
BindingDB:BDBM562105; PubChem:CID138700699
Local ready
Direct docking supported
E3L026657
BDB026657
BDBM562106
Cc1nc2c(c(N3CCCN(Cc4ccc(Cl)cc4)CC3)n1)CCCC2
C21H27ClN4
370.928000
RERONISWSRWLKF-UHFFFAOYSA-N O60260 E3 ubiquitin-protein ligase parkin
BindingDB, PubChem
BindingDB:BDBM562106; PubChem:CID138700701
Local ready
Direct docking supported
E3L026658
BDB026658
4-(4-Benzyl-1,4-diazepan-1-yl)pyrido[2,3-d]pyrimidine
c1ccc(CN2CCCN(c3ncnc4ncccc34)CC2)cc1
C19H21N5
319.412000
JJQQXJUZVUSDOE-UHFFFAOYSA-N O60260 E3 ubiquitin-protein ligase parkin
BindingDB, PubChem
BindingDB:BDBM562107; PubChem:CID134220595
Local ready
Direct docking supported
E3L026659
BDB026659
US11401256, Example 2
CNC(=O)c1ccc2c(c1)nc(-c1cc(-c3cncn3C)nc3ccccc13)n2-c1ccc2c(c1)CCC(=O)N2
C31H25N7O2
527.588000
QXGJZPQVKZRAFS-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM562109; PubChem:CID137530761
Local ready
Direct docking supported
E3L026660
BDB026660
US11401256, Example 3
CCc1nc2cc(C(=O)NC)ccc2n1-c1ccc2c(c1)CCC(=O)N2
C20H20N4O2
348.406000
ODJADIRVHYABHQ-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM562110; PubChem:CID137526021
Local ready
Direct docking supported