E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L027201
BDB027201
US11420970, Example 16
COc1ccc(-c2cc(Cn3cnc4c(N)ncnc43)c(N3C[C@H](N)CC(F)(F)C3)cn2)cc1F
C23H23F3N8O
484.486000
NUGJXEFLHUSBBU-OAHLLOKOSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM567815; PubChem:CID156073291
Local ready
Direct docking supported
E3L027202
BDB027202
US11420970, Example 17
Nc1ncnc2c1ncn2Cc1cc(-c2cccc(F)c2)ncc1N1CCC(F)(F)C(N)C1
C22H21F3N8
454.460000
KJVWJAOMLPDQCX-UHFFFAOYSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM567816; PubChem:CID156073292
Local ready
Direct docking supported
E3L027203
BDB027203
US11420970, Example 18
N#CC1CCN(c2cnc(-c3ccc(F)c(F)c3)cc2Cn2cnc3c(N)ncnc32)CC1N
C23H21F2N9
461.480000
SFTMCBNTGUJKSK-UHFFFAOYSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM567817; PubChem:CID156073296
Local ready
Direct docking supported
E3L027204
BDB027204
US11420970, Example 19
COc1ccc(-c2cc(Cn3cnc4c(N)ncc(Cl)c43)c(N3CCC[C@@H](N)C3)cn2)cc1F
C24H25ClFN7O
481.963000
KKGDABGBVJHUKL-MRXNPFEDSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM567818; PubChem:CID156073295
Local ready
Direct docking supported
E3L027205
BDB027205
US11420970, Example 20
COc1ccc(-c2cc(Cn3cnc4c(N)ncnc43)c(N3CCC[C@@](C)(N)C3)cn2)cc1F
C24H27FN8O
462.533000
GYWOYWWKVOFNII-XMMPIXPASA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM567819; PubChem:CID156073297
Local ready
Direct docking supported
E3L027206
BDB027206
US11420970, Example 21
COc1ccc(-c2cc(Cn3cnc4c(N)nccc43)c(N3CCC[C@@H](N)C3)cn2)cc1F
C24H26FN7O
447.518000
BNFGPUKRKDNHAD-QGZVFWFLSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM567820; PubChem:CID156073244
Local ready
Direct docking supported
E3L027207
BDB027207
US11420970, Example 22
CC(C)(C)OC(=O)NC1(COC2CC2)CCCC(c2cnc(-c3ccc(F)c(F)c3)cc2Cn2cnc3c(N(C(=O)OC(C)(C)C)C(=O)OC(C)(C)C)ncnc32)C1
C42H53F2N7O7
805.924000
TTWUHYDPCXBQBA-UHFFFAOYSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM567821; PubChem:CID164850541
Local ready
Direct docking supported
E3L027208
BDB027208
US11420970, Example 23
COC[C@@]1(N)CCCN(c2cnc(-c3ccc(F)c(F)c3)cc2Cn2cnc3c(N)ncnc32)C1
C24H26F2N8O
480.523000
OPJPZRUHVUFNAY-XMMPIXPASA-N O96028, Q96L73, Q9BZ95 Histone-lysine N-methyltransferase, H3 lysine-36 specific, Histone-lysine N-methyltransferase NSD3, Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM567822; PubChem:CID156073366
Local ready
Direct docking supported
E3L027209
BDB027209
US11420970, Example 24
COC[C@@]1(N)CCCN(c2cnc(-c3cccc(F)c3)cc2Cn2cnc3c(N)ncnc32)C1
C24H27FN8O
462.533000
ONDDZQBUDLRTPM-XMMPIXPASA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM567823; PubChem:CID156073370
Local ready
Direct docking supported
E3L027210
BDB027210
US11420970, Example 25
COc1ccc(-c2cc(Cn3cnc4c(N)ncnc43)c(N3CCC[C@](N)(COC(C)C)C3)cn2)cc1F
C27H33FN8O2
520.613000
VCCJVEMOXLGIOU-HHHXNRCGSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM567824; PubChem:CID156073371
Local ready
Direct docking supported
E3L027211
BDB027211
US11420970, Example 26
COC[C@@]1(N)CCCN(c2cnc(-c3cc(Cl)ccc3F)cc2Cn2cnc3c(N)ncnc32)C1
C24H26ClFN8O
496.978000
FUEGZWGKKBGDBO-XMMPIXPASA-N O96028, Q96L73, Q9BZ95 Histone-lysine N-methyltransferase NSD3, Histone-lysine N-methyltransferase, H3 lysine-36 specific, Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM567825; PubChem:CID156073369
Local ready
Direct docking supported
E3L027212
BDB027212
US11420970, Example 27
COC[C@@]1(N)CCCN(c2cnc(-c3cccc(Cl)c3)cc2Cn2cnc3c(N)ncnc32)C1
C24H27ClN8O
478.988000
KTUHWZKSTCXWJK-XMMPIXPASA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM567826; PubChem:CID156073301
Local ready
Direct docking supported
E3L027213
BDB027213
US11420970, Example 28
COC[C@@]1(N)CCCN(c2cnc(-c3ccc(F)c(Cl)c3)cc2Cn2cnc3c(N)ncnc32)C1
C24H26ClFN8O
496.978000
UKOSZBQLKHMNOY-XMMPIXPASA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM567827; PubChem:CID156073302
Local ready
Direct docking supported
E3L027214
BDB027214
US11420970, Example 29
COC[C@@]1(N)CCCN(c2cnc(-c3ccc(F)cc3F)cc2Cn2cnc3c(N)ncnc32)C1
C24H26F2N8O
480.523000
DGGOQICQTAGRMC-XMMPIXPASA-N O96028, Q96L73, Q9BZ95 Histone-lysine N-methyltransferase NSD2, Histone-lysine N-methyltransferase NSD3, Histone-lysine N-methyltransferase, H3 lysine-36 specific
BindingDB, PubChem
BindingDB:BDBM567828; PubChem:CID156073304
Local ready
Direct docking supported
E3L027215
BDB027215
US11420970, Example 30
Nc1ncnc2c1ncn2Cc1cc(-c2ccc(F)c(F)c2)ncc1N1CCC[C@](N)(COC2CCC2)C1
C27H30F2N8O
520.588000
JVKDBWFAAAXKFO-HHHXNRCGSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM567829; PubChem:CID156073303
Local ready
Direct docking supported
E3L027216
BDB027216
US11420970, Example 31
COc1ccc(-c2cc(Cn3cnc4c(N)ncnc43)c(N3CCC[C@](N)(COC4CC4)C3)cn2)cc1F
C27H31FN8O2
518.597000
GPTYHWNTLKIMDK-HHHXNRCGSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM567830; PubChem:CID156073305
Local ready
Direct docking supported
E3L027217
BDB027217
US11420970, Example 32
COc1ccc(-c2cc(Cn3cnc4c(N)ncnc43)c(N3CCC[C@](N)(COC4CCC4)C3)cn2)cc1F
C28H33FN8O2
532.624000
WLGCCCLQJAMXCP-MUUNZHRXSA-N O96028, Q96L73, Q9BZ95 Histone-lysine N-methyltransferase NSD3, Histone-lysine N-methyltransferase NSD2, Histone-lysine N-methyltransferase, H3 lysine-36 specific
BindingDB, PubChem
BindingDB:BDBM567831; PubChem:CID156073361
Local ready
Direct docking supported
E3L027218
BDB027218
US11420970, Example 33
COC[C@@]1(N)CCCN(c2cnc(-c3ccc(OC)cc3F)cc2Cn2cnc3c(N)ncnc32)C1
C25H29FN8O2
492.559000
AOJRLTYJVMCYOE-RUZDIDTESA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM567832; PubChem:CID156073357
Local ready
Direct docking supported
E3L027219
BDB027219
US11420970, Example 34
CC(C)OC[C@@]1(N)CCCN(c2cnc(-c3ccc(F)c(F)c3)cc2Cn2cnc3c(N)ncnc32)C1
C26H30F2N8O
508.577000
SOJLHSBCIADIJS-AREMUKBSSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM567833; PubChem:CID156073359
Local ready
Direct docking supported
E3L027220
BDB027220
US11420970, Example 35
Nc1ncnc2c1ncn2Cc1cc(-c2cccc(F)c2)ncc1N1CCC[C@](N)(COC2CCC2)C1
C27H31FN8O
502.598000
NCRSKTPDDDOMPR-HHHXNRCGSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM567834; PubChem:CID156073358
Local ready
Direct docking supported