E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L030821
BDB030821
US20230287003, Example 12v
Cn1c(=O)c2c(c3cc(Nc4nc(N5C6CCC5COC6)ncc4Cl)ccc31)N[C@@H](C1CC1)C(F)(F)CO2
C26H27ClF2N6O3
544.990000
KFIPMJYXLUAZAW-LGHDPPOTSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618578; PubChem:CID155758474
Local ready
Direct docking supported
E3L030822
BDB030822
US20230287003, Example 12w
Cn1c(=O)c2c(c3cc(Nc4nc(N5C6CCC5CS(=O)(=O)C6)ncc4Cl)ccc31)N[C@@H](C1CC1)C(F)(F)CO2
C26H27ClF2N6O4S
593.056000
WMWBITVQOPIJBZ-LGHDPPOTSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618579; PubChem:CID155758505
Local ready
Direct docking supported
E3L030823
BDB030823
US20230287003, Example 12x
Cn1c(=O)c2c(c3cc(Nc4nc(N5CC(F)(F)C[C@@H]5CO)ncc4Cl)ccc31)N[C@@H](C1CC1)C(F)(F)CO2
C25H25ClF4N6O3
568.959000
GVDVDVLOGKOMGD-VLIAUNLRSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618580; PubChem:CID146188921
Local ready
Direct docking supported
E3L030824
BDB030824
US20230287003, Example 12y
Cn1c(=O)c2c(c3cc(Nc4nc(N5CCC(F)(F)[C@H](O)C5)ncc4Cl)ccc31)N[C@@H](C1CC1)CCO2
C25H27ClF2N6O3
532.979000
KWRHALBLLWUYTB-IEBWSBKVSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618581; PubChem:CID146188924
Local ready
Direct docking supported
E3L030825
BDB030825
US20230287003, Example 12z
Cn1c(=O)c2c(c3cc(Nc4nc(N5CCC(F)(F)[C@@H](O)C5)ncc4Cl)ccc31)N[C@@H](C1CC1)CCO2
C25H27ClF2N6O3
532.979000
KWRHALBLLWUYTB-MJGOQNOKSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618582; PubChem:CID146188923
Local ready
Direct docking supported
E3L030826
BDB030826
US20230287003, Example 13a
Cn1c(=O)c2c(c3cc(Nc4nc(N5CCc6ncnc(O)c6C5)ncc4Cl)ccc31)N[C@@H](C1CC1)C(F)(F)CO2
C27H25ClF2N8O3
582.999000
KPYVNYCXOZAGDA-QFIPXVFZSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618583; PubChem:CID146191452
Local ready
Direct docking supported
E3L030827
BDB030827
US20230287003, Example 13b
CN1C[C@H]2CC[C@@H](C1=O)N2c1ncc(Cl)c(Nc2ccc3c(c2)c2c(c(=O)n3C)OCC(F)(F)[C@H](C3CC3)N2)n1
C27H28ClF2N7O3
572.016000
KACAKRBWZOOOOO-MPHOGZCYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618584; PubChem:CID155758455
Local ready
Direct docking supported
E3L030828
BDB030828
US20230287003, Example 13c
CN(C)C(=O)C1CC2COCC(C1)N2c1ncc(Cl)c(Nc2ccc3c(c2)c2c(c(=O)n3C)OCC(F)(F)[C@H](C3CC3)N2)n1
C30H34ClF2N7O4
630.096000
GGLLDMHYYGFISQ-YIFGZVICSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618585; PubChem:CID156446840
Local ready
Direct docking supported
E3L030829
BDB030829
US20230287003, Example 13f
Cn1c(=O)c2c(c3cc(Nc4nc(N5CCN(CCC#N)CC5)ncc4Cl)ccc31)N[C@@H](C1CC1)C(F)(F)CO2
C27H29ClF2N8O2
571.032000
OAUOEZLIBDIYKL-QHCPKHFHSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618588; PubChem:CID146171970
Local ready
Direct docking supported
E3L030830
BDB030830
US20230287003, Example 13g
CN1CC2(C1)CN(c1ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC(F)(F)[C@H](C4CC4)N3)n1)C2
C26H28ClF2N7O2
544.006000
LCYULBARUCZMKJ-NRFANRHFSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618589; PubChem:CID155758490
Local ready
Direct docking supported
E3L030831
BDB030831
US20230287003, Example 13h
CN1CC2CC(C1)N2c1ncc(Cl)c(Nc2ccc3c(c2)c2c(c(=O)n3C)OCC(F)(F)[C@H](C3CC3)N2)n1
C26H28ClF2N7O2
544.006000
ASCSVZFERIVZDN-LGHDPPOTSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618590; PubChem:CID155758484
Local ready
Direct docking supported
E3L030832
BDB030832
US20230287003, Example 13i
CN1CCN(c2ncc(F)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC(F)(F)[C@H](C4CC4)N3)n2)CC1=O
C25H26F3N7O3
529.523000
YXHQGDGFJQHZNT-NRFANRHFSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618591; PubChem:CID146188801
Local ready
Direct docking supported
E3L030833
BDB030833
US20230287003, Example 13j
Cn1c(=O)c2c(c3cc(Nc4nc(N5C6CCC5COC6)ncc4F)ccc31)N[C@@H](C1CC1)C(F)(F)CO2
C26H27F3N6O3
528.535000
MDGCEMQEYUSFBL-LGHDPPOTSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618592; PubChem:CID155758481
Local ready
Direct docking supported
E3L030834
BDB030834
US20230287003, Example 14a
C[C@@H]1CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC[C@H](C4CC4)N3)n2)CCC1(F)F
C26H29ClF2N6O2
531.007000
RVDRGDGQDMGINA-AUUYWEPGSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618593; PubChem:CID146188791
Local ready
Direct docking supported
E3L030835
BDB030835
US20230287003, Example 15a
Cn1c(=O)c2c(c3cc(Nc4nc(N5C6COCC5CC(O)C6)ncc4Cl)ccc31)N[C@@H](C1CC1)CCS2
C27H31ClN6O3S
555.104000
IRYRJPYZIHFYTA-IPCIFYCFSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618595; PubChem:CID156446633
Local ready
Direct docking supported
E3L030836
BDB030836
US20230287003, Example 15b
Cn1c(=O)c2c(c3cc(Nc4nc(N5CCC(F)(F)[C@@H](CO)C5)ncc4Cl)ccc31)N[C@@H](C1CC1)CCO2
C26H29ClF2N6O3
547.006000
IDGNXOKFTMIDPJ-DNVCBOLYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618596; PubChem:CID146189017
Local ready
Direct docking supported
E3L030837
BDB030837
US20230287003, Example 15c
Cn1c(=O)c2c(c3cc(Nc4nc(N5CCC(F)(F)[C@H](CO)C5)ncc4Cl)ccc31)N[C@@H](C1CC1)CCO2
C26H29ClF2N6O3
547.006000
IDGNXOKFTMIDPJ-HNAYVOBHSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618597; PubChem:CID146189024
Local ready
Direct docking supported
E3L030838
BDB030838
US20230287003, Example 16a
C[C@@H]1CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4CCO)OCC[C@H](C4CC4)N3)n2)C[C@H](C)C1(F)F
C28H33ClF2N6O3
575.060000
CZGVITIIQIRYHK-VWKPWSFCSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618598; PubChem:CID146189129
Local ready
Direct docking supported
E3L030839
BDB030839
US20230287003, Example 17a
CNCCn1c(=O)c2c(c3cc(Nc4nc(N5C[C@@H](C)C(F)(F)[C@@H](C)C5)ncc4Cl)ccc31)N[C@@H](C1CC1)CCO2
C29H36ClF2N7O2
588.103000
UABSPYDKGBOWAQ-HYFFOGBASA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618599; PubChem:CID146189157
Local ready
Direct docking supported
E3L030840
BDB030840
US20230287003, Example 18a
CC1CNC(=O)c2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc3n(C)c2=O)N1
C20H17ClN6O2
408.849000
LCMPNVYSMTYYJE-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618600; PubChem:CID146171978
Local ready
Direct docking supported