E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L030801
BDB030801
US20230287003, Example 11c
Cn1c(=O)c2c(c3cc(Nc4nc(N5C6COCC5CC(O)C6)ncc4Cl)ccc31)N[C@@H](C1CC1)C(F)(F)CO2
C27H29ClF2N6O4
575.016000
NSEFNIYZBRIBKB-WHZSGRLBSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618556; PubChem:CID156446631
Local ready
Direct docking supported
E3L030802
BDB030802
US20230287003, Example 12a
CN1CCN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC(F)(F)[C@H](C4CC4)N3)n2)CC1=O
C25H26ClF2N7O3
545.978000
AVTFRNCFURGCIU-NRFANRHFSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618557; PubChem:CID146172171
Local ready
Direct docking supported
E3L030803
BDB030803
US20230287003, Example 12b
CN1CCN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC[C@H](C4CC4)N3)n2)CC1=O
C25H28ClN7O3
509.998000
GQODFMTVMVIGJY-GOSISDBHSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618558; PubChem:CID146188800
Local ready
Direct docking supported
E3L030804
BDB030804
US20230287003, Example 12c
C[C@H]1C[C@@H](O)CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC[C@H](C4CC4)N3)n2)C1
C26H31ClN6O3
511.026000
DDHFQAJUMDBOQA-JNAXZKDPSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618559; PubChem:CID146191456
Local ready
Direct docking supported
E3L030805
BDB030805
US20230287003, Example 12d
C[C@@H]1C[C@H](O)CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC[C@H](C4CC4)N3)n2)C1
C26H31ClN6O3
511.026000
DDHFQAJUMDBOQA-CFLQYTFWSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618560; PubChem:CID146191455
Local ready
Direct docking supported
E3L030806
BDB030806
BDBM618561
C[C@@H]1CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC[C@H](C4CC4)N3)n2)C[C@H](C)[C@H]1F
C27H32ClFN6O2
527.044000
KAWLNDMLHKUWFZ-ZUVUYASXSA-N P41182 B-cell lymphoma 6 protein
BindingDB
BindingDB:BDBM618561
Local ready
Direct docking supported
E3L030807
BDB030807
US20230287003, Example 12f
Cn1c(=O)c2c(c3cc(Nc4nc(N5C6CCC5CC(O)C6)ncc4Cl)ccc31)N[C@@H](C1CC1)CCO2
C27H31ClN6O3
523.037000
FPBPHPUEWGYORG-IPCIFYCFSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618562; PubChem:CID156446622
Local ready
Direct docking supported
E3L030808
BDB030808
US20230287003, Example 12g
Cn1c(=O)c2c(c3cc(Nc4nc(N5CC6CCC(C5)O6)ncc4Cl)ccc31)N[C@@H](C1CC1)CCO2
C26H29ClN6O3
509.010000
HQJKNYOHDNPVMR-LBXVMSDZSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618563; PubChem:CID155758459
Local ready
Direct docking supported
E3L030809
BDB030809
US20230287003, Example 12h
Cn1c(=O)c2c(c3cc(Nc4nc(N5C6COCC5CC(C)(O)C6)ncc4Cl)ccc31)N[C@@H](C1CC1)CCO2
C28H33ClN6O4
553.063000
ZOSZBQMGWVSNKO-YTVCEIKBSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618564; PubChem:CID156446807
Local ready
Direct docking supported
E3L030810
BDB030810
US20230287003, Example 12i
CN1CC2CCC(C1)N2c1ncc(Cl)c(Nc2ccc3c(c2)c2c(c(=O)n3C)OCC[C@H](C3CC3)N2)n1
C27H32ClN7O2
522.053000
COCOGHVPCVOPDZ-WIXQSORDSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618565; PubChem:CID155758516
Local ready
Direct docking supported
E3L030811
BDB030811
US20230287003, Example 12j
Cn1c(=O)c2c(c3cc(Nc4nc(N5C6CCC5CS(=O)(=O)C6)ncc4Cl)ccc31)N[C@@H](C1CC1)CCO2
C26H29ClN6O4S
557.076000
SFWVVMFZNVOYLK-LBXVMSDZSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618566; PubChem:CID155758475
Local ready
Direct docking supported
E3L030812
BDB030812
US20230287003, Example 12k
C[C@H]1C[C@@H](O)CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC[C@H](C)N3)n2)C1
C24H29ClN6O3
484.988000
YDIDKCWGTRFWSR-OFQRWUPVSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618567; PubChem:CID146188804
Local ready
Direct docking supported
E3L030813
BDB030813
US20230287003, Example 12l
C[C@@H]1C[C@H](O)CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC[C@H](C)N3)n2)C1
C24H29ClN6O3
484.988000
YDIDKCWGTRFWSR-YCPHGPKFSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618568; PubChem:CID146188802
Local ready
Direct docking supported
E3L030814
BDB030814
US20230287003, Example 12m
C[C@@H]1CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)SCC[C@H](C4CC4)N3)n2)C[C@H](C)C1(F)F
C27H31ClF2N6OS
561.102000
HGIIOSISILPQAD-QEEYODRMSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618569; PubChem:CID146188806
Local ready
Direct docking supported
E3L030815
BDB030815
US20230287003, Example 12n
Cn1c(=O)c2c(c3cc(Nc4nc(N5CCC(F)(F)CC5)ncc4Cl)ccc31)N[C@@H](C1CC1)C(F)(F)CO2
C25H25ClF4N6O2
552.960000
YXGAJCFHKVEACQ-FQEVSTJZSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618570; PubChem:CID146189155
Local ready
Direct docking supported
E3L030816
BDB030816
US20230287003, Example 12o
C[C@@H]1CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC(F)(F)[C@H](C4CC4)N3)n2)C[C@H](C)C1(F)F
C27H29ClF4N6O2
581.014000
LIORIGGJFLCQGB-VVYDWRJNSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618571; PubChem:CID146189154
Local ready
Direct docking supported
E3L030817
BDB030817
US20230287003, Example 12r
Cn1c(=O)c2c(c3cc(Nc4nc(N5CCOCC5)ncc4Cl)ccc31)N[C@@H](C1CC1)C(F)(F)CO2
C24H25ClF2N6O3
518.952000
CZTGBCYDMXHKOW-FQEVSTJZSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618574; PubChem:CID146188911
Local ready
Direct docking supported
E3L030818
BDB030818
US20230287003, Example 12s
C[C@@H]1CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC(F)(F)[C@H](C4CC4)N3)n2)CCO1
C25H27ClF2N6O3
532.979000
VRIQLBRKCSERAI-ASSNKEHSSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618575; PubChem:CID146188912
Local ready
Direct docking supported
E3L030819
BDB030819
US20230287003, Example 12t
C[C@H]1CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC(F)(F)[C@H](C4CC4)N3)n2)CCO1
C25H27ClF2N6O3
532.979000
VRIQLBRKCSERAI-ZSEKCTLFSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618576; PubChem:CID146188909
Local ready
Direct docking supported
E3L030820
BDB030820
US20230287003, Example 12u
Cn1c(=O)c2c(c3cc(Nc4nc(N5CC6CCC(C5)O6)ncc4Cl)ccc31)N[C@@H](C1CC1)C(F)(F)CO2
C26H27ClF2N6O3
544.990000
ZXOPHZQDWCEBMO-LGHDPPOTSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618577; PubChem:CID155758515
Local ready
Direct docking supported