E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L030761
BDB030761
US20230287003, Example 5e
C[C@@H]1C[C@H](C)CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC[C@H](C)N3)n2)C1
C25H31ClN6O2
483.016000
GBQOVQPPXYZTII-XHSDSOJGSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618512; PubChem:CID146188917
Local ready
Direct docking supported
E3L030762
BDB030762
US20230287003, Example 5f
C[C@@H]1CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC[C@H](C)N3)n2)C[C@H](C)C1(F)F
C25H29ClF2N6O2
518.996000
ZIFZHHBTOJXPBZ-ZNMIVQPWSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618513; PubChem:CID146188795
Local ready
Direct docking supported
E3L030763
BDB030763
US20230287003, Example 5g
C[C@@H]1CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC[C@H](C)N3)n2)C[C@H](C)O1
C24H29ClN6O3
484.988000
BKMNVUHBMKPFBE-SOUVJXGZSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618514; PubChem:CID146188797
Local ready
Direct docking supported
E3L030764
BDB030764
US20230287003, Example 5h
C[C@H]1CCOc2c(c3cc(Nc4nc(N5CCOCC5)ncc4Cl)ccc3n(C)c2=O)N1
C22H25ClN6O3
456.934000
JOBAAVWNGDEMOC-ZDUSSCGKSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618515; PubChem:CID146188798
Local ready
Direct docking supported
E3L030765
BDB030765
US20230287003, Example 5i
C[C@@H]1CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC[C@H](C4CC4)N3)n2)C[C@H](C)C1(F)F
C27H31ClF2N6O2
545.034000
BSLSPGIGUKGBAJ-QEEYODRMSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618516; PubChem:CID146188796
Local ready
Direct docking supported
E3L030766
BDB030766
US20230287003, Example 5j
Cn1c(=O)c2c(c3cc(Nc4nc(-n5ccc(C(F)(F)F)n5)ncc4Cl)ccc31)NC1(CCOC1)CCO2
C24H21ClF3N7O3
547.925000
OGJXSNBNRIZEDC-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618517; PubChem:CID146189002
Local ready
Direct docking supported
E3L030767
BDB030767
US20230287003, Example 5k
Cn1c(=O)c2c(c3cc(Nc4nc(N5CC(C)(C)OC(C)(C)C5)ncc4Cl)ccc31)N[C@@H](C1CC1)CCO2
C28H35ClN6O3
539.080000
XIJLWBJGXUJUKZ-HXUWFJFHSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618518; PubChem:CID146189001
Local ready
Direct docking supported
E3L030768
BDB030768
US20230287003, Example 5l
Cn1c(=O)c2c(c3cc(Nc4nc(N5C6CCC5COC6)ncc4Cl)ccc31)N[C@@H](C1CC1)CCO2
C26H29ClN6O3
509.010000
GAFXVUIXDUUGSB-LBXVMSDZSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618519; PubChem:CID155758458
Local ready
Direct docking supported
E3L030769
BDB030769
US20230287003, Example 5m
Cn1c(=O)c2c(c3cc(Nc4nc(N5CCC(F)(F)CC5)ncc4Cl)ccc31)N[C@@H](C1CC1)CCO2
C25H27ClF2N6O2
516.980000
AUQNLRGZJCFWJO-GOSISDBHSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618520; PubChem:CID146189003
Local ready
Direct docking supported
E3L030770
BDB030770
US20230287003, Example 5n
Cn1c(=O)c2c(c3cc(Nc4nc(N5C6COCC5CC(O)C6)ncc4Cl)ccc31)N[C@@H](C1CC1)CCO2
C27H31ClN6O4
539.036000
FTTJEPVSWFBSCH-IPCIFYCFSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618521; PubChem:CID156446993
Local ready
Direct docking supported
E3L030771
BDB030771
US20230287003, Example 5o
Cn1c(=O)c2c(c3cc(Nc4nc(N5C6CC7CC5CC(C6)O7)ncc4Cl)ccc31)N[C@@H](C1CC1)CCO2
C28H31ClN6O3
535.048000
NEEMYNSXVCXOGY-HCKJTYGLSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618522; PubChem:CID155758471
Local ready
Direct docking supported
E3L030772
BDB030772
BDBM618523
C[C@@H]1CN(c2ncc(Cl)c(Nc3ccc4[nH]c(=O)c5c(c4c3)N[C@@H](C3CC3)CCO5)n2)C[C@H](C)C1(F)F
C26H29ClF2N6O2
531.007000
BWLSKWSLDOCVKY-BIENJYKASA-N P41182 B-cell lymphoma 6 protein
BindingDB
BindingDB:BDBM618523
Local ready
Direct docking supported
E3L030773
BDB030773
US20230287003, Example 5q
O=c1c2c(c3cc(Nc4nc(N5C6CCC5COC6)ncc4Cl)ccc3n1CC1CC(F)(F)C1)N[C@@H](C1CC1)CCO2
C30H33ClF2N6O3
599.082000
APLVQISBZUZQSY-YABDQXBESA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618524; PubChem:CID155758487
Local ready
Direct docking supported
E3L030774
BDB030774
US20230287003, Example 5r
O=c1c2c(c3cc(Nc4nc(N5C6CCC5COC6)ncc4Cl)ccc3n1CC1CC1)N[C@@H](C1CC1)CCO2
C29H33ClN6O3
549.075000
QCWAFZVZRUHDNF-YABDQXBESA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618525; PubChem:CID155758510
Local ready
Direct docking supported
E3L030775
BDB030775
US20230287003, Example 5s
Cn1c(=O)c2c(c3cc(Nc4nc(N5CCC(F)(F)CC5)ncc4Cl)cnc31)N[C@@H](C1CC1)CCO2
C24H26ClF2N7O2
517.968000
JCHBBUPMUXGMQG-QGZVFWFLSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618526; PubChem:CID146191443
Local ready
Direct docking supported
E3L030776
BDB030776
US20230287003, Example 5t
C[C@@H]1CN(c2ncc(Cl)c(Nc3cnc4c(c3)c3c(c(=O)n4C)OCC[C@H](C4CC4)N3)n2)C[C@H](C)C1(F)F
C26H30ClF2N7O2
546.022000
ZKRZHGBALCCYBD-BIENJYKASA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618527; PubChem:CID146189138
Local ready
Direct docking supported
E3L030777
BDB030777
US20230287003, Example 5u
O=c1c2c(c3cc(Nc4nc(N5C6COCC5CC(O)C6)ncc4Cl)ccc3n1CC1CC(F)(F)C1)N[C@@H](C1CC1)CCO2
C31H35ClF2N6O4
629.108000
WJNBUCPPEQXGRP-KGQZTBJRSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618528; PubChem:CID161522324
Local ready
Direct docking supported
E3L030778
BDB030778
US20230287003, Example 6c
Cn1c(=O)c2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc31)NC(C1CC1)COC2=O
C22H18ClN5O3
435.871000
JSQHTIYVSFGCAP-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618531; PubChem:CID146172002
Local ready
Direct docking supported
E3L030779
BDB030779
US20230287003, Example 6d
CC1COc2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc3n(C)c2=O)NC1C
C21H20ClN5O2
409.877000
DYQXNLMRMNQUHY-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618532; PubChem:CID156446624
Local ready
Direct docking supported
E3L030780
BDB030780
US20230287003, Example 7a
C[C@H]1COC(=O)c2c(c3cc(Nc4cc(OC5CCOCC5)ncc4Cl)ccc3n(C)c2=O)N1
C24H25ClN4O5
484.940000
OZAZBXVOUBSOBS-ZDUSSCGKSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618533; PubChem:CID146189144
Local ready
Direct docking supported