E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L030781
BDB030781
US20230287003, Example 8a
C[C@@H]1CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)C(=O)OC[C@H](C)N3)n2)C[C@H](C)O1
C24H27ClN6O4
498.971000
UZZTWNYIJHPZLW-MELADBBJSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618534; PubChem:CID146189147
Local ready
Direct docking supported
E3L030782
BDB030782
US20230287003, Example 8b
C[C@H]1COC(=O)c2c(c3cc(Nc4nc(N5C6CCCC5CC6)ncc4Cl)ccc3n(C)c2=O)N1
C25H27ClN6O3
494.983000
IGPHVZZJDJWZSD-JEYLPNPQSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618535; PubChem:CID155758462
Local ready
Direct docking supported
E3L030783
BDB030783
US20230287003, Example 8c
C[C@@H]1CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)C(=O)OC[C@H](C)N3)n2)C[C@H](C)C1(F)F
C25H27ClF2N6O3
532.979000
PLERCLFIBHWYNA-MJBXVCDLSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618536; PubChem:CID146189146
Local ready
Direct docking supported
E3L030784
BDB030784
US20230287003, Example 8d
C[C@H]1COC(=O)c2c(c3cc(Nc4nc(N5CCC(C(=O)N(C)C)CC5)ncc4Cl)ccc3n(C)c2=O)N1
C26H30ClN7O4
540.024000
NHOSQUKEKAJEBF-AWEZNQCLSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618537; PubChem:CID146189143
Local ready
Direct docking supported
E3L030785
BDB030785
US20230287003, Example 8e
C[C@H]1COC(=O)c2c(c3cc(Nc4nc(N5CCC6(CCCN(C)C6=O)CC5)ncc4Cl)ccc3n(C)c2=O)N1
C28H32ClN7O4
566.062000
UVYIUSWAAZEHHH-INIZCTEOSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618538; PubChem:CID146189145
Local ready
Direct docking supported
E3L030786
BDB030786
US20230287003, Example 8f
C[C@H]1COC(=O)c2c(c3cc(Nc4nc(N5C6CCC5CC(F)(F)C6)ncc4Cl)ccc3n(C)c2=O)N1
C25H25ClF2N6O3
530.963000
AWHXMEGMUPCBJU-GRTSSRMGSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618539; PubChem:CID155758482
Local ready
Direct docking supported
E3L030787
BDB030787
US20230287003, Example 8g
C[C@@H]1C[C@H](C)CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)C(=O)OC[C@H](C)N3)n2)C1
C25H29ClN6O3
496.999000
FPNKBPZHTPNXEM-ZNMIVQPWSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618540; PubChem:CID146189153
Local ready
Direct docking supported
E3L030788
BDB030788
US20230287003, Example 8h
C[C@H]1COC(=O)c2c(c3cc(Nc4nc(N5CC6CCC(C6)C5)ncc4Cl)ccc3n(C)c2=O)N1
C25H27ClN6O3
494.983000
BILQWJFJDDXVDP-NFOMZHRRSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618541; PubChem:CID155758499
Local ready
Direct docking supported
E3L030789
BDB030789
US20230287003, Example 8i
C[C@H]1COC(=O)c2c(c3cc(Nc4nc(N5CCCC5=O)ncc4Cl)ccc3n(C)c2=O)N1
C22H21ClN6O4
468.901000
RCUNVYQCZJUJKX-NSHDSACASA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618542; PubChem:CID146191446
Local ready
Direct docking supported
E3L030790
BDB030790
US20230287003, Example 8j
Cn1c(=O)c2c(c3cc(Nc4nc(N5C6CCCC5CC6)ncc4Cl)ccc31)N[C@@H](C1CC1)COC2=O
C27H29ClN6O3
521.021000
FFZMGRMXMOBMIA-LBXVMSDZSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618543; PubChem:CID155758506
Local ready
Direct docking supported
E3L030791
BDB030791
US20230287003, Example 8k
C[C@@H]1CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)C(=O)OC[C@H](C4CC4)N3)n2)C[C@H](C)C1(F)F
C27H29ClF2N6O3
559.017000
CEWSBUGSOKMPQT-BIENJYKASA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618544; PubChem:CID146189010
Local ready
Direct docking supported
E3L030792
BDB030792
US20230287003, Example 8l
C[C@@H]1C[C@H](C)CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)C(=O)OC[C@H](C4CC4)N3)n2)C1
C27H31ClN6O3
523.037000
HGTZMNSLVZHARP-QEEYODRMSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618545; PubChem:CID146189011
Local ready
Direct docking supported
E3L030793
BDB030793
US20230287003, Example 8m
CN(C)C(=O)C1CCN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)C(=O)OC[C@H](C4CC4)N3)n2)CC1
C28H32ClN7O4
566.062000
PTIUUUVOEBQPGL-HXUWFJFHSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618546; PubChem:CID146189009
Local ready
Direct docking supported
E3L030794
BDB030794
US20230287003, Example 8n
C[C@@H]1CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)C(=O)OC[C@H](C4CC4)N3)n2)C[C@H](C)O1
C26H29ClN6O4
525.009000
YMIQPGWJOPZOOI-BIENJYKASA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618547; PubChem:CID146189012
Local ready
Direct docking supported
E3L030795
BDB030795
US20230287003, Example 8o
Cn1c(=O)c2c(c3cc(Nc4nc(N5CCC(F)(F)CC5)ncc4Cl)ccc31)NC(C1CC1)COC2=O
C25H25ClF2N6O3
530.963000
UGTZMOWIYMDZOC-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618548; PubChem:CID146189013
Local ready
Direct docking supported
E3L030796
BDB030796
US20230287003, Example 8p
CC1Nc2c(c(=O)n(C)c3ccc(Nc4nc(N5C[C@H](C)C[C@H](C)C5)ncc4Cl)cc23)C(=O)OC1C
C26H31ClN6O3
511.026000
GBNFKHJMZCAAGH-PJPHBNEVSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618549; PubChem:CID146189015
Local ready
Direct docking supported
E3L030797
BDB030797
US20230287003, Example 9b
Cn1c(=O)c2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc31)N[C@@H](C1CC1)COC2
C22H20ClN5O2
421.888000
MYQSMSWPGDQOJS-GOSISDBHSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618552; PubChem:CID146172128
Local ready
Direct docking supported
E3L030798
BDB030798
US20230287003, Example 10a
CC1CCc2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc3n(C)c2=O)N1
C20H18ClN5O
379.851000
MAWKLVJDUIOOTD-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618553; PubChem:CID146189007
Local ready
Direct docking supported
E3L030799
BDB030799
US20230287003, Example 11a
Cn1c(=O)c2c(c3cc(Nc4nc(N5C6COCC5CC(O)C6)ncc4Cl)ccc31)NC(C1CC1)C(F)(F)CO2
C27H29ClF2N6O4
575.016000
NSEFNIYZBRIBKB-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618554; PubChem:CID156446457
Local ready
Direct docking supported
E3L030800
BDB030800
US20230287003, Example 11b
Cn1c(=O)c2c(c3cc(Nc4nc(N5C6COCC5CC(O)C6)ncc4Cl)cnc31)N[C@@H](C1CC1)CCO2
C26H30ClN7O4
540.024000
SMMYIAMLVANUEI-VLPJLJSLSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618555; PubChem:CID160876885
Local ready
Direct docking supported