E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L031381
BDB031381
BDBM628448
O=C(NC1CC1)c1ccc(N2CCN(Cc3ccc4c5c(c(=O)[nH]c4c3F)CCO5)CC2)c(F)n1
C25H25F2N5O3
481.503000
CNUNWROOUGSSPD-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM628448; PubChem:CID169302775
Local ready
Direct docking supported
E3L031382
BDB031382
BDBM628449
COCCNC(=O)c1ccc(N2CCN(Cc3ccc4c([nH]c(=O)c5cc(C)nn54)c3F)CC2)c(F)n1
C25H27F2N7O3
511.533000
FDLJUNIACZSCRA-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM628449; PubChem:CID169302793
Local ready
Direct docking supported
E3L031383
BDB031383
BDBM628451
CNC(=O)c1ccc(N2CCN(Cc3ccc4c([nH]c(=O)c5cnn(C)c54)c3F)CC2)c(F)n1
C23H23F2N7O2
467.480000
WMCXYGMSZGSRSX-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM628451; PubChem:CID169266058
Local ready
Direct docking supported
E3L031384
BDB031384
BDBM628452
CNC(=O)c1ccc(N2CCN(Cc3ccc4c([nH]c(=O)c5cn(C)nc54)c3F)CC2)c(F)n1
C23H23F2N7O2
467.480000
DMCFXPWFPIARHS-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM628452; PubChem:CID169302813
Local ready
Direct docking supported
E3L031385
BDB031385
BDBM628453
Cc1cc2c(=O)[nH]c3c(F)c(CN4CCN(c5ccc(C(=O)NC6COC6)nc5F)CC4)ccc3n2n1
C25H25F2N7O3
509.517000
VIXQNDCTGVZIBY-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM628453; PubChem:CID169302818
Local ready
Direct docking supported
E3L031386
BDB031386
BDBM628455
CNC(=O)c1ccc(N2CCN(Cc3ccc4c([nH]c(=O)c5c(C)cnn54)c3F)CC2)c(F)n1
C23H23F2N7O2
467.480000
VOXDXGKKLKJKPE-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM628455; PubChem:CID169302760
Local ready
Direct docking supported
E3L031387
BDB031387
BDBM628457
CNC(=O)c1ccc(N2CCN(Cc3ccc4c([nH]c(=O)c5cc(F)nn54)c3F)CC2)c(F)n1
C22H20F3N7O2
471.443000
UJEBNVGXCPGTSD-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM628457; PubChem:CID169302811
Local ready
Direct docking supported
E3L031388
BDB031388
BDBM628458
CNC(=O)c1ccc(N2CCN(Cc3ccc4c5c(c(=O)[nH]c4c3F)CCO5)CC2)cn1
C23H24FN5O3
437.475000
UONZOBZSQBYRIU-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM628458; PubChem:CID169302782
Local ready
Direct docking supported
E3L031389
BDB031389
BDBM628459
CNC(=O)c1nc(C)c(N2CCN(Cc3ccc4c5c(c(=O)[nH]c4c3F)CCO5)CC2)cc1F
C24H25F2N5O3
469.492000
FZTJJDIFJNMSTD-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM628459; PubChem:CID169302786
Local ready
Direct docking supported
E3L031390
BDB031390
BDBM628460
CNC(=O)c1ccc(N2CCN(Cc3ccc4c([nH]c(=O)c5c(F)cnn54)c3F)CC2)c(F)n1
C22H20F3N7O2
471.443000
PMIVWECZXHTRTB-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM628460; PubChem:CID169302792
Local ready
Direct docking supported
E3L031391
BDB031391
BDBM628461
CNC(=O)c1ccc(N2CCN(Cc3ccc4c5c(c(=O)[nH]c4c3F)CCO5)CC2)c(C)n1
C24H26FN5O3
451.502000
LPVVVEXJDPQYDO-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM628461; PubChem:CID169302777
Local ready
Direct docking supported
E3L031392
BDB031392
US20250215013, Example 44
CNC(=O)c1ccc(N2CCN(Cc3ccc4c([nH]c(=O)c5ccoc54)c3F)CC2)c(F)n1
C23H21F2N5O3
453.449000
IXGZNTGACBFAFA-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM628462; PubChem:CID169302803
Local ready
Direct docking supported
E3L031393
BDB031393
BDBM628467
CNC(=O)c1ccc(N2CCN(Cc3ccc4c5c(c(=O)[nH]c4c3)CCO5)CC2)c(C)n1
C24H27N5O3
433.512000
NHPQRZAGGNPICW-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM628467; PubChem:CID169302763
Local ready
Direct docking supported
E3L031394
BDB031394
BDBM628468
CNC(=O)c1ccc(N2CCN(Cc3ccc4c5c(c(=O)[nH]c4c3)CCO5)CC2)c(Cl)n1
C23H24ClN5O3
453.930000
GMZOBKRTNVOMBN-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM628468; PubChem:CID169302749
Local ready
Direct docking supported
E3L031395
BDB031395
BDBM628469
CNC(=O)c1ccc(N2CCN(Cc3cc(F)c4c5c(c(=O)[nH]c4c3)COC5)CC2)c(F)n1
C23H23F2N5O3
455.465000
OBJSKDSGSDZNFH-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM628469; PubChem:CID169302816
Local ready
Direct docking supported
E3L031396
BDB031396
BDBM628470
CNC(=O)c1ccc(N2CCN(Cc3ccc4c5c(c(=O)[nH]c4c3F)CCC5)CC2)c(F)n1
C24H25F2N5O2
453.493000
JDACCOZWGFBPHL-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM628470; PubChem:CID168982748
Local ready
Direct docking supported
E3L031397
BDB031397
US10544132, Example 6
C[C@@H](c1ccc(Cl)cc1)N1C(=O)c2cc(C(C)(C)O)ccc2[C@]1(OCC(C)(O)CO)c1ccc(Cl)cc1
C29H31Cl2NO5
544.475000
UUZINBSIYDKSFT-PDIMESBLSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM628476; PubChem:CID135281509
Local ready
Direct docking supported
E3L031398
BDB031398
US20230338337, Example 24
CC1CC1(O)[C@@]1(c2ccc(Cl)cc2)c2c(F)cc(C(C)(C)O)cc2C(=O)N1Cc1ccc(C#N)cc1
C29H26ClFN2O3
504.989000
OSKAYFGMQNOSFH-YWYJHBEMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM628501; PubChem:CID172636746
Local ready
Direct docking supported
E3L031399
BDB031399
US20230338337, Example 36
CC1CC1(O)[C@@]1(c2ccc(Cl)cc2)c2ccc(C(C)(C)O)cc2C(=O)N1Cc1ccc(Cl)cc1S(C)(=O)=O
C29H29Cl2NO5S
574.526000
CAFDLQJHZSTDLQ-YWYJHBEMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM628563; PubChem:CID172636747
Local ready
Direct docking supported
E3L031400
BDB031400
US20230338337, Example 45
C[C@@H](c1ccc(Cl)cc1)N1C(=O)c2cc(C(C)(C)O)ccc2[C@]1(O[C@H]1COC[C@H]1O)c1ccc(Cl)cc1
C29H29Cl2NO5
542.459000
JLJRDOGQKDSPHW-QOSCSMRQSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM628570; PubChem:CID135281439
Local ready
Direct docking supported