E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L033881
BDB033881
US12012467, Example 165
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]1CCOc2cc(Cl)ccc21)C1CCCC1
C38H48ClN5O5
690.285000
VKKJFAJCKVRCTQ-MZZRCDJFSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680941; PubChem:CID142442794
Local ready
Direct docking supported
E3L033882
BDB033882
US12012467, Example 166
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]1CCOc2c(Cl)cccc21)C1CCCC1
C38H48ClN5O5
690.285000
LBXNRDWOVRONRR-AZWAZIRRSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680942; PubChem:CID171991095
Local ready
Direct docking supported
E3L033883
BDB033883
US12012467, Example 167
CC[C@H](C)[C@H](NC(=O)[C@H](Cc1ccc2ccccc2c1)NC(=O)[C@@H](C)O)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CC(C)C)C(N)=O
C34H52N6O6
640.826000
LRHPIBRIMFIJMI-UXRPLMFVSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680943; PubChem:CID148398225
Local ready
Direct docking supported
E3L033884
BDB033884
US12012467, Example 168
CC[C@H](C)[C@H](NC(=O)[C@H](Cc1ccc2ccccc2c1)NC(=O)[C@H](C)O)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CC(C)C)C(N)=O
C34H52N6O6
640.826000
LRHPIBRIMFIJMI-TZGTVAASSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680944; PubChem:CID171991096
Local ready
Direct docking supported
E3L033885
BDB033885
US12012467, Example 171
CCC(=O)N[C@@H](Cc1nc2ccc(Cl)cc2s1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]1CCOc2cc(Cl)ccc21)C1CCCC1
C35H44Cl2N6O5S
731.747000
NKZKAGLJWSBSCW-SARPRWNPSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680947; PubChem:CID163808295
Local ready
Direct docking supported
E3L033886
BDB033886
US12012467, Example 173
CCC(=O)N[C@@H](Cc1nc2ccc(C)cc2s1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)NC(c1ccccc1)c1ccccc1)C1CCCC1
C40H50N6O4S
710.945000
IMHRDFZMNFCYGQ-WXLVEAMESA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680948; PubChem:CID142442541
Local ready
Direct docking supported
E3L033887
BDB033887
US12012467, Example 174
CCC(=O)N[C@@H](Cc1nc2ccc(CC)cc2s1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)NC(c1ccccc1)c1ccccc1)C1CCCC1
C41H52N6O4S
724.972000
OZZGRILNDKKTAO-VRCSSVMSSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680949; PubChem:CID171991097
Local ready
Direct docking supported
E3L033888
BDB033888
US12012467, Example 31
CCC(=O)N[C@@H](Cc1nc2cccc(Cl)c2s1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)NC(c1ccccc1)c1ccccc1)C1CCCC1
C39H47ClN6O4S
731.363000
JPIQEINYIQFYOW-WQDXIGEJSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680950; PubChem:CID142442554
Local ready
Direct docking supported
E3L033889
BDB033889
US12012467, Example 175
CCC(=O)N[C@@H](Cc1nc2ccc(C)cc2s1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]1CCOc2ccccc21)C1CCCC1
C36H48N6O5S
676.884000
ITBCMGKWDLYBMY-AKXFVFQISA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680951; PubChem:CID171991098
Local ready
Direct docking supported
E3L033890
BDB033890
US12012467, Example 176
CCC(=O)N[C@@H](Cc1nc2ccc(CC)cc2s1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]1CCOc2ccccc21)C1CCCC1
C37H50N6O5S
690.911000
JTJKLADNBCHPSL-NCCYANEESA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680952; PubChem:CID171991099
Local ready
Direct docking supported
E3L033891
BDB033891
US12012467, Example 177
CCC(=O)N[C@@H](Cc1nc2ccc(CC)cc2s1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]1CNCc2ccccc21)C1CCCC1
C37H51N7O4S
689.927000
CAJWFSDEFDYYIN-IANDGLOUSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680954; PubChem:CID142442524
Local ready
Direct docking supported
E3L033892
BDB033892
US12012467, Example 178
CCC(=O)N[C@@H](Cc1nc2ccc(C)cc2s1)C(=O)N[C@@H](CC1CCNCC1)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]1CCOc2ccccc21
C37H51N7O5S
705.926000
QIXNGVHALIDVRA-ZRJFKUPHSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680955; PubChem:CID171991100
Local ready
Direct docking supported
E3L033893
BDB033893
US12012467, Example 179
CCC(=O)N[C@@H](Cc1nc2ccc(C)cc2s1)C(=O)N[C@@H](Cc1ccccn1)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]1CCOc2ccccc21
C37H45N7O5S
699.878000
LNYZBKQVQIGVKA-ZRJFKUPHSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680956; PubChem:CID142442734
Local ready
Direct docking supported
E3L033894
BDB033894
US12012467, Example 180
CCC(=O)N[C@@H](Cc1nc2ccc(C)cc2s1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]1CCOc2ccccc21)C1CCNCC1
C36H49N7O5S
691.899000
ORDWHOGZNUTIPM-AKXFVFQISA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680957; PubChem:CID142442824
Local ready
Direct docking supported
E3L033895
BDB033895
US12012467, Example 181
CCC(=O)N[C@@H](Cc1nc2ccc(C)cc2s1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]1CCOc2ccccc21)C1CCOCC1
C36H48N6O6S
692.883000
NRUBKEQUHQMSAL-AKXFVFQISA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680958; PubChem:CID171991101
Local ready
Direct docking supported
E3L033896
BDB033896
US12012467, Example 182
CCC(=O)N[C@@H](Cc1nc2ccc(C)cc2s1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]1CCOc2ccccc21)C(C)(C)O
C34H46N6O6S
666.845000
SGXQRXMKTLZKNK-AIUIFLDSSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680959; PubChem:CID142442369
Local ready
Direct docking supported
E3L033897
BDB033897
US12012467, Example 183
CCC(=O)N[C@@H](Cc1nc2ccc(C)cc2s1)C(=O)N[C@@H](Cc1cccnc1)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]1CCOc2ccccc21
C37H45N7O5S
699.878000
VNOXRNVBPXFTEI-ZRJFKUPHSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680960; PubChem:CID142442510
Local ready
Direct docking supported
E3L033898
BDB033898
US12012467, Example 184
CCC(=O)N[C@@H](Cc1nc2ccc(C)cc2s1)C(=O)N[C@@H](Cc1ccncc1)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]1CCOc2ccccc21
C37H45N7O5S
699.878000
LYHVVSTWMIHUNG-ZRJFKUPHSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680961; PubChem:CID171991102
Local ready
Direct docking supported
E3L033899
BDB033899
BDBM680962
CCC(=O)N[C@@H](Cc1nc2ccc(C)cc2s1)C(=O)N[C@@H](C[C@H]1CC[C@H](CN)CC1)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]1CCOc2ccccc21
C39H55N7O5S
733.980000
ZZEDHPWNPYUNJT-FGVZHGLYSA-N Q96GG9 DCN1-like protein 1
BindingDB
BindingDB:BDBM680962
Local ready
Direct docking supported
E3L033900
BDB033900
US12012467, Example 186
CCC(=O)N[C@@H](Cc1nc2ccc(CC)cc2s1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]1CCOc2ccccc21)C1CCOCC1
C37H50N6O6S
706.910000
TYTSBIBMVCJKKL-NCCYANEESA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680964; PubChem:CID142442582
Local ready
Direct docking supported