E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L033861
BDB033861
US12012467, Example 147
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCNC1CCN(C)CC1)C(=O)NC(c1ccccc1)c1ccccc1)C1CCCC1
C48H62N6O4
787.062000
FOTWKYWTONMZAL-WRQZLFHVSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680913; PubChem:CID171991089
Local ready
Direct docking supported
E3L033862
BDB033862
US12012467, Example 148
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]1CCCc2ccccc21)C1CCCC1
C39H51N5O4
653.868000
JJXWJABJSJZWCP-FGUMVENWSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680914; PubChem:CID171991090
Local ready
Direct docking supported
E3L033863
BDB033863
US12012467, Example 149
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]1CCOc2ccccc21)C1CCCC1
C38H49N5O5
655.840000
ZVBDRPAVIOZLKX-MZZRCDJFSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680915; PubChem:CID164170665
Local ready
Direct docking supported
E3L033864
BDB033864
US12012467, Example 150
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@H](CN)c1ccccc1)C1CCCC1
C37H50N6O4
642.845000
ZMGYROQRVKSWRL-SGLIHVKSSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680916; PubChem:CID164160172
Local ready
Direct docking supported
E3L033865
BDB033865
US12012467, Example 151
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CN)c1ccccc1)C1CCCC1
C37H50N6O4
642.845000
ZMGYROQRVKSWRL-SUGCFTRWSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680917; PubChem:CID149529158
Local ready
Direct docking supported
E3L033866
BDB033866
US12012467, Example 152
CCC(=O)N[C@@H](Cc1nc2ccccc2s1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)NC(c1ccccc1)c1ccccc1)[C@@H](C)CC
C38H48N6O4S
684.907000
NSDIHPCVCFNPOT-CJYIORQLSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680920; PubChem:CID142442785
Local ready
Direct docking supported
E3L033867
BDB033867
US12012467, Example 153
CCC(=O)N[C@@H](Cc1nc2cc(Cl)ccc2s1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)NC(c1ccccc1)c1ccccc1)[C@@H](C)CC
C38H47ClN6O4S
719.352000
AVNDUIZHUPLKTP-ARZPJMKWSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680921; PubChem:CID142442362
Local ready
Direct docking supported
E3L033868
BDB033868
US12012467, Example 154
CCC(=O)N[C@@H](Cc1nc2ccccc2o1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)NC(c1ccccc1)c1ccccc1)[C@@H](C)CC
C38H48N6O5
668.839000
XKAYJONYUMYUDS-CJYIORQLSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680922; PubChem:CID161732560
Local ready
Direct docking supported
E3L033869
BDB033869
US12012467, Example 155
CCC(=O)N[C@@H](Cc1nc2cc(Cl)ccc2o1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)NC(c1ccccc1)c1ccccc1)[C@@H](C)CC
C38H47ClN6O5
703.284000
DBIKOCSNJBJFKC-ARZPJMKWSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680923; PubChem:CID142442406
Local ready
Direct docking supported
E3L033870
BDB033870
US12012467, Example 156
CCC(=O)N[C@@H](Cc1nc2ccc(Cl)cc2o1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)NC(c1ccccc1)c1ccccc1)[C@@H](C)CC
C38H47ClN6O5
703.284000
XYIDKMKQHGARFU-HLVZCZPHSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680924; PubChem:CID171991092
Local ready
Direct docking supported
E3L033871
BDB033871
US12012467, Example 157
CCC(=O)N[C@@H](Cc1nc2ccc(OC)cc2o1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)NC(c1ccccc1)c1ccccc1)[C@@H](C)CC
C39H50N6O6
698.865000
UVCXBIAZXPAAJE-HGVAOISJSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680925; PubChem:CID142442370
Local ready
Direct docking supported
E3L033872
BDB033872
US12012467, Example 158
CCC(=O)N[C@@H](Cc1nc2ccc(Cl)cc2s1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)NC(c1ccc(F)cc1)c1ccc(F)cc1)C1CCCC1
C39H45ClF2N6O4S
767.343000
WEKDUUJZJFCALJ-QOIMHMMJSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680930; PubChem:CID171991093
Local ready
Direct docking supported
E3L033873
BDB033873
US12012467, Example 159
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@H]1CNCc2ccccc21)C1CCCC1
C38H50N6O4
654.856000
ZASFKWXLGPNVQD-TUCRWICHSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680933; PubChem:CID142442637
Local ready
Direct docking supported
E3L033874
BDB033874
US12012467, Example 160
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]1CNCc2ccccc21)C1CCCC1
C38H50N6O4
654.856000
ZASFKWXLGPNVQD-OXAGCLFZSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680934; PubChem:CID171991094
Local ready
Direct docking supported
E3L033875
BDB033875
US12012467, Example 161
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](c1ccccc1)c1cn(CCN)nn1)C1CCCC1
C40H53N9O4
723.923000
IRQDLXBYEBBWGS-SEXBWERRSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680935; PubChem:CID142442360
Local ready
Direct docking supported
E3L033876
BDB033876
US12012467, Example 39
CCC(=O)N[C@@H](Cc1nc2ccc(Cl)cc2s1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]1CNCc2ccccc21)C1CCCC1
C35H46ClN7O4S
696.318000
HBYYEEIAZQXYCS-PJGOFDOSSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680936; PubChem:CID142442437
Local ready
Direct docking supported
E3L033877
BDB033877
US12012467, Example 162
CCC(=O)N[C@@H](Cc1nc2ccc(Cl)cc2s1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@H]1CNCc2ccccc21)C1CCCC1
C35H46ClN7O4S
696.318000
HBYYEEIAZQXYCS-OAJQQGRKSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680937; PubChem:CID147749774
Local ready
Direct docking supported
E3L033878
BDB033878
US12012467, Example 40
CCC(=O)N[C@@H](Cc1nc2ccc(Cl)cc2s1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN(C)C)C(=O)N[C@@H]1CN(C)Cc2ccccc21)C1CCCC1
C38H52ClN7O4S
738.399000
ZJYJRYZELWYSHU-ZPNDBRHUSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680938; PubChem:CID142442678
Local ready
Direct docking supported
E3L033879
BDB033879
US12012467, Example 163
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]1CCOc2cccc(Cl)c21)C1CCCC1
C38H48ClN5O5
690.285000
QONVMDLXTZMQON-ZALLFBGUSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680939; PubChem:CID142442630
Local ready
Direct docking supported
E3L033880
BDB033880
US12012467, Example 164
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]1CCOc2ccc(Cl)cc21)C1CCCC1
C38H48ClN5O5
690.285000
JRHRYDALNHACJO-MZZRCDJFSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM680940; PubChem:CID142442487
Local ready
Direct docking supported