E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L034021
BDB034021
US12012467, Example 63
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)N[C@H](CNC(=O)C1CCN(C2COC2)CC1)C1CCCCC1
C33H49N5O4S
611.853000
ILJLROAPRAUYNW-WUFINQPMSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM681089; PubChem:CID142442473
Local ready
Direct docking supported
E3L034022
BDB034022
US12012467, Example 84
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)NC(CSc1nncn1C)C1CCCCC1
C27H38N6O2S2
542.775000
NKNDPLCWQLWTQB-HMTLIYDFSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM681090; PubChem:CID171991121
Local ready
Direct docking supported
E3L034023
BDB034023
US12012467, Example 64
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)N[C@H](CNC(=O)C12CCN(CC1)CC2)C1CCCCC1
C32H47N5O3S
581.827000
ZJEBFLBKMSORIQ-IZZNHLLZSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM681091; PubChem:CID149512782
Local ready
Direct docking supported
E3L034024
BDB034024
US12012467, Example 65
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)N[C@H](CNC(=O)c1nnc[nH]1)C1CCCCC1
C27H37N7O3S
539.706000
XOQYOGVHESNIIK-LEWJYISDSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM681092; PubChem:CID171991122
Local ready
Direct docking supported
E3L034025
BDB034025
US12012467, Example 268
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)N[C@H](CNC(=O)c1ncc[nH]1)C1CCCCC1
C28H38N6O3S
538.718000
XLMUKVKZVUPBJS-FCHUYYIVSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM681093; PubChem:CID142442386
Local ready
Direct docking supported
E3L034026
BDB034026
US12012467, Example 66
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)N[C@H](CNC(=O)c1cn(C)cn1)C1CCCCC1
C29H40N6O3S
552.745000
ULPBBWRNOFQADQ-XZOQPEGZSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM681094; PubChem:CID142442500
Local ready
Direct docking supported
E3L034027
BDB034027
US12012467, Example 67
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)N[C@H](CNC(=O)c1c[nH]cn1)C1CCCCC1
C28H38N6O3S
538.718000
ISMVUBHEMNTLOH-FCHUYYIVSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM681095; PubChem:CID142442519
Local ready
Direct docking supported
E3L034028
BDB034028
US12012467, Example 68
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)N[C@H](CNC(=O)C1CNC1)C1CCCCC1
C28H41N5O3S
527.735000
LJXSFALABKUFKB-XZOQPEGZSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM681096; PubChem:CID135350741
Local ready
Direct docking supported
E3L034029
BDB034029
US12012467, Example 69
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)N[C@H](CNC(=O)C1CN(C)C1)C1CCCCC1
C29H43N5O3S
541.762000
YLFKRABAROVHTP-BJKOFHAPSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM681097; PubChem:CID171991123
Local ready
Direct docking supported
E3L034030
BDB034030
US12012467, Example 70
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)N[C@H](CNC(=O)C1CCN(CC)CC1)C1CCCCC1
C32H49N5O3S
583.843000
VNXPNBLNZBINCP-RRPNLBNLSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM681098; PubChem:CID164038237
Local ready
Direct docking supported
E3L034031
BDB034031
US12012467, Example 71
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)N[C@H](CNC(=O)C1CCN(C(C)C)CC1)C1CCCCC1
C33H51N5O3S
597.870000
VQVJHIMVQHPVAC-WUFINQPMSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM681099; PubChem:CID153099799
Local ready
Direct docking supported
E3L034032
BDB034032
US12012467, Example 72
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)N[C@H](CNC(=O)C1CCN(CCO)CC1)C1CCCCC1
C32H49N5O4S
599.842000
LIQRLDNWGMETJU-RRPNLBNLSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM681100; PubChem:CID142442754
Local ready
Direct docking supported
E3L034033
BDB034033
US12012467, Example 82
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)N[C@H](Cn1cc(CN)nn1)C1CCCCC1
C27H39N7O2S
525.723000
ADAMVMCLUARSNW-XZOQPEGZSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM681101; PubChem:CID142442615
Local ready
Direct docking supported
E3L034034
BDB034034
US12012467, Example 83
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)N[C@H](Cn1cc(CO)nn1)C1CCCCC1
C27H38N6O3S
526.707000
PTQBFRARYAVSPZ-XZOQPEGZSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM681102; PubChem:CID171991124
Local ready
Direct docking supported
E3L034035
BDB034035
BDBM681103
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)N[C@H](CNS(=O)(=O)C1CCNCC1)C1CCCCC1
C29H45N5O4S2
591.844000
OQIIWYZHAJODEV-LOSJGSFVSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM681103; PubChem:CID135350818
Local ready
Direct docking supported
E3L034036
BDB034036
US12012467, Example 74
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)N[C@H](CNC(=O)C1CCN(CCF)CC1)C1CCCCC1
C32H48FN5O3S
601.833000
KAKSDYLLRMLHMN-RRPNLBNLSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM681104; PubChem:CID142442789
Local ready
Direct docking supported
E3L034037
BDB034037
US12012467, Example 126
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)N[C@H](CNC(=O)C1CCN(CCOCCOCCOCCNC(=O)CCCC[C@@H]2SC[C@@H]3NC(=O)N[C@@H]32)CC1)C1CCCCC1
C48H76N8O8S2
957.318000
FMOKAZZXBIIQGD-KHUVFACJSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM681105; PubChem:CID171991125
Local ready
Direct docking supported
E3L034038
BDB034038
US12012467, Example 127
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)N[C@H](CNC(=O)C1CCN(CCOCCOCCOCCNC(=O)c2ccc3c(c2)C(=O)OC32c3ccc(O)cc3Oc3cc(O)ccc32)CC1)C1CCCCC1
C59H72N6O12S
1089.322000
AELQZSJDIGSZSU-NXWRKTHKSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM681106; PubChem:CID146928100
Local ready
Direct docking supported
E3L034039
BDB034039
US12012467, Example 75
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)N[C@H](CNC(=O)NC1CCN(C)CC1)C1CCCCC1
C31H48N6O3S
584.831000
SGIVZQMPGSZPAX-IZZNHLLZSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM681107; PubChem:CID142442518
Local ready
Direct docking supported
E3L034040
BDB034040
US12012467, Example 76
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)N[C@H](CNS(=O)(=O)C1CCN(C)CC1)C1CCCCC1
C30H47N5O4S2
605.871000
CHGYFVZBKPSDPF-IZZNHLLZSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM681108; PubChem:CID142442837
Local ready
Direct docking supported