E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L035041
BDB035041
US20240368153, Example 10-5
Cc1cc2ncc(C(=O)N(Cc3ccc(C(F)(F)F)cn3)[C@H]3CCCc4nccnc43)cc2nc1N
C25H22F3N7O
493.493000
VSRTXQHVPZHROV-NRFANRHFSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703968; PubChem:CID172487124
Local ready
Direct docking supported
E3L035042
BDB035042
US20240368153, Example 10-6
Cc1cc2ncc(C(=O)N(Cc3ccc(C(F)(F)F)cn3)C3CCCc4nccnc43)cc2nc1N
C25H22F3N7O
493.493000
VSRTXQHVPZHROV-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703969; PubChem:CID172487118
Local ready
Direct docking supported
E3L035043
BDB035043
US20240368153, Example 10-7
Cc1cc2ncc(C(=O)N(Cc3ccc(Br)cn3)[C@@H](C)c3ncccn3)cc2nc1N
C22H20BrN7O
478.354000
DPKMKUVJFYPCMO-AWEZNQCLSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703970; PubChem:CID172487098
Local ready
Direct docking supported
E3L035044
BDB035044
US20240368153, Example 10-8
Cc1cc2ncc(C(=O)N(Cc3ccc(Br)cn3)[C@H](C)c3ncccn3)cc2nc1N
C22H20BrN7O
478.354000
DPKMKUVJFYPCMO-CQSZACIVSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703971; PubChem:CID172487109
Local ready
Direct docking supported
E3L035045
BDB035045
US20240368153, Example 10-9
Cc1cc(N)nc2cc(C(=O)N(Cc3ccc(C(F)(F)F)cn3)[C@H]3CCCc4nccnc43)cnc12
C25H22F3N7O
493.493000
AMNPCLREWCIOTK-FQEVSTJZSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703972; PubChem:CID172487093
Local ready
Direct docking supported
E3L035046
BDB035046
US20240398811, Example 29
Cc1cc(-c2cnc(NCc3c(Cl)ccc4occc34)n3cc(C#N)nc23)n(C)n1
C21H16ClN7O
417.860000
PDWYVOPYDRGEFP-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM706963; PubChem:CID172538432
Local ready
Direct docking supported
E3L035047
BDB035047
US20240398811, Example 30
Cc1cc(-c2cnc(NCc3cccc4occc34)n3cc(C#N)nc23)n(C)n1
C21H17N7O
383.415000
IQEGSFXKOHVTHB-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM706964; PubChem:CID172538433
Local ready
Direct docking supported
E3L035048
BDB035048
BDBM706996
COc1ccc(OC2CCC2)cc1S(=O)(=O)Nc1noc2cc(Cn3cccn3)cc(OC)c12
C23H24N4O6S
484.534000
WXHWPJMDADBNSX-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM706996; PubChem:CID167301208
Local ready
Direct docking supported
E3L035049
BDB035049
BDBM706997
COc1ccc(N2CCC2)cc1S(=O)(=O)Nc1noc2cc(Cn3cccn3)cc(OC)c12
C22H23N5O5S
469.523000
BTZRVQBAJSUADJ-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM706997; PubChem:CID167300944
Local ready
Direct docking supported
E3L035050
BDB035050
BDBM706998
C#Cc1ccc(OC)c(S(=O)(=O)Nc2noc3cc(Cn4cccn4)cc(OC)c23)c1
C21H18N4O5S
438.465000
BAIIVDBVHNQABT-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM706998; PubChem:CID167300935
Local ready
Direct docking supported
E3L035051
BDB035051
BDBM706999
C#Cc1cc(OC)c(S(=O)(=O)Nc2noc3cc(Cn4cccn4)cc(OC)c23)c(OC)c1
C22H20N4O6S
468.491000
HWPRUSYNAFZYEU-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM706999; PubChem:CID167301188
Local ready
Direct docking supported
E3L035052
BDB035052
BDBM707000
COc1ccc(N2CCN(C)CC2)cc1S(=O)(=O)Nc1noc2cc(Cn3cccn3)cc(OC)c12
C24H28N6O5S
512.592000
FWWDJZIPWXYPCM-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM707000; PubChem:CID167300945
Local ready
Direct docking supported
E3L035053
BDB035053
BDBM707001
COc1ccc(N2CCOCC2)cc1S(=O)(=O)Nc1noc2cc(Cn3cccn3)cc(OC)c12
C23H25N5O6S
499.549000
OQTIRVDTSMIQIG-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM707001; PubChem:CID167300959
Local ready
Direct docking supported
E3L035054
BDB035054
BDBM707002
COc1ccc(C#CC2CC2)cc1S(=O)(=O)Nc1noc2cc(Cn3cccn3)cc(OC)c12
C24H22N4O5S
478.530000
PFSVFCYUJXBOTA-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM707002; PubChem:CID167300953
Local ready
Direct docking supported
E3L035055
BDB035055
BDBM707003
COc1ccc(C#CC2CC2)cc1S(=O)(=O)NC(=O)c1cc2ccc(N(C)C)cc2o1
C23H22N2O5S
438.505000
OUMPLWXCZRSAPR-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM707003; PubChem:CID167300966
Local ready
Direct docking supported
E3L035056
BDB035056
BDBM707004
CC#Cc1cc(OC)c(S(=O)(=O)Nc2noc3cc(Cn4cccn4)cc(OC)c23)c(OC)c1
C23H22N4O6S
482.518000
SJBOEQBAYMLAMT-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM707004; PubChem:CID167300961
Local ready
Direct docking supported
E3L035057
BDB035057
BDBM707005
COc1cc(C#CC2CC2)cc(OC)c1S(=O)(=O)Nc1noc2cc(Cn3cccn3)cc(OC)c12
C25H24N4O6S
508.556000
VQOBATQZJVXPEU-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM707005; PubChem:CID167300952
Local ready
Direct docking supported
E3L035058
BDB035058
BDBM707006
C#Cc1ccc(S(=O)(=O)Nc2noc3cc(Cn4cccn4)cc(OC)c23)c(OC)c1
C21H18N4O5S
438.465000
HVIQAUBZRJFCTH-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM707006; PubChem:CID167301480
Local ready
Direct docking supported
E3L035059
BDB035059
BDBM707007
COc1cc(C#CC2CC2)ccc1S(=O)(=O)Nc1noc2cc(Cn3cccn3)cc(OC)c12
C24H22N4O5S
478.530000
WUIIBBKYBLNFBN-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM707007; PubChem:CID167300929
Local ready
Direct docking supported
E3L035060
BDB035060
BDBM707008
CC#Cc1ccc(OC)c(S(=O)(=O)Nc2noc3cc(Cn4cccn4)cc(OC)c23)c1
C22H20N4O5S
452.492000
FMLMHVAEIOSYDV-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM707008; PubChem:CID167300926
Local ready
Direct docking supported