E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L035001
BDB035001
US20240368153, Example 8-2
Nc1nc2cc(CNC(=O)c3ccncn3)[nH]c2cc1Br
C13H11BrN6O
347.176000
YKTLILLSZWVEMX-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703928; PubChem:CID165416399
Local ready
Direct docking supported
E3L035002
BDB035002
6-Methyl-1H-pyrrolo[3,2-b]pyridin-5-amine
Cc1cc2[nH]ccc2nc1N
C8H9N3
147.181000
LBMHFUAOAMCZOE-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703929; PubChem:CID142405777
Local ready
Direct docking supported
E3L035003
BDB035003
US20240368153, Example 9-2
Nc1nc2cc[nH]c2cc1C1CC1
C10H11N3
173.219000
LDVSIUFJJMVFBM-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703930; PubChem:CID165416403
Local ready
Direct docking supported
E3L035004
BDB035004
6-(Trifluoromethyl)-1H-pyrrolo[3,2-b]pyridin-5-amine
Nc1nc2cc[nH]c2cc1C(F)(F)F
C8H6F3N3
201.151000
OOMWJOPTHRPGAN-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703931; PubChem:CID166460415
Local ready
Direct docking supported
E3L035005
BDB035005
US20240368153, Example 11-1
Nc1ccc2c(n1)CN(c1cccnc1)CC2
C13H14N4
226.283000
ILYLOROMTHLRFK-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703932; PubChem:CID166460441
Local ready
Direct docking supported
E3L035006
BDB035006
US20240368153, Example 11-2
Nc1ccc2c(n1)CN(c1cncc(Oc3ccccc3)c1)CC2
C19H18N4O
318.380000
LXCWBXOJOCUQDX-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703933; PubChem:CID166460559
Local ready
Direct docking supported
E3L035007
BDB035007
US20240368153, Example 11-3
Cn1cc(N2CCc3cc(F)c(N)nc3C2)cn1
C12H14FN5
247.277000
FYGXXGYMZFMPFD-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703934; PubChem:CID166460478
Local ready
Direct docking supported
E3L035008
BDB035008
US20240368153, Example 11-4
Cn1ncc(N2CCc3cc(F)c(N)nc3C2)c1-c1ccccc1C#N
C19H17FN6
348.385000
KNQYOZMHHMDGOW-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703935; PubChem:CID166460425
Local ready
Direct docking supported
E3L035009
BDB035009
US20240368153, Example 12-1
Nc1nc2cc(NC(=O)c3ccccc3)[nH]c2cc1Br
C14H11BrN4O
331.173000
GXYOUAQZIMSARE-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703936; PubChem:CID172487059
Local ready
Direct docking supported
E3L035010
BDB035010
US20240368153, Example 12-2
Cc1cc2[nH]c(NC(=O)c3ccccc3)cc2nc1N
C15H14N4O
266.304000
OXXGGMFHJBIYCE-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703937; PubChem:CID166460542
Local ready
Direct docking supported
E3L035011
BDB035011
US20240368153, Example 12-3
Nc1ccc2[nH]c(NC(=O)c3ccccc3)cc2n1
C14H12N4O
252.277000
CFZZOSGNZOMVQC-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703938; PubChem:CID166460401
Local ready
Direct docking supported
E3L035012
BDB035012
US20240368153, Example 12-4
Nc1nc2cc(NC(=O)c3ccccc3F)[nH]c2cc1Br
C14H10BrFN4O
349.163000
NJFYZDPJAWQZJJ-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703939; PubChem:CID166460534
Local ready
Direct docking supported
E3L035013
BDB035013
US20240368153, Example 13-1
Cc1cc2[nH]c(-n3cncn3)cc2nc1N
C10H10N6
214.232000
UKYQXCPOQPPYGX-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703940; PubChem:CID166460504
Local ready
Direct docking supported
E3L035014
BDB035014
US20240368153, Example 13-2
Cc1cc2[nH]c(NC=NC(=N)Br)cc2nc1N
C10H11BrN6
295.144000
VJNCWUGHEUEDTL-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703941; PubChem:CID172487072
Local ready
Direct docking supported
E3L035015
BDB035015
BDBM703942
C=C(Br)N=CN(C)c1cc2nc(N)c(C)cc2[nH]1
C12H14BrN5
308.183000
APWSVQMFFQSUIV-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB
BindingDB:BDBM703942
Local ready
Direct docking supported
E3L035016
BDB035016
US20240368153, Example 13-4
Cc1cc2[nH]c(N3CC(=O)N(C)C3=O)cc2nc1N
C12H13N5O2
259.269000
ORWCOAICGIORGO-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703943; PubChem:CID166460426
Local ready
Direct docking supported
E3L035017
BDB035017
US20240368153, Example 13-5
Cc1cc2[nH]c(-n3ccn(C)c3=O)cc2nc1N
C12H13N5O
243.270000
NLIADBIQDIOLTN-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703944; PubChem:CID172879049
Local ready
Direct docking supported
E3L035018
BDB035018
US20240368153, Example 13-6
Cc1cc2[nH]c(-n3cc[nH]c3=O)cc2nc1N
C11H11N5O
229.243000
LRTOGUGIIIXYGV-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703945; PubChem:CID172879050
Local ready
Direct docking supported
E3L035019
BDB035019
US20240368153, Example 13-7
Cc1cc2c(nc1N)C=C(N1CC(=O)NC1=O)C2
C12H12N4O2
244.254000
ZLEBEWQEGNKZSN-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703946; PubChem:CID172879051
Local ready
Direct docking supported
E3L035020
BDB035020
US20240368153, Example 14-1
Cc1cc2[nH]c(CN3C(=O)c4ccccc4C3=O)cc2nc1N
C17H14N4O2
306.325000
KBHCOJWCCIBTHS-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703947; PubChem:CID166460507
Local ready
Direct docking supported