E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L034981
BDB034981
US20240368153, Example 3-8
Cc1cc(N)nc2cc(Oc3ccncc3)cnc12
C14H12N4O
252.277000
OFEZWBAFJBQRBU-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703908; PubChem:CID172487054
Local ready
Direct docking supported
E3L034982
BDB034982
US20240368153, Example 4-10
Cc1cc(N)nc2ccc(-c3ccsn3)nc12
C12H10N4S
242.307000
PHLUZXLKNPQVEF-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703909; PubChem:CID166460433
Local ready
Direct docking supported
E3L034983
BDB034983
US20240368153, Example 4-2
Cc1cc(N)nc2ccc(-c3ccccn3)nc12
C14H12N4
236.278000
CDHAUHBEBFYHAM-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703910; PubChem:CID172487094
Local ready
Direct docking supported
E3L034984
BDB034984
US20240368153, Example 4-3
Cc1cc(N)nc2ccc(-c3cccnc3)nc12
C14H12N4
236.278000
WGSSYKREOPIKHK-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703911; PubChem:CID172487123
Local ready
Direct docking supported
E3L034985
BDB034985
US20240368153, Example 4-4
Cc1cc(N)nc2ccc(-c3cncs3)nc12
C12H10N4S
242.307000
KGKRYQXHLJCQQP-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703912; PubChem:CID166460414
Local ready
Direct docking supported
E3L034986
BDB034986
US20240368153, Example 4-5
Cc1cc(N)nc2ccc(-c3cnn(C)c3)nc12
C13H13N5
239.282000
ZLHKROVCLZBPLZ-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703913; PubChem:CID172487104
Local ready
Direct docking supported
E3L034987
BDB034987
US20240368153, Example 4-6
Cc1cc(N)nc2ccc(-c3cnsc3)nc12
C12H10N4S
242.307000
PGPUVCKLYDWKLT-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703914; PubChem:CID172487060
Local ready
Direct docking supported
E3L034988
BDB034988
US20240368153, Example 4-7
Cc1cc(N)nc2ccc(-c3ccccc3F)nc12
C15H12FN3
253.280000
IXLWCMCAMKOUDZ-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703915; PubChem:CID172487116
Local ready
Direct docking supported
E3L034989
BDB034989
US20240368153, Example 4-9
Cc1cc(N)nc2ccc(-c3ccc(F)cc3)nc12
C15H12FN3
253.280000
FKKCRKQBRSYTDP-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703916; PubChem:CID172487055
Local ready
Direct docking supported
E3L034990
BDB034990
US20240368153, Example 5-1
CNc1ccc2nc(N)cc(C)c2n1
C10H12N4
188.234000
YQJHARXNCXOSEB-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703917; PubChem:CID172487108
Local ready
Direct docking supported
E3L034991
BDB034991
US20240368153, Example 5-3
Cc1cc(N)nc2ccc(NC3CCC3)nc12
C13H16N4
228.299000
MEJQMLQMZHMAFM-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703918; PubChem:CID172487088
Local ready
Direct docking supported
E3L034992
BDB034992
US20240368153, Example 6-1
Nc1ccc2cc(Cl)ncc2n1
C8H6ClN3
179.610000
AEOPGNCYKAWFQV-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703919; PubChem:CID166460514
Local ready
Direct docking supported
E3L034993
BDB034993
US20240368153, Example 7-1
Cc1cc(N)nc2cc(CNC(=O)c3ccccc3)cnc12
C17H16N4O
292.342000
GQXAOBKXAXYUPB-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703920; PubChem:CID168269924
Local ready
Direct docking supported
E3L034994
BDB034994
US20240368153, Example 7-2
Cc1cc(N)nc2cc(CNC(=O)c3ccncn3)cnc12
C15H14N6O
294.318000
ZQCGSAGDRXLPTI-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703921; PubChem:CID168293783
Local ready
Direct docking supported
E3L034995
BDB034995
US20240368153, Example 7-3
Cc1cc(N)nc2cc(CNC(=O)c3cc(O)ncn3)cnc12
C15H14N6O2
310.317000
VILAVLZSCXAUJY-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703922; PubChem:CID172487081
Local ready
Direct docking supported
E3L034996
BDB034996
US20240368153, Example 7-4
Cc1cc(N)nc2cc(CNC(=O)c3cc(NC4CC4)ncn3)cnc12
C18H19N7O
349.398000
WMSJPCNGPBZDNE-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703923; PubChem:CID172487083
Local ready
Direct docking supported
E3L034997
BDB034997
US20240368153, Example 7-5
CC(=O)N(Cc1cnc2c(C)cc(N)nc2c1)c1ccc2ccccc2c1C#N
C23H19N5O
381.439000
BROMFAOGPKKZCJ-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703924; PubChem:CID166460461
Local ready
Direct docking supported
E3L034998
BDB034998
US20240368153, Example 7-6
Cc1cc(N)nc2cc(CN3C(=O)c4ccccc4C3=O)cnc12
C18H14N4O2
318.336000
HTMCWONMYHXZSF-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703925; PubChem:CID166460510
Local ready
Direct docking supported
E3L034999
BDB034999
US20240368153, Example 7-7
Cc1cc(N)nc2cc(C(C#N)N3C(=O)c4ccccc4C3=O)cnc12
C19H13N5O2
343.346000
BBEOSVJUCBELTQ-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703926; PubChem:CID166460497
Local ready
Direct docking supported
E3L035000
BDB035000
US20240368153, Example 8-1
Nc1nc2cc(CNC(=O)c3ccccc3)[nH]c2cc1Br
C15H13BrN4O
345.200000
PFJAROFBNFXXIE-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703927; PubChem:CID172487063
Local ready
Direct docking supported