E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L035021
BDB035021
US20240368153, Example 14-2
CC(=O)N(Cc1cc2nc(N)c(C)cc2[nH]1)c1ccc2ccccc2c1C#N
C22H19N5O
369.428000
SRFXFLSPHHYVFE-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703948; PubChem:CID166460472
Local ready
Direct docking supported
E3L035022
BDB035022
US20240368153, Example 14-3
CC(=O)NCc1cc2nc(N)c(C)cc2[nH]1
C11H14N4O
218.260000
RGXQSWHBKILFMU-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703949; PubChem:CID166460525
Local ready
Direct docking supported
E3L035023
BDB035023
US20240368153, Example 14-4
CC(=O)N(C)Cc1cc2nc(N)c(C)cc2[nH]1
C12H16N4O
232.287000
DRNMZEZHPOWYGC-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703950; PubChem:CID166460421
Local ready
Direct docking supported
E3L035024
BDB035024
US20240368153, Example 14-5
Cc1cc2[nH]c(C(C#N)N3C(=O)c4ccccc4C3=O)cc2nc1N
C18H13N5O2
331.335000
VVGLLHBPUULIFD-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703951; PubChem:CID166460424
Local ready
Direct docking supported
E3L035025
BDB035025
US20240368153, Example 14-6
Cc1cc2[nH]c(CN3CCc4ccccc4C3=O)cc2nc1N
C18H18N4O
306.369000
CJVPMAFUDRCSAN-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703952; PubChem:CID166460492
Local ready
Direct docking supported
E3L035026
BDB035026
US20240368153, Example 14-7
Cc1cc2[nH]c(Cn3ccc4ccccc4c3=O)cc2nc1N
C18H16N4O
304.353000
LLIVSJBAWSHGHR-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703953; PubChem:CID166460405
Local ready
Direct docking supported
E3L035027
BDB035027
US20240368153, Example 15-1
Cc1cc2c(cc(CNC(=O)c3ccccc3)n2C2CC2)nc1N
C19H20N4O
320.396000
VISXTHYKJVPMPV-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703954; PubChem:CID166460552
Local ready
Direct docking supported
E3L035028
BDB035028
US20240368153, Example 15-2
CC(=O)N1CCC(=O)n2c(cc3nc(N)c(C)cc32)C1
C14H16N4O2
272.308000
ZTGBRNOPPKWPHC-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703955; PubChem:CID172487101
Local ready
Direct docking supported
E3L035029
BDB035029
US20240368153, Example 15-3
Cc1cc2c(cc(CNC(=O)c3ccccc3)n2C)nc1N
C17H18N4O
294.358000
VMKVCMLJEAZPBI-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703956; PubChem:CID172487065
Local ready
Direct docking supported
E3L035030
BDB035030
US20240368153, Example 15-4
C#Cc1c(CNC(=O)c2ccccc2)[nH]c2cc(C)c(N)nc12
C18H16N4O
304.353000
XPQABPZCZXQLOB-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703957; PubChem:CID166460467
Local ready
Direct docking supported
E3L035031
BDB035031
US20240368153, Example 15-5
CC(=O)c1c(CNC(=O)c2ccccc2)[nH]c2cc(C)c(N)nc12
C18H18N4O2
322.368000
CJPBVLSJNVWBJW-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703958; PubChem:CID166460479
Local ready
Direct docking supported
E3L035032
BDB035032
US20240368153, Example 15-6
Cc1cc2[nH]c(CNC(=O)c3ccccc3)c(C#N)c2nc1N
C17H15N5O
305.341000
QUVGHZVWWAPAJQ-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703959; PubChem:CID166460522
Local ready
Direct docking supported
E3L035033
BDB035033
BDBM703960
CC(=O)NCc1cc2nc(N)c(C)cc2n1C(C)=O
C13H16N4O2
260.297000
ZOYLZGNVMGRXLX-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703960; PubChem:CID166460487
Local ready
Direct docking supported
E3L035034
BDB035034
US20240368153, Example 15-8
CC(=O)N(C)Cc1cc2nc(N)c(C)cc2n1C(C)=O
C14H18N4O2
274.324000
ABXMLWXQJFJWIU-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703961; PubChem:CID166460458
Local ready
Direct docking supported
E3L035035
BDB035035
US20240368153, Example 16-1
Cc1cc2sc(CNC(=O)c3ccccc3)cc2nc1N
C16H15N3OS
297.383000
FUBWQWVGELGMLQ-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703962; PubChem:CID166460526
Local ready
Direct docking supported
E3L035036
BDB035036
US20240368153, Example 10-1
Cc1cc2[nH]c(C(=O)N(Cc3ccc(Br)cn3)[C@H](C)c3ncccn3)cc2nc1N
C21H20BrN7O
466.343000
JKULQMNXTLIXNY-CYBMUJFWSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703963; PubChem:CID172487106
Local ready
Direct docking supported
E3L035037
BDB035037
US20240368153, Example 10-11
Cc1cc(N)nc2cc(C(=O)N(Cc3ccc(Br)cn3)[C@@H](C)c3ncccn3)cnc12
C22H20BrN7O
478.354000
LPMWBYYNVIELIY-AWEZNQCLSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703964; PubChem:CID166460558
Local ready
Direct docking supported
E3L035038
BDB035038
US20240368153, Example 10-2
Cc1cc2[nH]c(C(=O)N(Cc3ccc(Br)cn3)[C@@H](C)c3ncccn3)cc2nc1N
C21H20BrN7O
466.343000
JKULQMNXTLIXNY-ZDUSSCGKSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703965; PubChem:CID172487052
Local ready
Direct docking supported
E3L035039
BDB035039
US20240368153, Example 10-3
Cc1cc2[nH]c(C(=O)N(Cc3ccc(C(F)(F)F)cn3)C3CCCc4nccnc43)cc2nc1N
C24H22F3N7O
481.482000
KIEKGAQRUFUIEQ-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703966; PubChem:CID172487121
Local ready
Direct docking supported
E3L035040
BDB035040
US20240368153, Example 10-4
Cc1cc2[nH]c(C(=O)N(Cc3ccc(C(F)(F)F)cn3)[C@H]3CCCc4nccnc43)cc2nc1N
C24H22F3N7O
481.482000
KIEKGAQRUFUIEQ-FQEVSTJZSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703967; PubChem:CID172487087
Local ready
Direct docking supported