E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L036061
BDB036061
US20250073340, Example 25
COc1cc(C(=O)N2CCC[C@@H](CC#Cc3cccc4c3CN(C3CCC(=O)NC3=O)C4=O)C2)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@@]2(CNc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C52H53Cl2FN6O6
947.936000
BZUIBNLKEGFPOY-JALZAXBESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM725178; PubChem:CID164591756
Local ready
Direct docking supported
E3L036062
BDB036062
US20250073340, Example 26
COc1cc(N2CCC([C@@H]3C[C@H]3C#Cc3cccc4c3CN(C3CCC(=O)NC3=O)C4=O)CC2)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@@]2(CNc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C53H55Cl2FN6O5
945.964000
MTJRYKKDHIGCTE-DSLJZEAASA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM725179; PubChem:CID164591760
Local ready
Direct docking supported
E3L036063
BDB036063
US20250073340, Example 27
COc1cc(N2CCC([C@H]3C[C@@H]3C#Cc3cccc4c3CN(C3CCC(=O)NC3=O)C4=O)CC2)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@@]2(CNc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C53H55Cl2FN6O5
945.964000
MTJRYKKDHIGCTE-CXVSLVQASA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM725180; PubChem:CID164592050
Local ready
Direct docking supported
E3L036064
BDB036064
US20250073340, Example 28
COc1cc(N2CCC[C@H](C#Cc3cccc4c3CN([C@H]3CCC(=O)NC3=O)C4=O)C2)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@@]2(CNc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C50H51Cl2FN6O5
905.899000
FIWNKXFTVUEKIU-WVLVJXLASA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM725181; PubChem:CID164592042
Local ready
Direct docking supported
E3L036065
BDB036065
US20250073340, Example 29
COc1cc(N2CCC[C@H](C#Cc3cccc4c3CN([C@@H]3CCC(=O)NC3=O)C4=O)C2)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@@]2(CNc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C50H51Cl2FN6O5
905.899000
FIWNKXFTVUEKIU-BQRYPEBXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM725182; PubChem:CID164591957
Local ready
Direct docking supported
E3L036066
BDB036066
US20250073340, Example 30
COc1cc(N2CCC[C@@H](C#Cc3cccc4c3CN([C@H]3CCC(=O)NC3=O)C4=O)C2)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@@]2(CNc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C50H51Cl2FN6O5
905.899000
FIWNKXFTVUEKIU-HZHHMLPXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM725183; PubChem:CID164591790
Local ready
Direct docking supported
E3L036067
BDB036067
US20250073340, Example 31
COc1cc(N2CCC[C@@H](C#Cc3cccc4c3CN([C@@H]3CCC(=O)NC3=O)C4=O)C2)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@@]2(CNc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C50H51Cl2FN6O5
905.899000
FIWNKXFTVUEKIU-QGPPMENASA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM725184; PubChem:CID164591887
Local ready
Direct docking supported
E3L036068
BDB036068
US20250073340, Example 32
COc1cc(C(=O)N[C@H]2CCC[C@@H](C#Cc3cccc4c3CN(C3CCC(=O)NC3=O)C4=O)C2)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@@]2(CNc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C52H53Cl2FN6O6
947.936000
WDDAMBWSYNNFML-HSZWLBHHSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM725185; PubChem:CID164591782
Local ready
Direct docking supported
E3L036069
BDB036069
US20250073340, Example 33
COc1cc(C(=O)N[C@@H]2CCC[C@H](C#Cc3cccc4c3CN(C3CCC(=O)NC3=O)C4=O)C2)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@@]2(CNc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C52H53Cl2FN6O6
947.936000
WDDAMBWSYNNFML-HVSALXPMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM725186; PubChem:CID164592081
Local ready
Direct docking supported
E3L036070
BDB036070
US20250073340, Example 34
COc1cc(C(=O)N[C@@H]2CCC[C@@H](C#Cc3cccc4c3CN(C3CCC(=O)NC3=O)C4=O)C2)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@@]2(CNc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C52H53Cl2FN6O6
947.936000
WDDAMBWSYNNFML-OOEVOJHYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM725187; PubChem:CID164591785
Local ready
Direct docking supported
E3L036071
BDB036071
US20250073340, Example 35
COc1cc(C(=O)N[C@H]2CCC[C@H](C#Cc3cccc4c3CN(C3CCC(=O)NC3=O)C4=O)C2)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@@]2(CNc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C52H53Cl2FN6O6
947.936000
WDDAMBWSYNNFML-PZFCOGBCSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM725188; PubChem:CID164591890
Local ready
Direct docking supported
E3L036072
BDB036072
US20250073340, Example 36
COc1cc(C(=O)N2CCCC[C@@H]2CCC#Cc2cccc3c2CN([C@@H]2CCC(=O)NC2=O)C3=O)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@@]2(CNc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C53H55Cl2FN6O6
961.963000
IXYOOVPYBMKDJC-ZANOWXKTSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM725189; PubChem:CID164591952
Local ready
Direct docking supported
E3L036073
BDB036073
US20250073340, Example 37
COc1cc(C(=O)N2CCCC[C@@H]2CCC#Cc2cccc3c2CN([C@H]2CCC(=O)NC2=O)C3=O)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@@]2(CNc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C53H55Cl2FN6O6
961.963000
IXYOOVPYBMKDJC-WYEFBMHZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM725190; PubChem:CID164591781
Local ready
Direct docking supported
E3L036074
BDB036074
US20250073340, Example 38
COc1cc(C(=O)N2CCCC[C@H]2CCC#Cc2cccc3c2CN([C@@H]2CCC(=O)NC2=O)C3=O)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@@]2(CNc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C53H55Cl2FN6O6
961.963000
IXYOOVPYBMKDJC-NJCIWUJVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM725191; PubChem:CID164592135
Local ready
Direct docking supported
E3L036075
BDB036075
US20250073340, Example 39
COc1cc(C(=O)N2CCCC[C@H]2CCC#Cc2cccc3c2CN([C@H]2CCC(=O)NC2=O)C3=O)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@@]2(CNc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C53H55Cl2FN6O6
961.963000
IXYOOVPYBMKDJC-VIRNSURXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM725192; PubChem:CID164591827
Local ready
Direct docking supported
E3L036076
BDB036076
US20250073340, Example 42
COc1cc(C(=O)N2CCC3(CC2)CC(C#Cc2cccc4c2CN(C2CCC(=O)NC2=O)C4=O)C3)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@@]2(CNc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C54H55Cl2FN6O6
973.974000
PSDVCWAVZUVVAE-SOHRZNMCSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM725193; PubChem:CID164592000
Local ready
Direct docking supported
E3L036077
BDB036077
US20250073340, Example 43
COc1cc(C(=O)N2CCC3(CC2)C[C@H]3C#Cc2cccc3c2CN(C2CCC(=O)NC2=O)C3=O)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@@]2(CNc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C53H53Cl2FN6O6
959.947000
OAFXZDOTHLLNQB-FKQIRFKFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM725194; PubChem:CID164592072
Local ready
Direct docking supported
E3L036078
BDB036078
US20250073340, Example 44
COc1cc(C(=O)N2CCC3(CC2)C[C@@H]3C#Cc2cccc3c2CN(C2CCC(=O)NC2=O)C3=O)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@@]2(CNc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C53H53Cl2FN6O6
959.947000
OAFXZDOTHLLNQB-JLIFDDDZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM725195; PubChem:CID164591910
Local ready
Direct docking supported
E3L036079
BDB036079
US20250073340, Example 48
COc1cc(C(=O)N2CC[C@H](C#Cc3cccc4c3CN(C3CCC(=O)NC3=O)C4=O)C2)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@@]2(CNc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C50H49Cl2FN6O6
919.882000
OKEWLZLGSGEXPQ-QPJXBYKYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM725196; PubChem:CID164592165
Local ready
Direct docking supported
E3L036080
BDB036080
US20250073340, Example 49
COc1cc(C(=O)N2CC[C@@H](C#Cc3cccc4c3CN(C3CCC(=O)NC3=O)C4=O)C2)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@@]2(CNc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C50H49Cl2FN6O6
919.882000
OKEWLZLGSGEXPQ-JFTJSALISA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM725197; PubChem:CID164591806
Local ready
Direct docking supported